Contig Data
morexGenes
Links



Map Locations of contig_243068 (5413 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_243068

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34262 2 2321 bp MLOC_34262.1 Available Available LOC_Os12g04500.1, FRAME:+3, EVALUE:8e-80, 13112.m00431 protein response regulator receiver domain containing protein
MLOC_34261 1 669 bp MLOC_34261.1 Available Available None





CDS Structure of MLOC_34262






CDS Structure of MLOC_34261






Contig Sequence (5413 bp)

>contig_243068 5413 assembly3_WGSMorex_rbca.fasta
TTTGTCAATCTTAAATTATGTATGTGCTATGTTTATCTCGCTTGTGAAACGCTTAGATGC
GCTTCTTTCTCTTTTGGGGCATCGCCCCCTAAATAGGAAATGACCGCATCTTAGTCGTTA
CACCAGGCCTGAGCTCGGATGCGAACGTGGTTGGAGGTGTGGCGTTCGTCAGTCCGGTGC
TACACTGTAGAGTGTGGCACCTGACTATCGGGCGCTATATAAAAGGGTAAAAAATGACGC
GGGATTTATTTTGTGAATTTAGTACGTCAATAAATCAATTTTGTCCATTTTACAACTCGC
GCAGAGCCCGTCAACCACGAAAACTGGACACACAGTTTCCGACACATAAGTTTAAGGGAA
ACGTTTCCCAGCGGTGGTCCCGTGCGGGTCGTGCGAGGGACACCCCCCCCCCCTTCCTCT
GCTACGAGGCGTCATTTTTTGCTGCAACTGTTATCATTTTTTTGCTACTACCGACATGAA
TTTTGTTATATCCATAGTGGCGGAGTTGCGACGGCGACGACCATTTTTTCTGTTTTGCTA
CAACCCTTGGTAATTTTTTGCTACTACCGACGACGGAATTTGCTACATCCATGATGGCGG
AGCTGCGACGGCGACGACCATTTTTTTTCCGCTGCAACCGGTTTGATTTTTGTTACAACC
GTTATCAATTTTTGCTACAGTTGTTCACTAAAAAAAGGTACATACACGATCGTCAGAGTT
GCAACCCGAGTTTATCGGATTGTTTTACTACAACCCATATTTTATTTTGCTACCGCGCAT
CATCAACTTCGTTTTTTAGTTACGACGACGTTGATTTTTTTTTCTATAACCATGTCTTTG
TTGTATTCATGACCGAAATTTCCTACATCGCTGTTTGTTTTTGCTACCATCGAGAATTTT
TGCTGCATGGATAGATCTAACGGTCAAATAAGATTCAATGTGACGGCTCGCATGCGACCG
ATCAAAAGTTTTGGCCGACGCGTCAGCACAGATCAGTATCCTAACTTTAAAGAATTTTTT
TTAGGGAAAGCAGAAAAGGAAGAAAAGGAAACACACAGAGAGTCACACACGGACACGGCG
CAGAATCCCCGGTGTGCGCACCTGCGAACAGTTGGCTGTACCGTACCACGCGTCGACGTC
GCAGCACTTACGCACGCGACGATACAGAATCTCCCGCGCGCTTGCGCTCCCACTTGCAAC
GAACTGGCCACGACGCCCACCCAATCAGCCCATGGCATGGCGCATCGCGGCACATCACAT
CACATCACAGGGAAACGGCGCTTTCGGGGCGATCGGCAGCGGATACGACGCGATCCCCGG
CAGTACTAAGAAGCAGATGGTCGCGGGGCGGGGGTGGAAAGCGACACGATATCACGAGGC
CCACGCGCCCGGATCCTCGAACCGCTTCGGCTTCCGATCGCCTCGCGGGATGGGATGGGA
TGCGATGCGATCGTGTTGGGGATTTGGTGGGGGAATCCATCGATCGTCGGGTCAGGACGG
TATCCAAGTTGGTGCGGCGCGGGGCGGTGCTGCTACTGCAAGTCTGCAACTTCAGAGTCG
AGAGAAGACATGGCAACTCCCAATCCGGGGATATGCAAACTGCCAACCTGATTTTTTATG
TTCTACTGTACTAGGGTGGCTAGCTCAGGTATGCTGACTTCAGTTAGCAGCTATTCTATT
CTTAATCTTTGACTTGAACAAACATATCAAGTCCTGGCAAAAAAAAACTGAGCACGGCAA
GGATTTGCCATGCTAAAAAATCCGACATCACACTTGTAACGAAACATCATCGCCCACACC
CTTTCAAGATACAATCTGCTGAAGAAATTTCCATACTCGCAACAACATTAATTGCCATCC
CGAGCCGTCAGATTTGCTATGTTTGTTCACTACAAAGAGTTAAAAAAAACATGATTCTTT
TTTTTTGCGGGTTAAATAAAAAAGAAAAAAAAGGAAACATGATTCAAGTGAACTGCCACA
GATTAGCAACACCACGAGCAATGCTACGTCTAGGACTCTTACAAGCCTATTACGGGATAA
ATTTAAGGTGTCAATCTGTGATTGAATCAAACGGGGAGGGAGGGTCCCACCCCCCGAAAA
TCAGGAGGGATGGGGGGCAAGTTTAGTTGGTTGAAAGGTTCGTAAAATCTCTGTAATAAG
GCCGTAGATGTAGCATTTTTGGCAACACCACATACAGACTGCTTGGGGGCTTGCTATGTG
GAGCCACGTAACTCGCAGCTGGTCGGAAGACGTCTGCACCGGGCAGGAACCAACTAGTGA
TGTGCCACCAACAGATTTCATACAGGGAAGGAGAAAAGAAAAACCAACAGATCAGATGGA
TGCGCATCAAACCGCAAGGTCACACACACCTGACCTGTGGAAGATCTCCTCATCTTTTTC
CGTCTTTACCAAATCGCCGGAAACGACCCAAATCTTCCTTTCAGGTCAGCCGAGCAAGCA
AGAGGACAAGCCAGAAAGAAAGAAAGAAAGGGAACAAGAGAAGATGGTGGGCCATGGCTT
TGCTGTGGCTGATGGGCCTGCCAGGTCTATTCTATCGTGGAGTCAATTCATGGCAAGATT
TGGAGGAAATCTGGCCCGGATCTTGCTTTCCATGAGGCGGGATTTCCTTTGGTCATCACA
CTTGTTTTCTCCACCCACTTTTCCTCCCCACCCTCATAATCATATCTCCCCGGAATCCTT
TTTCATGTGCTTCGGATGCATATAAGCTCCACCCCACCCACACGCCCCTGGAAAGCAAAG
CAAAGGAGGAAGGAGCTCATGCCAAGCGCACACACCGCCTGCCTTTCCTCTACCACTCTT
GCTTTCTCCTCTAGCATCCACCTCCTCCATCACACAAAACACACGCTCTCTATCTTCTCC
GATGGCGGTGGCGGCGATCGCAGAGGCTCCGTTCCATGTCTTGGCCGTGGATGACAGCGT
CCTTGACAGGAAGCTCATCGAGAGGCTCCTCAAGACATCTTCGTTCCAAGGTACTCATCA
ATTTCATTTGCAGCATAGCAAGTTGTGTTTCCTGCCATGGCATGGCATCTGAGGCAGAGT
CTCTCTTTGTTTCTGCAGTTACCACTGTGGATTCTGGGACCAAGGCTCTCCAGTTCTTGG
GGCTCCATGCCGAGGACGCCTCCATTTCCTCTGTCCATGCGGACCAGCTGGTAAGTAGAT
AGATGGTTTATCATGCGCCGCAGCCACAGTACCGGTGCTCTCAAACTGTTTCTGATTTGA
TTAATTCTGGGTTTGGTCCTGAGCAGGACGTCGAGGTGAACGTGAACCTCATCATCACTG
ACTACTGCATGCCTGGGATGACAGGATACGATCTGCTCAAGAAGATCAAGGTACCCACCC
ACCCCTTCTTTTTACCTGAATGAAATCTTCTTCTATTCCCGCAAAAAGAAGAAAAAACTT
CTTGCTAGTTGGTTTGATTTGGTCTACTCAAAGCCTGAAGAGTCTCCATCTGGTTTTTGT
TGAATCAGGAGTCGTCGTCTTTCAGGGACATCCCGGTTGTGATCATGTCATCGGAGAACA
TACCTTCCAGAATTAACAGGTGAGCACAGTTAAGGACTCAGAATCTTGTTTGATTTGGAA
ACCAGACTGATTACTGACGATCCTGATTTAGAAACTTTATTTCTAGCTGAACCACCGCTA
GAAAAGATTCTGATAGTCACATCTGTTATTAGGACATGTTTGATAGGCCTTGAACAAAAC
TAGACACCAAGATCTCTCAGAATCCTTTATTGAGTTGGCGTCACATACATGCCTTCTAAC
AAAGGAACAAACCCCACACCCCACCCAGCTCACCTCGTCTTAATAATATTCTATCTTGAA
ATATTTTGTGTCAAATAAATAGTAAAGATATGGATTGATACGGCTGTCGACCTTTTGAGT
CCATCATCTCTATGTAGAAAGGGTTATCGTTGAAGACAACTCACGACTGCCACTTGTCTA
TTTTTATCTGCGCAAATGGAGTAGAACCCCAAACATATGGACATAAATAAAGCTATCTTA
GAATATAGCAGGAACTTAGAATGAACTCTGACAATTATGGTCTTGTTTGTTCTGAATCAG
ATGCCTGGAGGAAGGAGCAAATGAGTTCTTCCTGAAACCAGTACGGCTATCAGACATGAG
CAAGCTCAAGCCCCATATAATGAAAAGCAGATGCAAGGAGCACTCCCACGAGGACCAAGA
CCTGCTAAGCAACAGCGATACCAACCCCACAAACAACAGCAGCAGCAGAGATACCATCAC
CATTAGCAGCAGTAACCCCACGGATCACAGCACAAGCGATACCATCAACAGCAGTAATCC
CATGGATCACAGCAGCAGCGATACCATCAGCAGCAGTAACCCCACGGATAACAGCAGCGG
TGATAGCAGCAACATCCGCAAGAGAAAGGCGGCAGATGGCGAAATTTTACCCAAGACAAG
CAGACCAAACCACAGTTAGCTGAAGAAAGATTATTTGACAGCCAATCTTTCCTTTCTTGG
TTCTTCATCTTACTCGGGTTTTTGACAACTGATTTGTATGTAAAACCTATGCTAGCTCTA
GTTTGCAAAAAAGAACGGAATCCGTGAACGGATACTGCTTGAATCCAATCCAATCGACCA
TGCTCGGTGTAATCAACATAGAGCTAACACGATTTTACAAACAGCTTGCTACAGCTTTCA
TCCATGGAAACACACGTAGCCCTCAGAAAATACATCTGTATGTCACATGTTTCCCGGTAA
GCTCACTGTCATATGTAACTTTAAGCACGGTTCCCTTGCCAAGGCCATAGTACCGAGCAA
CAGGATCAGTCTCTAGCATGCGAGGGAGCTGAAAGATAACAGCACCATTTTTAGTAAAAC
TGTGGTTAAAAATAACTATATAATAACTAGATGTTGATTTTAAAAAAATTGAAGATTCAT
GCAAAAAGAAGCTAATAACAAATGCAGTTTGGCATTTTAGGCATGTGAGTAATCCAACAG
GCAGATAAAAGGATAATGAGGTATGGCCAATGATGACTATAAGACATTAATATACTTATC
TTCAATTCTTTTATGGTAACAGCACAATCAGTTGGTGTGTGGAAATACTAAACATCTTGA
ACTGGATAATATATTAAAGTTCTAGTTTAAACAAAAACCAAATAAGCACACAAATAATAT
GGCAACCTGGCAAAAAATGTGGCAAATCATAAAATTATCGGCATGATATGAGACGCAAGT
GCTCAGGATGGTAAAATTTATCAATGGTCTCCATCATCACATACAAGTACTGTTATGACC
GGTACAACGTACCAACGGAGGAGGCCCAATGGGCAGGGTTACTTACGGGCTTAGCCCAAG
TTATCTTACCTATCTTAGAAGTCCAAGTTATACTAGAGTTCAAGTTATATTAGAGTCCAA
GTTAGAGTCCAAG