Map Locations of contig_242016 (5603 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_242016

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34013 5 2100 bp AK360899 Available Available None
MLOC_34012 1 314 bp None Available Available None





CDS Structure of MLOC_34013






CDS Structure of MLOC_34012






Contig Sequence (5603 bp)

>contig_242016 5603 assembly3_WGSMorex_rbca.fasta
TGCGGGAGTGCGGGGCCGCTGCGGTCAACGCGGCAGGGCACGCGGCGCAGCCAGCTGGCG
GGAGAGGGGCGGGATCTGGCTTTTTTTATTATTATTTCAATCAAATCGGCCAGCGTGTCG
TGGGCCGGCCCGATTAGGCAGCGTGCCGTGCTTGGGCCTGATAGCCTCGCACACGGGCCA
GCACGACACGACCCGTTTAGTAATCGGGCCCAGGCATGCCGTGCCGTGCCAAGCACGATT
CTGACGGGCCGAGTCATGCCGGGCCGGCCCGTTTGGCCAGGTATGGTTGTGGGGTCAGCT
TTCCTAATTACACCCTTAGCTTTATTCATATTTGTGCAAAACAAAAGATACTTTAGCGGC
ACTTGACCCCACAACATTTTGGTGCTGGCGCTACCACTAGGGAGATGAACAAGAATGAAA
ACACAATAGAAGAGGATGATGGTGGTGTTGCCTTTGGGTGAAGCCATGGCCACATGTGGC
AACCCCAAAAGGTATCAACTCTACACATAATTTTAGATGGCAATCACATGGTCGGAAAAT
GCAAAGCGTAAGTGCTACTGCTATGTCATCACCAGTTACCCAATAAAGTAGGATTTGGAT
CCTGGTTGGCCTATTTATAGTTTCATATGCATAAATTTAGCACAGAGACAATAAATGTGT
AACCCTCAAGTCCAGGGACCAAATTGGCATGACATTGCAAATATAGGTGGCATATGATAT
AATGCACTCCACTTCCACAGACACAAGTAGGCCTATAAAATAGCAGCAGCGTGAACATAC
GAGGGGTGTCAAAACCTCTAAACAGTATCAGGAAGGGCTGTCATACGTTCCATACAAGCT
CAGGTAGCAGCTTCGAGGTCCGGCGATATTAAGAAGAGAACTCCCCTATGAGGCAAAATA
TGTTTCGGCAATAGTATAACATGTCTTCATATAAGTTAACCGCTGCAGAGTAAAGCTACG
GGGGCGCTGAACTGAGCTTCAACCGCCCGATGTATAAAGAACTGGATATGATATAGCAAA
AGCACCGAGTTTCAAAGCGACCCAGGTTTTCCTCCATTCAATGTTTCAATCTAACTCCTT
TACTGCTCAAATCTGTCACCCACCACCAGTCTACAAGTCCACAGGATCACCCTCCTCGTT
GCCATTGTACTGCGGGCAAAAACAAAGAGCATAAAATGTCAGCATAATGCTCAACAGACC
GCAGACACGCAGTACTGGCAGAAAGTGTCTGCTAACCCTATCGATGCATTTGCAGTATAA
ACATAGCAAAACTGAAAATAGGGAAGTTAACAAAAAGGAAGGCAAAAATAGTAGGAACAC
GGGAATAACTGAAAATACGATCAGTATGCAAATTAGTTTTATTATCGCAGAGTGCTTTTG
AAAACCTTGAATGCCAAAGGATGCAAATGATGCACATACAGACCATAATAAAACTGCTAG
GACCAGCTGGTAACTAGAGGGGGGAATACTCTAAAATTCTTGCAGAGTTAAAACACAATG
ACAAAGTACCATGATGGTATCATATTACACTAATCAATCTTTGCAAATGCATGACTGAAT
ATGATTTTATACGACATGCCAAGGTTAAGCTGCTGTGCTGACAGATTAACTGTACGAAAC
GAGAGTACGCGGTTCCCTGCTATGGTACACCAGCCAATGAAAGTTGTTGCGTCAGCTATT
TATATGATCAAGCATGTTTATTGCTTGGAAAATGAAGATACACAAGTCTTTTGGACCCAT
TGGAGGTGCCATCATAAACAAATAAACAAAATGCCATACAGCCCACATTATTTTTACAAA
GACATCTATTTGTCCGCATTTATAATCTATCCGAACAGATTCAAAAGAACCAACTACATC
GTTAACTAGATCAGCAGACAACAGAACATGCTTCACTCTAGAACATTCTACCTGTAAGTG
GCAATGTATCAGTTTAACCCCTAGATGACATGCAGGTGGCTAAACCATAAGCCTAACCAA
ATGAACTACACCTAGAAGAGCTATCAATCAAACCTGAAGAGAAACAATACCTTACTTGTA
CTAAGGAATAACTAAAAGTAGCTTGTAACTTACAAAATTGCAGTGAATGAGAAATAAAGG
ATATAAACATAATAGGATAATAAGATAATGCGCCATCAACTGAGTTATCTCTGCCTAAGA
ACATTCATGTATGTTAAATAAATAATTGGCTGCAAATAGGATGTGCTGTTTGAAATATAC
TCACCCTGTCTGTAAAATCATTGCCAGAAGAAATGACATTTATTTCGTCATTATTGTCAT
CTTCCCCAAATTTCTTCAGAGATTCAGTTCCTTTGCTATTTTTAAGAGACTCTAGAGCAT
CTTCTGGTAAATATTTCCGTGGCACATGGATCATATCAATACCATTAACTCTCCTTTTCT
TCCCTGAAAAGGTAACAACAGTTTTTACATTAAAGACATACTTTCTTTCTTGTGTTGGCA
CATCTGCCCCAGGGAATGCATAATATTCAAGACAACAATGGCCCATGTGTCCGAACAACA
AACATATCATATTTTAAAGGACAGATGGGTTCAACATCAAAGAAAATTAACCAGGTGCCA
TTTTTAACTTGTTACCTTGAGAACACATGAAACTGTTAGCTTCTACGGTGTCATTATAAA
CTAGTAATAAGATGCGATCTTTATATATCAGTAACGAGTCCAACAGGCTGACGACATTAA
GATGGCTAGAAAAATGCTGGTATACCAAAATAAAGTAGTATCACCCAAGTTCTCGTCAAG
GTGTTACCAGTTTTTTCTTCTTCGCTTGTTGAAAGGGCAGCAGATCTTTTTCTAGCTGCT
GAACCATTCTTCTGTCGCTGATCATCTGGGCACATTTCATAAGCATTATATGGGTCGTCA
TTACCAGCATTCACGCTGGACTCTTGTTCTTTGGTACCAGATTTCAAGGAATCAGAAGCA
AGCGAATCAGCCAACCTCTCAAAACGTCCTTGAGACCTGAACATAACCAATGAGTCGATA
GCTATGAAAATCATGTCAAGAATAAAATCAAAAGTGCAATTATGTGGTGATTCAAACGAA
ATAAAAATTCAGAGTAGTTCATATAAAAGAAACATGCCTTTTTAAATCATCCTGTGCTTT
CACATAACGCCCATATGCTTTGATGAGTTTCTTTATTTTGGAGGTCATCCTACACCCAAA
AAGCAGTACTGTCAAGAACCAAATACTTGGAGAACTTCTCCTGAACTGAAGAGTCCCCCT
GCTAAAATTTGGATTACATAGAAGTATGCTCATATGTTGTAGAAAATTGAGAACCTTTCA
CAATCTTCTTTCTCTTTGTTCAACTGTGATTCAAGATCATCTACTCTGCCAGAAATTATG
CCTGCTTCGTCGATTTTCTTGTCCAATATCATCTGTGATAGTATGTATATATAGATATAA
ATGAACATAGAAAGGCTATTATAGTAATCTCAACCACAACTATATGGAAATAAAACGTCA
TAACCCAGAGAAGTTCAAGAAAGCATTTTGTCAGGCACATATGACGGGCCAACTGGTTAT
CTCTGTGTTCAATCAGAGCATGTTCCCATGTCAATATTTTCTCAAGCATGAATGATTACT
CATTAGTTTGTGGCATCATAATTTGGAGAGAGAAACATCGATGGTACCTTCCACATGAAT
GCATGATCATATTTGGTGGAGTGAACCTCTTTTAAACTTGACGGTCTAAATTTCTCCATC
ATAAAAATGGTCATGCATCAACTATCTAGTTAAGGCAGAAAATGCTGGAACCACACATGC
AACCAAAACATAACTTAATAACTGATAAGTTTGTGCCATTGCATCTGTATTTACAACTCA
TAATTGAGTGTCATCTATAACATGCTTATTGAGACATTGATAACTGACCTGTAGTTTAGA
TTTATCTTCATGCAATGCTTTCATATCCAGTGCGATTTGTTTCAGCTGCAGAGCATACAT
AAACATATAACAGAGGTCCAGGAATATGGAGACAGCTCCACCTACATGCTAATGAGATGG
ATTGTACAGTTCAAACCTGTGCTTCGCCGTCATCCTTCTCATCACTGCTGGAACGTCTGT
CGTCTTTTTTTCTATCTTCATTTTCAGAGGTGTTGAAACTTCCTGATGAATCACTTTTTT
CACCATCTACTTTCTTCTTAGGCCTTCTCTCACTGGAAAATCCACATAATCACTTGGAAA
GGTCGATGCATGTATATTTGCTCAAAGTACATCTAGAGTTAACTGAGTGGACAACAAAGA
CCATATCTGGAATGGAATACACCGAGATTCTTGTCACATACCTCTTCCTGATGGGAGATC
TTGATTGACTAGATCCTGCAAGTAAGATTAAATAGAAATAAAATTAGACGTCTGGATTCT
ATTTTTTTCAAAAATAATAATATGCTATGGGAAGAATGTGACACGTGTGCCCGTGCACAC
ACACGAAAGAGAGATTATCCATACCTCGAGAACGTGGCATCTGGTTACGAAATAAACGGC
CTCTGGTATCTCTGTCAGGGGAATACCTCCGCCGGGGTGAGTTTCTTCTCTCAGGCCTGC
CTCTAAATTCATGAATTCTATGATCTCGCCCCCCTACAGGTTAGGAACGTAGAAGCTTAT
ATACAATAATATAAAGGACTACACCACAACAAAGATATATACATGGACAGAGACAAGGCA
AAACAGAAGAACATTTAAGGTTGCCACTGTTAAGCTTCATGCACTAGCCAACACAACCAA
AAGTCCGAACTGATGGAAAGAGCTAATGCAATCAACATATACTGTAACAGCCACAACCTT
GAGCGATATGACTATTCAATTAGCACTAATATAAACAAGCACTACAACACTGCAAAAATA
GATAGAGTTATATAGAGACAAGGCAACGCACAATACATGTAAGCTTACCACAACCTTGAG
CCATATCATTAGACATTTAGCAATAAGTAGTAGAGAGTCCAGGATAACCCCAAAGGCCAT
TAAATGGAAGAGCCAATAAGAATAATGCAATAAAGGATACCAACATATGATTACACATTG
CGGTGCACCCCTTAAAATTAGATCCAGCACTTGCAACATCAGTCATCTGAAGTGAAATTG
ATGGATACTCCAGATTTGGATATCATGCTGCCATTACCATGAATAAAGATCTTCCACAAC
TCCAACACCGCCAAGTAAATCTAATTTCACTTGTCCAGATATTTCCATTGACTTTAATTA
TTCTTGTTCAGTGATAGCACTTGGAATGACAGGCAAGAATAAAGCCGAAGAAGAAAACTT
GAAACTGCTAGCATATTCAAAGAACAATTGGTTGCAAATCTGAACAATATGGTTTTCACA
AACTGAGAATGTCATGCATCTGATTGAGATGAGGAACCATGTGATATCCCTGAATAAAGT
TCTCCGGCAAGAAGGTAACCATGCAAGTGGCCACAAAATATCTAATCACTGGCTGAAAAG
GAAAGCAATGCAAATAGGACGAGTCATCCCCCCTGGAAGTGATCAATCCTAAGAAATCTG
CTCAGGTGACAGCTAATATGTACAGTGGTGAAATCAACAGAATAACCAGCAGGAATTCCA
CGATGTTCTGCAAGAAGCTTTGG