Contig Data
morexGenes
Links



Map Locations of contig_242008 (4753 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_242008

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34008 1 2878 bp AK357331 Available Available None





CDS Structure of MLOC_34008






Contig Sequence (4753 bp)

>contig_242008 4753 assembly3_WGSMorex_rbca.fasta
CCATCACCCACCCCCCGGAGCAGCAGCAGCCGGCGATGGCCCCGTTCGTCGCGGTGCGGG
AGGAGGAGGAGGAGGGCCAGGGGGACGGGCTGGATCTGAGGCTCTGCCTGCGCGGCAGGG
ACGGCGCCGGCTGCGTCGTCGTCATGGACCTCGACTCCTCCGTGCTCTGCGGGAGCAGCG
CCTTCTTCGCCGCCATGGCGCCCGAGCCCAACGCCGCCGGCGGGGCCAGGAGGATCGAGG
TCGACGGGGTCGACAACGTCGCCGCCTTCAGGGACGCCGTCGAGCTCATGTTCCAGGCCG
ACGCGCCGCCCTGGCTCGCCAGGGCCGGCGTCTCCAGGGCCATCGGCGTCCTCGAGGTGA
GAATGAGATGCGCATCCTTTCCTAGAACGCAGTATTTTTTGCTGTACAGCTCAGTTCTCA
TAGGCAGGCCGTGGTGGCCGTGATAGGCTGGCAGCACATTGCAGGTTTAGTATAGTGCAA
ATTGATTGCCCCTCTTGAATTGTTCTGAGCTTGCTTGATGGTCATGTTTTGTTTAACTAG
TCTATTAGTAACTAGATAGATGCACATGTTTTTGGATTTTAGCTTGTTGTAACGGTTTGA
AAAAGAACTTCGCTTCCTATGGCGAAATCACTGGAAGGAATTGCATTCATATCACGTCAT
ACGTGGTTTGTGCGAAGCCACAATTGTTATGATAGGAGTTATACTGACAATTTTGCTGGT
GCAAGTCATACAATTCTTTTGGGATTATAGTGCCCATAAAGCCGAGACCGGCATGTCTTA
TTGAGAAATACAAGTGCCACCTTAAGAACTTATAAATTGACCATTTGTACTAGTAGTCAG
GCTGCTAAGGCCATGGGCGCAAGTTAGCTGCGCAGGCGCTTGAGTTGTCGCGTGGTGTGC
GTACAACGCCAAACAATTTATCCAGATAAGCTAGGTCTGGACAGATGGGAGCGTGAAACC
AACCAAGAAATAATTGATTGTTAGCTAGTGCTTTCACTTCTTTGCCAGTGAATTAAATGA
AAGAATTGATTCTTCTACATGGAACATTGTCCTACCTAATTAGCCGTTATCATGGTCCTA
TTTCTTTTGGGATTATACTGCCCATAAAGCTGAGACCAGTAACATGTCCTATTGAGAAAT
ACAAGTGCCACCTTTCATAAATTGATCATTTGTACTACTTAGGCTTCTAAGGCTATGGGC
GCAAGTTAGCTGGGCATGCGCTTGAGTTGTCGCGCGGTGAGGGTACAACACCAAACAATG
TATCCAGATAAGCTAGGTCTGGATAGGTGGGAGTGTGAAACCAACCAAGAAGTAATTTAT
AGTTAGCTAGTGCTTTCACTTCTTAGCTATTTAATTAAATGAAAGAATTGATTCTTCTAT
ATGGAACATTTTTGTCTGCCTAATCAGCTGATATCATGGTCCTATCTATTGAGTGTAATT
ATGGGAGGACAAATCAGTAATGTGTGTGCGGATAGGGTGTCCTTGGATCTGAAGTCAGCG
CATTGATAGTATAGTAGTATGACAGCACGACAACATAAAAGCTCTGATCAAGATGGAAAC
ATTAGCAGAGTACTAATTTTAGTGGTACTGAAATTGGTAAGGAATGTTTGCAACATAGAA
TGTTGTGACAAATTATTTTAACTTTGGACGAATTGCATTTGTTCCGTGACACATTGTTTG
GTCCTTAAGCTGATGCTAGTTACTCTGTACGTTATTTATATTGAACCTCTTGTAACACAG
TGCCTGGTGGTCTCCATTTACAGAGTGGTACCAATTACAGAGTAGGTTTGCAGTTGTATT
GCAACATCAAATAATAATACAGCATTGTTTACAGATGCTACCAATATTACCTTGCTATAC
CTCTTAGTTCTTTTACGGGTTTTCTTTCTGGTATGATTTCTTGCAAAAGAAAGATACGCT
ACCTACTCTGATAGATGTTGTTTTAATTTTGAATAATAGGTGGCTTCCTCGATTATGTTT
GACAAAGGAATCAGATCATGTTTGGAGTACATTGAAGCAGTTCCATGGACTGAGAATGAG
GAAGAGAAATTAAAGCACCTCTTTGCTAGATGCACTTTCGACGAAGCGTTATCAAAAGAT
GTATTGGCAAGATTGCAAACACAACCGTCTAGCAGCTCGGAAGACCTGACAGATCAGCTC
ATCCAATCCGTCACCAGCAGCACAAACAACAGTGCAAGAAAAGACATGCAGTCTTTGATC
AATGGTCTTCTAAGCAAAAGCTCAGTATATCAAAAGGATTTGTCCGGATTAAACAAAAGG
AGCCTTTACCAGATTTGTTGCTCCTGTCTGAACCTACTGGTGGAACTTTTTAAGGAAGAC
CCGGAGCCAAAATGGCACACAGACCAGGCACTGAAAATTAGGCACAGTAAACCCATGATT
GAAAGAGTCAGCAAGCAAAGTGAGAACCTCAGCTGGCTATTTGAGATCCTGGTAAACAAT
GACATGGCGGAGAATTTCGTAGTGCTGTGGGCTGGGCAAGACGAGCTCATCAGGATGCAC
GAGCAGGCATCACCGATGTTCAGGTACGAGCTGAGCCGGATATCAGCGGGTGTGTTCATC
GCGCTCGGGCAAGGGAAAGTGCAGTGCCCCAGCGATCTGAGGAGTCAACTGTTTCGGGGA
TGGTTCACGCCCATGTTGACCGATTTCGGCTGGCTTCAAAGGTGCTCCAAGGGGCTGGAT
GCGAGAGCGCTGGAGGATAGCCTGGGGCAAGCCCTTCTCACCCTTCCGCTCCGGGAGCAG
CAGAGCCTGTTCGAGGAATGGTTCCAGTGCTTCGCGTCTAGCGGCGCGGAATGCCCGAAC
CTTAGCCGAGCCTTCCAGGTATGGTGGCGAAGGTCATTCGCTAGATAGATCGTCGGTAGA
GCCCCTGCAGCGGCATCCTATGAGATTATACCTGGTTCGCGTGAGTTATATTGGTATTTG
TAGTGTGTGTATGATTGTAAGATAAGAAGAATTCTTGTTAGCCTGTAGAGTTGAGTTTTT
CTTTATGATCTTGCCTCAGTTCTTCCCACTGTATGCACTTCTTGACAGTCCGAGTCAGCA
ATAGAATTGTTGTAGCATTGCTTCAAACCACAGTTCTCTTGCTACAAATTAACAAGTGAA
CATAGCTTCATATAGTACATACATATCCCAATGGCAATTTGGTTCATATTTGCCTCACTT
TACATGGCCTTATTCCTGAGCAAATACAGATACAGTACTAATTAAGCAAAATGCAGGCAT
GGCAAACATTTATACTATACAGCAGGCATGCTCTCCTTGGTATCATCAGGACACAGCTTC
TAGCAACCGATCTTGTTGTTACCATGAGCATAGCGAAGGCCAACACTTGCAGGCTGGGCA
TCATCCTCAATGCTGAGCCAGTGGCAGTCCTGGAACCCGCAGCTCCCTGAGGCGCGCAGG
GTCTCGCCAACGTCCCGGGGCTCGAGGAAGTGCGGCGTCCACGACGGCGTGCCGTCCTCG
AACGAGTTGTGCGTGAGCCGCTGGAGCCCCGAGCCGTCGATGTTGATGGTGAATATCTCC
CCGTAGGGCTGGTAGTGGTGCGGGTTCGAAATGGGCTCGGCGGAAACGGCGGCGAGGTCC
GAGGTGAACACCATGCGCTTGGAGTCCGGGCTGAACCAAGGGTGGTTTGTCCTGCCGCCG
TCCGCGCTGTGCACCACCCTACGCAGCCCGGTGCTGTTCGGGTGCACCATGTAGATGGCG
AAGCTGCCGCCTCCCGGGTTGTGCCGGTCGGAGGCGAAGGCGATCCACTCGCCGTCGGGC
GACCAGTTGCACATGGTGTCGGTCCATGGGCCGTCCGTCAGGCGCCGGATGCCGCCGGCC
TCGCCTTCCTCCGCGTCCATGATGTAGAGGTTCTTGTGCCCGGACCTCCCCGACCGGAAC
ACCAGCCATTTCCCGTCCGGCGATGGCGACGGGAACGCGTTGTTCTCGCCTCCGACGGTG
AGCTTCTTGATGGAGACCTGAGAGATGCTGCCGTCGTCGTCGTTGTCGTCGCCGAGGGAC
ACGGCCACCACGTCCACCTCGGTGCTCTCGCTCGCGAAGTCTGGTCCGATGCTGGTGTAG
ATGACCCCCTTCCTCTTCCAGTCCCACGACGTGGGGAATGCGTTCCCCGAGAAGATCTTC
CGGCGGCCGCCGGAGCCGTCGGAGTTCACCACGTACAGCCCCGGCAGCCCGACGAAGGCG
ATCCTCCTGCCGTCGGGTGAGAAGGAAGGGTACGACCCGTCGATCCTGAACAGCGACTCC
GACGCCGGGCTCTTGAGGCTCTCCAGCAGCAGCGGCGAGTCCCCGTTCCCGGTGCCCCGG
CACCTGTGGTACCCGACCCGCGCGCCGTCCGGCGAGACGAAGGGGTTGAAGTGGTGCGCG
CGCGGCGCCACGGGCCTGGTCACCTCGAAGTAGGCGGCGTTCTCGATGCCGCCGCCGGCG
CTCAGGTCGATCACCTCGATGTGCCGGTACTCGGAGCCGGGCCGCCTGGTCGCCACGGCG
ACGAGCCCCGGAGCGCCGGGCGAGGCGGCGGGCGTGAAGGCGTGGAACCCCGGCGGGGTG
ATCCGCTCCACGGAGGCCGCCGACAGGAGCCCGTCGTCGGAGACCTCGATCTTGGCGCGG
TACACGCCGTACCAGCCGTCGCTGTCCCGGCGGTGGAAGAAGAGCGTGGCGTCGTCGGCC
CAGCAGGGCCAGCCGCCGTTTTTGACGAGCAGCGTGCGCCGGGAGCCGTCGGTGGTCCGG
AAGACGTAGAGCG