Contig Data
morexGenes
Links



Map Locations of contig_241849 (6261 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_241849

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33978 4 2836 bp AK364215 Available Available None





CDS Structure of MLOC_33978






Contig Sequence (6261 bp)

>contig_241849 6261 assembly3_WGSMorex_rbca.fasta
GCAGGGAACGAGCCTGAAGGGACGCGGGGTAGGTCCGGCCCGGGATAAGTCCCAATAAGC
TCCTCCGTGAGAGTCTTATTTGATAAGTCCTAAATCACCACAATAAGTCCCAATAAGTCC
CTTATGTTTGGTTTAGATGGGACTTATAGAGAGCTTTTTTAAGTTCCTAAACCAATAAGT
CCCTGAAAACAAACCCCCTCTAAACGCGGAAAGCGAAACCCTAGTACAGTATCACCGAGG
GAAGACCCGCGCGGCGCACGCGTATGGACAGCGAGCCTCTCTCCGCTCCTCCCCCGAAGA
AAAAGAAAAGAAGCGGTCAATACACGGCGAGTTGGCGCGCCGTCGCCGTTGTCAGGTGCC
CTCCGCCCGCCGCTTTCCCGCCTTACTTTCAGTCTTTCACGACCAGCCCACCACCCCACC
TCATGGCCAGCCAGCCAGCCACGGAGCCAACCCCAGTCCCAGACCTCACCGGCCGAGACG
CGACCGCCACCACCACCGCCGGTCGCCGTCGCGGGTCCCCGTTGGCCCGCGCGGCGTCGT
CCGAGGTCGGCACACGGCCGCATCACGCCTCACACCAGGCACGCGGGGCAAGCAACCTGC
TACCGACCACGATCACGATCGGTCCATCACACAATTCACATGACACGCAACGCCAATCCA
TTCATACATACAGTGGCCAACAACAACAACAAAGTACTGTAGGTGCGTCTGTTCCACAGG
GTGATGGAATGGATGATGATGATGATAAAACTGAAAGGGTTCTTGAATCTTGACACAAGA
CAAAAGCGACCGAGCGCCGGCACACAATGGTTTTTCGGAGACGCAGTTTGCAAACGAACG
GTAGCCCGAGGTGGCTCATCACTTCTAATGCTGGCTACAAGCTGCTACACGAAGGACCAG
TTGACGAACATGAAGGCGAGGCAGTGCGGCGCGTCGTCGTCGCCCAGCACCTTCCACGCC
ACCGCCTGCTCGTACGACACCGGCCGCCCCATGCTCGACACGCACACGCCGCCTGGGAGG
TACGCGAAACCCTGCACAGGCACACAGAACAACAACAAAGTTTGAGTTTCAGTTCAGTGT
TGTTCATCATTCGGAACGGTGGGATGGCTCTGGCTAGGCCAGCTACGTAACGTACCTGCT
GCATGATTTTGGGGAACTCGGAGCACAGCGCCTTGCGGCCATCGTCGTCGAGGATCTTCT
CCAGCGAGATGTCCTGGAGCGCAATCAGCGTCGTCTCCAGCATGTCCAGGCCGGCCTGGT
TGGCGAAGGTGAACACAGGAGCTGCCTGAAATTATTGCAACCCAAACATTTTTGTTGTTA
GGCCCGCACAACACAATGCCGGTGTGAATATATGTGGCGTGACCAACATGATCGAGCACG
CAACCGACCTTCAGGGAACAGCACATGATTGAATCCGAGTGCTGCCACAGCGCTTTCAGG
GAAGCGTCCGCGCTCTGTGACTCCGTGCAAAGGAGTTCCGCCCCGGTGTGAAACCTGGGA
TTTTTTCACGCAGCCAAATTACTTCTCTATTGTGATAACATAGAATAATAGCACAGGCAG
TGCTGCAAAGATGAAATGGATAAATGGCAACCATCTTCAGAATGAGGGGAAAAAAAGAGA
CAGCCTTATACCTGTAGCTCCTGCCGATCCACCTCGCAAGCGTGTGAGCCTCAGGGGATC
CTGGAGGGTTCTTCATTTCGATCTGTCCACCAGGACGAGAAGGTGCAATTGCCATGGCCA
CCCTCTGCACTGATGCCACCACAGTCCTCACATACTGCCTCGCCATTGCCGCGACACTCT
CTCGTAGGTGGTTCTCATATGAGAACTGGAAAGCAATGGTAAGCACTGATCTTGTGTTGC
TGGTGCTGGATGCGTCACTGGGAGCACGAGTCCCACCAGGTCCAACCTCAAGAGTGGATG
CAAGGTCAAGTGTACGTGTTGCAGACGGTGCATCCTGCAGTGTCAAGTGAATAACACTGA
GTTAGTTCAGTGTCAAACAATGGGCAAGATCAATGCTACCAGTGCAAACCATACTAACCG
TCTTGGCATCAAGTGGTATCACACGGAAGCCCGAGGGTAGCAGTGGAGCATCATCAGCAA
ACGATTCATCAATCGGCGCAAAGACAAGCTGTGCACAAGCACCAGCAGCATTCTCATCGA
CACCGCTGCATAACTGCCATAGAAGATACAGACTTGTAAGGCCGGTGCAACAAATAAAAT
GAAAATGATGCAAACTAGCAAGTGCCGGCTGAAAGCATACCTGCAGAAGATACATATCTC
TTGATAGAACAACTTCATCATGACAGAGACTGTGTCCCTCGAGTCTAATAACCTCCAAGA
ACTGCAATTTAAAAGGTTAGTTTGATGGACAAAGATCGGTTAATAATTAGTACAACCTCC
GTAAAGAAATAAGTAGTGATCTAAACGATCTTATATTTCTTTACGGAGGGAGTGCAAAAC
TTTATAAGACCTTGAGCTAACTTGAAATACCTCTTCATGCTCTAAGGTATGTGCAAGTGG
CAGGATAACCTGACTGCCCATAAACCCACTCGCTCGTAGACCAGGAACTGCATAAGGACT
AGCTCGCAAAGCAGCGGCGGAATAAGCATCAACACCAGGATCAGCCCATTCAGAGCGATG
CTCCCTCAGAAACCGTACTAGTAGAGCAGGCGGTACATTCTACATGATGAAAACCAAATT
CACCAGGCTCAGTTATGGACAGGTCACACAAACAATCAACAGATCCCCTACTAAATAGAA
CATAGATGGTTTATGAGTAAAAACCTGCAGCAACATTGAAGCCTTGGCACATAAGACGCC
ACCCCCAATTGCAGAAAACATCTGGGAGGGGTTGACATGAGTTCCAGCAAGTTTGTTTGG
AGATGAGTTGATAGCAATTGTAACATCCTCAGCACCATCACTGCTCATCAGTGACCAGCC
ATCATCCAGAAATCCATTAACAGCATCATTGAAACCTCTGCAAAACATGTCGAGGACCTT
AGTCATGGGGCATGTATGGGATGTCTTTTGGTAAACTCAGACAGCACGAATGGCATGTAC
GGAATATAGGAGCATTGCCACAAACCTGCTCAATCTCTGACTAAATGTTCTTAAAACTGC
TGGCTGGCGCCCCCCTCCATAGGGCATTTCTCCACTTGATTCATGTGCAATCTGCCTAAT
GTGACGCAGAGCCTGTAAAAAAAGGACAAGCGATTGTCACTTAATCGTTCATATCTTAGT
GCCACAAGAACAGGCAAATGCTTAGCACAAACAAAATCTTAAGGAAAATGCAATGGTAGA
GCATACAGCAATTGTCATCTTCTGCGCAAGAATCTTTGGAGACTCATAAAGTGGTCTAAG
GACCTCAGGCACACTCCAAGCCTACACACAGATATGATTGTAAGATGCATGTACAAATTA
TGGAAGTTACAAATCTGATCAAACAAAAAAAATATATGGAACTTTTGCTTACATCTAAAT
CAACATGATCTACAATGTGGATCATAGAGCCACCCCCCTCGCAAGGGCGGATTAAATAGC
CACTAGGTAGCACCTCGGCTCGGACAAAATTTGGAGTGTTAGGTCCTGATGGACCCCCAG
TGGCTTGAGTCAACGATCTCTCACAGATCTACAGAAGAAGGCAGTGAGTAATAGTTACCA
GATCTCAGCACAAACAATATTCGGAACAGTAGACTTAGTAGCATTAATACGCAAAAGTTA
CAGTGTAAAGTGTAATCAAAAGTTGCTTGATCCAAACAGACCAAGCTCAACAGAGAAGTT
GACAAACAGAGCAACAAACAAACATAAATGTCATAATCGTAACAAGCGATGAGACATATC
AATACCACAAGACTGCCGTCTTCAAGACCGCTAGTGTAGCGGAGAATCCAAAAGTCACGC
GGTGCCGCCAAAGTTGTCGGTGCATAAGTCTACATAATTGAAAGAACAATATGTTACAGT
CAACACAGAAGAACCACATCCAAATAAACCCAGACAAGGGAACCCAAGCTAACTATAACT
AGTAAGAGGATGCAATACCTGCATGTAGATGAGCTCAATAGTTCCACCATTACCCGTAGG
GATAATCTGGAGCACATCCACACACCGACAGTCACGATACCAAGAGGGGCGATCCTTGAG
GATCTCGGCAACCTGTGTAGTAGTCTATTAGTTGGTGTCTGCTGAATGGAAACAAAAAGC
TCTGTGATGATGAACAACACCATACCTTTGTGGGCTCAAGGCTCACAAGGCCACAAGCTC
GGGCTGCTACGCCACTACAATTGTGCGATACAGCAATGATTCCAATGGAATCCGGACCAG
GCTGTAAAGAAACACCGATTTTAAATTCATCGCGTATAAAGAAACTGAAATAATCAACGC
ATGCCAGAGTTCCACCAGTTGGAATTATGACATTACCTTCATCCCAACCATTTGCACCCA
ATCGACAGCAGTTCCCGTCGCCTTGGACAGGAACTCTGCCAATGTCTCCTCAGCGATAGC
GAGTAGACTGCAACAAACATAAGGAATTCCATCAACCTTATGCAAAAGAACATGTGAAGC
GCCATAGAAAAGTGAAACTGTAATTACCCTGCTGGGTTGTTCGCGTCCCTTTGCGGACGC
GGAACTACTGCGTTCTGCTGCTGCTGGTGCTGACCACTAGTAACAACAGACTCACAGCTT
GTGTCTGTAGTCGCCACAGAAGGCTGCAAACACCATTCAGCAAAAGTTTAGGCGCAGGAG
CCAATAATTTGATCAGCAGATAATACATGAATCCAACACAAATTTGCATCTATTTAGAAG
ATGTCAGTAGCATTCACAGCTCACTAGCCATCAGGTTTGAAATCAGTGGCACATAACAGT
ATCCAAGAACCCAAAATTGTTCAGAAATCATTATCTCTTGTAGTAGAAAAAAAGACCATG
CAAACGTTCTCATAGTAGGTGATGGGAGGAACCTCACATTACTGAGGTGCGTCCGCATGT
AGCCGTTCTCGTAGACGAGACGGGACACCTGCTTCTGCAGCCTGTCGTTCTCCTCCATCA
GCAGCTTGTTCATCGCAGACAGCTTCCGGTTCACAGTCTGCAGGCGAGAGGCCTCCTTCC
GTTGCTTCTCGCGGCATCTGCAGTCATAAAAGGAATATCAATCAATCTCGGCGGCCACAC
CAAAACGGGGGGCTACAAAAATGTCACTTGCTCATGAAGAAAACCAAGACAGCGATCTTC
GTACGCGCACGCACGAGATTCCCGCGTCGTTGCTAATAACATTTTGGCATGTCACATCTC
AGGTGAGCACAAGTGTGTTAGGTGTGAAGGCATTGCAGCTACACAATGCTCTGGCACGAA
AGCAACTACTGATATGATCTGAAATCTGAACAAGAACACAAGGCTCTGAAGATAACTAAT
GCTCTAGAAGAATCACGCTTGTTCGGCCAAGATTCAGCAAAAGAACATCTCTCTTTTTTA
CGTAGAACACAACGGGTTGCAAGAACAAGAAACAGGCACGCACAAAAAAAGGACGCGGCC
GCTTCTCCCCCACCACGCCACAAATGGTAAAAACATGGTGAAAGGCATTTGGGGCAGGAC
ATAAGGAACTCGATTTCTGGTATTGACAAGGAAACATCACGAAATCTTGGCAACTTTCAG
ACCAGTGAGGCCAAAAACAGGCTCTAATTTGGGCGTGGCATATGCTACTAGGTGCGTAGT
AGGTGCCTGCTTTCACACCCGAATATATCCTAGAACCACTAAGCAGAAACGGGCCAGACG
GAAAGCCGCCGCCTGGAAAGGAGATGTGGATTCTTCCTGGAGCCACTAAGCTGAGTGGAA
GGATCAGCATCAGAATCAACCAAAGCCAGATTTTTATCCACGGGGGCAAACCACAAACCC
AAGAAAAGAAGGCCAATTTTGAGCACCAAGAAGGAAAGAACGCGAGCAGTGAGTCAGATC
GAGAGGCGCGGGCGGGGACGGACCTGCGGTTCTGGAACCAGACCTTGATCTGCTTGGGCT
CGATGTTGCTGAGTATGGGGCACTCGCGTATGAGCTGCTGCCGGCGGAGCGAGCTGGGCT
TGGGGCACTCGCTGTAGACGCGCTCCAGCGCATCCACCTGCTCGGGGGTGTAGCGCACGT
ACTTGCCCGTGTCCACCTGCGGCGCCCCGCCGCTGCCGCCGCCGGGCGACGACCTGTCCC
GGTCCCGGTCCCTGCCCCCGCCGTGCCCGCCGCGCCCCCCCCGCACCACCATCCGCCCCC
CCCCCCCGCGCCCCCGGGCCC