Contig Data
morexGenes
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Map Locations of contig_240188 (4165 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_240188

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33774 1 544 bp AK354786 Available Available None
MLOC_33775 1 1270 bp MLOC_33775.1 Available Available None





CDS Structure of MLOC_33774






CDS Structure of MLOC_33775






Contig Sequence (4165 bp)

>contig_240188 4165 assembly3_WGSMorex_rbca.fasta
CCACCATCACTCCGCAAGGCGCTGAGGTCCACCACACTGCTAGTTCCATGGATGATCTGG
AAACATAGGAATGCGTGTGTATTTGATCATGCCACTCTGTCGCTCTCCGAGCTCGCGGAT
GGAATCAAAGATGAGATGAGATGTTGGGCTAGAGCNNNGGACAAGGGGCTTAGGGTAGTC
TTGCCCCCATCCTGGGATGTGCATTGAGTTACTTGTAATCTGTTGTAACCGTCTCCTCTG
AGACTGACTTTCCCTCTTTTCAATATAAAGAAACGCACATCTCTGCGTTTTCTCGAAAAA
AAAATCTTAATGTTTCCACAGCTTCACAATTCTCACAATTCTGGGTATGTTTCATGCCTA
TGACATCTGCCTAGCACATTTTTATATTCACCCTTGACAATTGACATACACAGTGAACAA
CAAATATTGTGAGGAAAGGGTCAGAGAATATAGCCATAGCCCATAGGCATGAGACTTGTA
AATGGAGTGTCTGCAGATTTTGTAGTCAAGACAGCACAGAAAAATGCAAACTGTTGCTGA
AAAACTGGCAATGAAGTGCATTGGTAGTGGTGATCTTGGTATTATACCATTATCTTAAAA
TAAACTCAACAAAATGAGTGCCCTGCCTCCACCTGATTTGAGTATAAACAAAGTTGCACA
GATGACAGAACACGGGAGTGCCTATAAAAGTATTCTCTGGCAAATATACGTAATACCATA
AGAACTAATAAGCGCAAGTTTAGTACCTTGTTTCCATATCAGAACCTCGGCCAAATACAA
TGGGAAGGGGTCCAGCCCAAGTAGGTGCAACAGCAGCAACCGCAGATGGTCTGATAAGGC
CTTTCCCAGCTGCACGGATAGCTATGGTTGCTGCATGACCACCTCCAACAACTACCAGTT
CACCATCTGAACATAGTGTAGACAGTGCAAGTGTACACCCACATCGTTAAGTCACTACTG
AGATTCAAAGAGAACAAAATTTTCAAAGTGATTGCCGGTACTGAATAATTGAAAATCGTA
CTGAGAACAGCAGTCAATCTGACAGACAACGATCAACTAGAATTTGTTTTCTGCTTCCTG
GCATATGTTCGTACTTGTTAACATTGACAAGAGAATATTCCCATGGTGGCTTTGGCTGTT
CTGCTCTACTCTATAAGCTTCCTTTAACTACATTGCTACTCTACCCATGAAGTACTAACA
TACGATAATTATGTTCAGAACCATAACCGTAAGATGCAGCATAAAATGGCCAGCCAGCTT
TCATGTACTAGCCAAGAAGAATATAACCTGGAAACACTTTCTCTAGAATATTTCAGTTAG
CTATGAATGATAACGTTGGGCAGGCATAATTTTGTGCATACCACAAACATACTACTTCTG
GGCTCTAGTTGAACCACTAAACAGTCTAAACCATACATGTACTTTTCATAACAATGTTCC
AACTTCCAATAAGCATATGCAGGTAAAGTAGGAAGGTACCATTAAAGGATAGAAGAATGA
GTCATATTCATGAACCAAATAACCGTAACCAGAGCAAAGTGCATAGAATCAAGTACTAAT
TCCAGGAAAGATGCTTGCAATGACAGACTACCAGTAGACTGAAAGAGTAAATTCTGTTTT
ACCTGCATCCGCCACAGGACTATTTGGTGAGTTCAATAGCTGAACCAGAAAATTCTCCAT
CACATCAGCATTATAGTTCAGTGATGGCCTGTCTGAATAACCCAGACCAGGCCAATCAAC
AATAGTAGCACGGTAGCTGAGTTCTCCTTTACGTGTCACAATATCTTTGGCAACCACCCT
CCATTCCTCCACTGTGCTAACATCAGAAATCGTAGGGATCATAAGGATGTTCTTCACATT
CTCAGCAGTCCCCTGATCATGTTCCTCATAGTAAATGCTTACTGGTTTATCCTCAAATGT
CCACTGCCAATTCCCACTCTAGAAAAGTATACCAAATAATGTTACAGACAGATAATAGCA
CATGGAGACAAAATAAAGTTGCTCCTGTGACCACAGTTAGCAGTCCAATGTTGAGATATT
TGCCTCTAGAGTAGTCGATATTCACTAAGGAACTTAACTTTAACAAATGGATGCACAAAC
CATTGTACTAGCGGAATCTGTTGAAGTAAACATGGTATCACGAACTTCAGGAATATTTTG
TACATATTATAGTACTAAGTTCAGCACAATGTGGTCCACTCTTTGTCGGCCATTGCCTAA
GAGGAAACCTTCTGATACTTGGGATCAATGCTACAATGTAACAGTGGTATCGATGAGGAT
GTTAACCCAGTATCAAAGCAGTGTGGATGAACTGGCGGCAAGCATCTGACATTCTCTGTG
ACAACAAGGTACCACAGAAGGTCAAAGGTAAGTTCTGTAGGACGGCGATCAGACCTGCCA
TGCTATATGGAGGGGAGTGTTGGCCTACTAAGGGACAATACATCCAACAGAGTGCCACTG
AGATGCACATGCTAAGGTGGATGTGTGGCCATACAATAAAGGGCTGGATTAAGAATGGGG
GAATACGTGATAAGGCAGGGGTGACACCAATTGAAGAGAAGCTTGTCCAACACCAACTAC
GGTGGTTTGGACATATCCAACAGAGGCCTGCAGAAGCACCAGTGAATAGCGGTGTTCTAA
TTTCTAAAGAGTAGTGAAAATACTAGGAGGGGTAGGGGGCAACCAAAGTTGGCATGGGAG
GAGGCGGTAAAAAGAGACTTTCGGGACTTGAATGTACCCAGAGATTCAGCCCTTTATATC
ACTGCATGGAATTCAGCAATCCATGTACCAGAACCTTAATTTACATTCCCTTACTTTGTT
TACATGTACTTAATCCCTTCTTATATGGGTTCACATAGGTTTCTTGGGTTCCATCCCTAG
CTTACCTCAACTTGCTTGGGACAAAGGGCTTTCTTGTCGTAGTACCAAGTTCAGCACAAT
GTGGTTCACTGTTCAAGTCTTCAAGGTCATCATGAAAAAACTTAGCATTCTGTTTTGTTT
GGCTCACAATTCCTACTTCCAATTTGTTTCCTCTAAAGTCAATTCCTTATGTCCTGACCT
CTCATCATTGTTACTATAGGAGCAACATGACATCAACTTCTCTCTATCTTAGAGAACATG
CAAGTACATGCATAAACTCAGACATGCATGCCAATTAATGAAATCGACATAGCAAAATCA
CCGCACTAGCAATCAAGTAGGTAGAACCGAAGATAAGGCCCTGGTATGACACCGACTGTG
AATAAGAACTAGAAAGAAAGTAGATGTGCCAGACCATTAGGGAACACTGCAACTAAACCA
ATTAAACGGACCAACTACTACTGGATAAGCAGATGAAAGGAAGATAAAAAAGGAGGAAGC
ATCGGTGCATCCTACTCTTAAAGAGGTACCTAAGGTTTTCAAAAGAAAATTGGCAATGTA
GAGAGCGCACATTTTATTTACATTTAAAATTTCAAGGCCCAGCTAGACTGATTTGGAAGA
TATGAAATTGACAAGTAGCCAAAACATATGCTGATGGTCAGTGAAAAATCACCACTCATG
CACATTTTTTTCTTTTCCATCTCTTCAAACTGAGGTCGAATTGGTCTTGAAATTTTGTAT
AACTTTTAGACATGGAAGCAAGGAGGTAGCACAAAACCTCATATGGATGTGACAGGGGAG
AGAGAGAGAGAGCAGGCTTACGGTATCCTGGATAATGTGAGCCAAAAACGTTAAACAATA
CTGACCATGAAACACAACACCTCATATGTATGTGGACAACACCGCACTACTGACCATGAA
ACATAACATCTCATATGCATGTGGACAACACCGCACTGCTGAAGATACTTCTTCCATTCA
TACTGTAAGTAGTATAGGCTCTGTTTCATTGTGTAGTGATTCCACCTTGTCAAGAAAAAA
TTACAGCAGTGTTTTGATAATTTGACCCAACAGTCATCAATCATTAGCGTCATCATAGAT
TTGAGATTTTCTCTACTTCCATTTCATACTGTAAGTAGTATAGACTCCATTTGTTTCGTG
TTACAGTTGTTAGGAAAACAACTTATCTGTATTGAAGGTCCAAGGAACATATATATATTA
CACATGACTTGAGATGCAAGGAAAGTAAATGTAGACTAATAAGGACTCCTAGACTAATAC
TAATAGACTAATAAGGACTCCTAGA