Contig Data
morexGenes
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Map Locations of contig_239156 (4567 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_239156

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33638 5 1781 bp AK361977 Available Available None
MLOC_33639 1 666 bp MLOC_33639.1 Available Available None





CDS Structure of MLOC_33638






CDS Structure of MLOC_33639






Contig Sequence (4567 bp)

>contig_239156 4567 assembly3_WGSMorex_rbca.fasta
ACCACGTGCTTCCGCCGGCTTCTTCATGGCCGGGTCGTGCTTCCACGACAGGTCGACCTT
GCACCATGCCAGCCGCTCGAGCCGCCGCGTTGATCCGATCCGGATACTGCGCGAGTGGTT
TGCGGGTCGAATAGGCAAAACTGCAGGGGTGTTTGTGTAAGAACAAAATGACGGAAGACG
GTTCGTTGTGACTTAAAATTGAACTGCGGGTTTATGAACAGAAAACGGAAGGACCTTTTT
GCAAAAATGCCACGACGGANNNNNNNAAACCCTATTTGCTTTATTATTATGGAGAGATAT
GCTCTCTTTTCAGCATTGATATGCCTACAAATTTCCGGACATGTGTATATACAAAATCAT
CCGTAACAGTATGGACCACAGATAAACCTCACGCCATACGCACGCACTGTATCTCAAGAG
GAGACCCAAGCAGACCAAAAGATTCAGGTACGTTTTCATCGAAATTCGCTGGCTGTTTTC
AGACAACGACATGTTTTTTTTTTCGTACTCGCGTGCGCTCAGTTCGCGGGGCAAGCAACG
GAGCCACCGGGCATATTTTCGTTCACGAAACCAAAAGGAGAAAGGAAGAAGAGAGAGCAA
GTGGGCACTTGGTCGGAACAGCCGACGTGACAGTCGACACGCTGTCCACGGCCACACGCC
GGCCCGCACGGCGACGCGGGACACCGGATCGGGGCGAGCCACGCCCCCTCCCTCCATGTG
AGGCTCTGAAACTGGGAGGCGCCTTTTCCTCCCTTTCTTTTTCGTACTCGCCGGCGGGCC
CCACTCCCCAATCTACTCCCGCCGTATCGTAAACAAGCAATTTTTACGTGAACGCTCACC
CGTACGTACTCCACACCGCGCCTGTCACAGCGTGACGACGCAAGCAAAATCATAGACTAA
TCGAAAGATCGAGTTCAAAAGACGATTTGAACTGCGCTAGCGGACAAGCGATCGTGGCCC
GTCCGTCTCGCTGTCAGACGCGGCCATGCACAGCGCGGATTCAATACGGCATGTGCCGCC
GTGGCCACAGGGCGGCAAAGGTGCTGTGGACGGGCCGCCGTGCATTTGACGAATGGCCAT
GCACCTGCCTGTGCAGTGTGCACGTACCTACGACCCGAGTACGTACGTACGTATGGTTGC
GCGGTATCGGCTGCGCCCCGTTCCGTCCAAGACAGGCGACATGACATGACATACATGGTC
ACGCGACGTCGTATTTCCCCAGCTGTGGCGCAGCCAGCGTACCAATTCCGGTAGTAGCAG
CAGTCGTCGAAAGATTGTTCCTGCTTACTCGTAAAGACATTTCCGCCAGGTCCAATCATC
ACTACTTCCATACGGTATGAGCAGGAAGTGAATGGGTGAAAGAGACGCAGACGGCGACGC
GGCCCTCCAAAACCTTATATATATAAAAAAAAACACGGCTGCTGGCCTCCACCATGATGC
CATCAGTTTGTAGGAAACGGAATGAAGCCCAGCGCCGGGTGTGAAGGAACGATGGAGCGA
GCGGAAACGGCAGGGCCTCCATTTATGTGCGCGCGCACGGGATGCCACTGCCAGTCCTCG
CCGCGACCTGCGCGCGCGCAGCGCAGGGCAAAGGCCAGCGCGCGTGCACGCGAAAGGCGG
TGAAAAGAGAGCAGCAACGGCGGCCAACCAGGCGCGCGCGGGCGGCAAAAGCCCCCGTGC
ATTCCCCCACAGGGTCGTCGCGTCTTTTCGCGCCATATCATCCATCATCCGTGGGCATCA
GCGCCGGTCACACTTGGCTTTCGTTCGGCTTTTCCCCCTGCCCCTGCGACCGAATTCGTT
TCGCGGCCTCGACCACGATCGTGAGCTCCAAGCGCTCTCGCCGCGGCCGCGCGAACGGAT
GACCGGCGGCCGGGAGACCGACCCGCACGGTCGCGAGTTGATCCGATCGGGCACGCACGT
AGCACCGGCTGACGCGGCAGCGGCCGGGGGACAGACAGCGGCCGTCGCGCGCCCAACAAC
AAGCAAACAGAGCAGGTGGGCCCTACGGAGAGTGACGTGGAAATTGCAGTTTATCCGCAT
CATTTGTTTTTCATTTCATTTCACGTATGCTGGATTATCATTCGACTGTGCGTGACAGGG
GAGTATTTCACGCTCCATTTTTTTGGGTTTGATCACTCCAGTGGAGGCCGAGAGGGAGGA
GGAAAGCGACGGCGAGCGGGGGCGAGGGAGGATGACGGGGAACGCCCCGATAGGGATGCT
CCCGCTCCGTGCGGCTCGTCCCAGAAAAAGCTACTCGTTCGTGTTTGCAGAACCAAAATA
AGTAATTGGCGCTAGTTAGGGCCAGCACAATTACTTGGACAACAATAATCTCTGAAGCAG
CGAAAAGAGAGAAGAATACTCGTGTTTACTCGTACATGGCAGTGGGGCAAACGACAAGGA
TCTGGGAGTAAACAAACCTTGTGAAGCGACGGAAAGGCGAGCGAGGCGAGGCGAGGCTAG
CTCCCGCTTTAGCTTGGCTACGGGGTATCAAACGGAGTATAAAAATGTCGGGCCGGGCGC
CATTCTTATCGCGAAAGGCCGCCGCAGCGGCAGCAGCGGCCGCGGCGAGGGAGCAGGACA
AAGCGGGCCGGGACGGCGACCGGAGTGGGCGCCGCCCGCGCGGGGCCCCTCCCGGTCAGC
ACCCCAGATCGCGGCCGCTCCGGTCAATCAATCACAGACAGATCCACCCGGCCACGAAAT
TACCGCGCAGCACAGTAGTTTCTTACCGTCAGATTGATTGAACGACGGCACTGTTTGGTA
TTCCTATCCGTCCGTCCGTCCAGAGAGCACAGGAAGAAGGCAGAGAAAAGAAAAGGCGGA
AAATAAAGGGCGAGAGCGAGGCGGTCAGTGACAGAGGCGGTGGATCGGGTTTTATAAATG
GGGGCCACGGAGATCCAGATCTATCCCGCCTGAAACAAACCCCAAACCAAAAACACCGCA
GCAGCAGATAAAAACACCGCAGGACAGACCGCGGCAGCCAGGCAGTGGCATTTTGCGGGG
ACGCCCCCGCGAGTTTTCTTCCGTCACTGGCGAGGCCCCTCGTCCTCTCCCGGGGAAAAG
GGACGGCGGCCAGCCCAGCTTATACATAGGGAGATTGGGATACAGCGCGAGGGCCAAGGA
AGGGAAGGGAAGGTGCGCACCACCCTCGTGCCGCTGCTGCAACTAGTATAGCCCGCTCGC
TCGCTAGCAAGCTAACCCGCGAAGGACCTCTGGGGATTGATTCATGGAGTCGCTCGTCTC
CGGCTCGAGCCATCTCTCTAGCTAGCTAGTCGTTGGTTGTTGTTGTCGTGCGAGGAAGGA
GGGAGGAGGAGGAAGGGGGTGTGAGGTTGTTTGCGGGCTAGGGTTGGTTGAGCGGGCTTC
GTCGATCGGCATGGACGCCTACGAGGCGACCAAGGTGGTGTTCGCGCGGATCCAGGGGCT
GGACCCGGACCACGCGGCCAAGATCATGGGGCTGCTGCTCATCCAGGACCACGGCGAGAA
GGAGATGATACGCCTCGCCTTCGGCCCGGAGGCGCTGCTGCTCGCCGTCATGGCCAAGGC
GCGCAAGGACCTCGGCCTGCTCCCGGCGTCCTCGGGCCCCGGCACGCCCACCTCCGCCGC
GGCCACCGGCCACTCGCCCTTCATGCTCTCGCGCCAGAACTCCGGCCGCGGCGGCGGAGG
CACGGCGCCCTCGCCGCTCTCGGTCTCGTCGCCCTCCTCGTGGGCCCCGCCCCCGGTGTT
CTCGAGGAGCAACAGCGTCAGCAATGGCAGCGCCGCGGAGGAGATGGCGGGCGTCGGGGA
GGAGCTGATGAGTCCAGCCAACGGCCCGCAGTCGCCCTTCTTCGGCGGGGGCGGGGACTC
GCTGATCCTCGACGAGCTCCACCTGCAGGACCAGCTCGCGTTCCTCAGCGAGGGAGGCAT
GGGCGGGGGAGGGCGCCAGCTCCCGCTGTTCGACAACGGCGAGTGCCGCAGCCCCAGCGG
CGGCGACGGAGGGCTCTTCCCGTACGGCGCCGGGTGGGCCAACGGCGGGCCGGGGCACCG
CAGGAGCGCGTCGGTGAGCGAGCTCTGCTTCGGGGGCGGCGACGGCCTCGGCTGGAAGCC
GTGCCTCTACTACGCGCGCGGGTACTGCAAAAACGGGAGCGCCTGCCGGTTCGTGCACGG
CGGCTTCCCCGACGACCTCGCCGGCGCGAAGATGGACCAGGCCGCCGTGGAGCAACAGTG
CCAGGACTTCCTCCTCCGCTCCAAGTCCCAGCGCCTGGCCGCGGCCGCCGGCTTCGCCTA
CTCGCCCACCGGCTCCCTCCCTGGCTCCCCCTCCGCGGCGAGCAAGTGCCTCAGCTTGCT
CCTGCAGCAGCAGCAGCAGCAGCAAAACGACGGCCAAAGGTAAATACCCACCACCCTCGC
CACCTACGAGCTCCTCGCTCTCGTTTCTACCGGCCGGCAGCTCACCGGTTGCTCTCCGAT
TCGCAGGGCCGCGGCCGCGGCTGCCGCAGCGGCGGTGGTGCTGCGGCGGCGGGGGGAGGG
GCGGGGCAGGAGGAGGGGGGGGGCGGGGCACGGCGGGCGGCGCTCTGCTGGCGCAGCAGA
CGGATCG