Contig Data
morexGenes
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Map Locations of contig_238391 (2235 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_238391

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33550 1 1004 bp MLOC_33550.1 Available Available LOC_Os11g45930.1, FRAME:+2, EVALUE:7e-27, 13111.m04594 protein NBS-LRR type disease resistance protein, putative, expressed
MLOC_33549 1 375 bp MLOC_33549.1 Available Available None





CDS Structure of MLOC_33550






CDS Structure of MLOC_33549






Contig Sequence (2235 bp)

>contig_238391 2235 assembly3_WGSMorex_rbca.fasta
GGGCGGGGGAGGGGCGGGGGCGCGGCGGCGGAGGCGGGGGCGCGGATCGGCGGCTGCGAG
AACGGGACGGCGAGGCGCGGGCGGCTGCACGGCAGCGGCGCGGAGGAGGGAGAGACGACG
GCGCTTCTCAGGAGGCGGAGGCGGTGGATGAACGGGGCGGGGCGAGAAGGCATCGGGGAT
CGGAGACCGGGCTTTATAGCGGAAATCGTGGGTGCGCGGGGAGGAGAACGATATCTGCTT
CGGCTTTTTTATTTCTTTTTATTTGATGACAGTATATCTGCTTCGACTTTGCGTTCCGGA
GTGAGTGTGAACGAGTTGCAAAAGAAACGCTCGTCTTGGATGGGGCTGGCCTCTGGCCAC
GTTCGGCGTCGCGGGTCCGCCACGTGTGAAGGGAATCCCGGCCCGGCCGACGCCCGGGGT
CCTGCCGCCCGATCGGCATCCGACGGCTGGCGAATTTGCGGTGCGTCTTCCTCGTTGCTT
CACGGCCTCGGAACTCCAGGACGCGTTGCTTGGCTGGTGGCATCAGCGCTTAGCTCTGCT
GTCGGGAGATGGTGTCTCAGGAAAAAGAAGAGAACTCTCCCGGCAGATACGCGACGGGTA
GCCGCAAACAGGGAACCTTCGATGCCGCGGCGCAGGTTGGCTGTCGCGTCGGGGAAGAGC
ATGTCGTTTTTCTTATTTTCCTTTGATTCATGAGGGGTCGCCGTCTCACCGTCTGGTGTT
TGATGTGAGGCAAACACAGTGAAATGGAAACAGCATAAAAGCATCTTCAATAGATGATAT
AGATGTAAAAATAACTACTTGTATTTTTTACATCTTTAAGGTTTAAAAACACACCTTCAA
CAAATGATGTAGATAAAAAATTTACATCTTCACCTTCTGAAGATTAAACTGCTCCTTCAG
TAAATTAATATAAAAACGTTTAAGTTATTATTTTAATTATCTAAACACTCTTATATTAAT
TTACATAGAAAGTACAATACTGCGATATCTCTCCCTAATAATAAAGCACCGATGACTTCT
GTCGTCCGTCGTCGTCACTTTCGCACAAAAGTCTCTTCGCTTCTAGGTATTCAACCCGCA
GTCCCTATGTAAGTAGATCTCGAAAAAAACGTTTCGAGTTTACAAAATAACCCTTGCGTC
ATGTAATAATTCCGCCCACGCTCCTTATCCAGTGGCACAGAAGGTCGACGCTGACCTCCG
TCGGAGCTTCGCACCGTCGCCGCACGCCGCTCCACCTTGCTGCCGGCGATCGCAGCGTCG
CGCCAGGCCAGGCCCCCGCCTTCCTCTCGCACTGTTGTCCCTATCTTTCCTTGTCTCTCT
CCCTCACTCGGTCTCCCTCTTCCCTGCGGCGAGGCTGCCGACATGGGAGCCCGAGCTCAA
AGCTCCGTCGTCGACCACCTCGCCCCGTCTCTGGCCAGATCCGAGCTCGAGCCGCCCGGA
TCTGTTGACCCCAACCCAGACCCACCTTGCCCCGGCCTTCTCCGGCCTCGCCTCGCACCG
CCGCCGGCATCGTCGCTGCCCACGGCCTCGAGCTCCTCCATCACCGGATTTGTTCGACAT
CATCCCGGGCTGGTGGCGGAGAAAGTGGCGGCGACCGCCTTCGCGAACGCCGTCATGGGG
AGGCTCAACAGGGAGCTCGAGAAGAAGTACCAGATGTGGAAGAACATCAGGACCGAGATC
TCGTCTCTTCAGACAGACCTCGGCATCCTGACAGCGGTCGTGGACGACCACCAGACCATG
CCTGCCGCTCCACGCACGGCCGTCACTAGGGTCTACGGCAAGGAGATCCGCGAGCTGACC
CATGACATCGAGGACTACATCGAGCGCTTCCTGCACCACATCACCTGCAAGTCGGGCGCC
TCCCGGGCTCACCGGTCCGTTCACGCTATCAGGACGTTCCGCCTCCGTCTCTGGTTCGCC
GCCAAGATCAAGGAGTTCAAGAGCCGCGTTGCTGAAGCACACGAGCGGGCGTTGAATGCT
GCCATGCTCGCTCATGGTGCCCAAGCATCCAGCAACGAGACCGCACGCCAATCAATGGTA
TTCGCGTAGGACTGTCATCACCATGTGGGCATCGAGGAAGCCGTCATGGAGCTCCGTAGG
CTGCTCGACATCGAACCAAACCAAGGTGAAGCAGAGGGCACACCGGCTGCAGCTCAGGCT
CAGCTACGGGGGGGGGGGCCGGGGGGGAGCGGCCGGGCGGGGCGGGGGCCGCGGGGCTGG
GCGGGGGAGAGAACG