| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_237375
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_33439 |
1 |
2312 bp |
MLOC_33439.1 |
Available |
Available |
LOC_Os04g57800.1, FRAME:+3, EVALUE:0.0, 13104.m06062 protein BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
CDS Structure of MLOC_33439
Contig Sequence (10606 bp)
>contig_237375 10606 assembly3_WGSMorex_rbca.fasta
GGTAGCTCCTCCTCTTCCGCGCGCCCTCTCCCTGTGAAGAGGCAATGGTCGGAGGAGCCG
GAGGACGTCGTCGCCGTCAAGGAGGAACCCGAGGAGCTCGGCTTCCGCGGAGTCGTCGGG
TCGGAGGACTTTGTCGCCGACGTGGATGCGGTTGCGGCCGCCATTGCCGAGGGCAGCTTG
CACGAGGAGGCAGAGCGCCGGCGCCACGACGAGGAAATCGAAGACCTCCAGTGGCGCAGG
CGGTCGAGGCCAACCTCGCCACCGAGGAGCAGAGGGCGATGTACATCGATCTCTGCAGCT
CCGGCGATGAGGACTGAGATCGCACTGATATAGTATGTAGTATGTAGTATGAACTTTCCG
TAAAACTATATTTTCAAATTATGCAGTTTCATTTACGGTTTCTGTTAGACCGCGCTCATT
TTCGATCCGTAAACGAGATCTTCGTGAAACCGCAAAGGATCGAGATTTTACAAGGTATGT
TAGAGTTGCTTTTACACAACGCCAAATAGTACTCCCTCCGTCCGGAAATACTTGTCCTAA
AAATACATATAATGAATGTATCTACAATTAAAATAAGTCTAAATATATTCATCTCTAGGA
CAAGTATTTCCTTACGGAGAGAGTGTCTAAAAATTAACCACCAACCGTAGCAGATGTAGT
CGATAGTGGTATTTACACAGCCCACAATATCCGAGCTGTCCAATAAATTAACACCAAGAA
CAGAGCATCTATACATCTATATACATGCTGTCAGCTGTGAGTCGTGGTTGGATCCCATAC
GTAGCTAGTAGGAGTACTAGCTAGCAGCACTAGTAATATAGCCGAATCTTGTTCCTGCCG
AGCTTTGGAGGCATCTGCACGCGTGCACGCAGCATTATCTTCATATTGGTATCATGCATG
GTACTAGCATTCTTCTTGATTAGCCCTCTGAACTCCTATCAACTTCTTCCACTGATTTGT
CCCTTAGTCTTTGTTTTTGCATGTTAAATGTTTCTTCCTCGTATATATCTGAAGGTTCTC
CGATCGGCTACATCCATTGGCATGCCACCAAAAAGCTGTTTGCAAATGGTCCATGCCACT
CATCCTCGTCTTTTGGTACCATCAATCACACTTTGGGCTCCCAAATGATCTAGGACTCTA
AAATGTGGCTAGCAAGCTAACAAAGTCGATCGTGTAATGTAATCCGGTGATAAATCTGCA
TTTCTTAAACGGGGAGGATAGGAGACAGTTCCAAGATCTCGGATAATCTGAGTAGCCGAT
GTGACAAACGAGGCATAATTTGTGTTTTGGACTGGAATGGAGACCGGGCAGTTGCATTGG
ATGATTGGGTCATGACAAAACAAAACAACACTCACGGGCAAAGTTGAATACGCAGTAGTA
CATGTGCCATGCTGTCCTCCTCATTTGTTTCTCGCAGTACAGGTTTCTCTAGGCCTGTTT
TCTTTTTCAGTTTTGAACAGCTTTGCATGCATAGCATGTCTGGCCAGATTAGTAACATTA
TGAGCTGGAGAGGTAACAGTGCAAGAGATGAGAGAGGGTGAAGGAAGGAAGAGCCGAAGA
TGATCCTGTGGCATGCATTGTTCAGATGCGAAGCTGCAGTGGCAAAGTCGTCCATCGACC
GATGCGGATTCTGAAATTACGTGTGAAGCATCCTTGTGCACAGTGTTAAAGTTCAGACCA
CACAGTGCCACTGTTCTGTTGGATTGACAACAAAGCAAGGGGTAACATTTTGTTTGCTTG
CTCTGGTGCCTTCAGAAGGCAGGGCGTCCTCTTTCCCCTCAATCAACTACAACTCTGATT
AACCTCAGATGCAGAGGCCAACACTATACAAAGTTCAGAGAACCGGGGAGGGTGACTGTT
TGACGTCGCATGCTGCGGCCGGGTCCATCATGCCATGCACCAAGGTTGGTCCTGGAATGA
TTTTGAGAATTCCGGAAAGATATAATATGGTTTCGGAAAAGTTTACATGTATATATAATT
TTTTCGTAAGGTTTTAAAATTAATTCTGAAAACGTATAGATAATCTGAGATTTTGTTTGT
GAAAGAAGTCTCTCTTAGTGTGCTAACTCAAGAGGGCAGCCCAAAGTGAAGTGTCCCTCT
TTGAAAGGGGGGCGAATTGGACAAGGACAGTGTCCTCCACTCCTTGGTTTGAACCAAAGG
CGTCCTCCTCCTTTTGGTGTGCCCTCTCTCTACCTCTTCACATGTTGAGAGACCCTCCTA
GCTAGAGGTACACCAAAGTCCTAATGTGATCCCTCCCACATGGCTATGCCCTGATCTTAG
TTTAATTGATCTAAAGTCTAAACTCCTAATTAGACGGGCTTTAATCCTGACATAGTTGGT
CTAATTAGATTAGACTCACGTTGCAAGGCTCTTTCTCTAGTTTTTTTGAAGCTCTTTTTC
CTGAACATCGAAGTGATGTCTGATTTCTACTCCCTCCCTCCCATAATATAGGACGAAAAT
GTATTATACCGTGGGACGAAAGGCGTACTTTGGAACACGTGCATAAGTTTGAGGGGTCTT
CTACTTTAGTTCTTGATCAGTGAATCATCATAGAGAGATTCAAACGGGTAGGAGGTATAC
AAGCATAGTACATTGCTTGTGCTACTCTACTATCAATGAGGTCATCATTACCCGTCATTT
TTATAATATTCTTGGGTGCGATCATGTGGCATAACATTTCTATTGCATAAATTTCTATTT
CGAAATCATCAGCAAAAATACTTGCTCGGATAGATTGTATTGGATGAAAAGTAATCTTTC
ATAATCTTCTCTTGGCCCTTGTCCTCTGTCTCCATTGAGGTACACGCGGCCAAACTGTCA
TCCTTGTCTAGATCGAAAGTCCTCCTTAACGATCACGGCAATGGACAATGCTCACAAAAT
GATATAGTAGAGGGAATCGGGCTAGAGATGCTCTTAATTATCGGCCGGATGGCATGAGCG
GATTATAGTTATGCTGTCACTTGTCAATGGATTCAATAGCTAGCGAGCTAGCAGCAAAGC
TATAGTTGATGTTGCTGTTCTTGCCGGTTAAACTTGGAGGCATCTGCATGCACGCAGCAT
TCGAGATCTTAAGAGCATCGTCTACAGCCGGAGATCTTAGAACACTACAGCCGGTCGTTT
CAAATAACCCCTCATACGTACGTGAATGCATGTGGTCAATGATCCGACAGGAAAAAATAA
TAATCCAACCGGACCTCTAATATCATTCCTGTATGACTGGGTGGTCCAAGAATCCTCATA
TTCATCTCAAATATGAGTAAGATATGAGGGCTCGCGGACGCACCCGGGCGCATCCCGTCA
GTCCACGACATAGGACGCCGTCCCAACCCGGACCACCTTTTCTTTTCTTTTATCTCTTTC
TGTCTATCAATCATGTGCAAGTGACCGGACATATGAGAAAGAAAATGAAGAGTGTGATTG
CGCGGATAGACAAATAGAGGACACGCCCGATCATTGACCGGGCGCGTCCGCGGACATTTA
GGGGGTCATATTTGCAATGTCCGACAGTGGGTGCTCTTAAAAGCGAATGCGTCTGGACGT
GTTTGCGGAGAGTGATAAGACACGTCTCAAATAAACAAAACCGCATCTCAACATCTTATA
TAGTCATACTGGGTTCTCAAATTCATACAAAATCATACAAACGAGAAAACCTAGGCACTA
CCTTGATACCTAACTACTACCCCTCGTGAGAGATTCCGACTATCTCCGTGCCCTCCGACG
GATACATGGGCGGCAGCTGTAGCTTTGCTGTCTCCGACTGCTCTCCTCTGGCCTCCTCCA
ATGCTATCTCCGCCTCGAACTCGTCGACGAGCACATCGGCCTCCGCCTACCTCTACCGGA
TGAGCTTACGGTTGGCCGACACCTCGAGCTCATCTTGGATGGACTCTAGGATGGCCTGCT
GCTCCGCCATCTCCTCGGCTTGCGCAACGATGACCTCCGCGTCCGCCTCCGCCAAGTTGA
AGCCCGTAGAAGGCTGGTCCACCTCGTCCTCCTGCGCACCGGTCATGTTCATCGGCTCCG
CCAACTCCTCCTCCTCCGGCTCTCGTGCGAATCCGGAGGCAGACTTGCAGCGATGCGAGC
GGCGCGCCTCGCCTGGATCTTCGCTTGGTTCTGGATCGTGTGCTCCTGCGTGAGCATCAC
GTACGTGGTGACACAACGGCGAACCATATCGACGCCGGAGAGCGCGGGAGAGGAGGCGAT
AGGCTCGGGTGACGACAGAGAGAGAGAAGGTGGATGTGCTAGGGTTGGGGGACACCGACC
GGTTTAAATAGCCGAATTTGATATCAGGCAACAAGCCGGAGCGGCGCCACGCGACGTTCA
CACCACGGCGACGGTCGACGCGCCCGTCGGACCGTCAGATTTCCTGGCGAGTTCGCGTGG
GTCCGGTTGAGTCAATTTTTTGTGATTGGTCTATGTCCGGACGGCCTGCCCGAGCATTCG
AGACGGGTCCGGTAACATCCCCGGTGTTCATTTGATTTGTGGCTTGGTTTGTTAGCTATT
TTGTGTGCTTATCGGCTAATTAACCTAGGAGCGTGATCTTGGTTGCCCTCATGCCACTTG
ATGGTACGGGGAGCCGGTGGACAACTCAGTTAGCACTGAACAAGATATACCGTTGCTGTT
GTTTTGCATGTTGTTTCTTCCTCATCACTCATATAAGAAGGTTCTTGGATCGGCTCCATC
ATCCATTGGCATGTCACCAAAAAGGTGCTCGCAATGGTCCATGCCATAGCGTGCTCCAAC
TCACCCTCCCCTTTTGGTACCATCAATCACACACTGGCTGGGCTCCGACATAGTTTATAG
TCATGAAATGCGGCTAGCTAGCTAACAAAGTCGTTCGTGCAATGTAATGTAATGTGGTGA
TAAATCTGCATTTCTTATATGTGGAGTACAGGCGACGGTTCCGAGATCTCGGATAATCTG
AGTCACCGATGAGACGAACCAGGCATAAATCGGCAGTTGCATTGGATGATTGGATCATGA
CAAAACCGCGCTCACGGGCGAGTTTAATACCGAGTACGTGTGCCATGCTATGTATGGAGG
CTCATTATTTTTCCACCAAGTACAGGCTTCTCTCTGCATGTTTTCTTTTCAGTTTTGAAA
AAACAGCGTTACATGCATAGCATGTCTGGCCAGATTAGTAGTAAGATTATGAAACTGGCT
CTAGAGATGCCAGAGGGTGAAGGAAGGAAGAGCCGAAGATGATCCTGTGGCATGCATGCA
TGCAATCAGCTCAGATGTGAAGCTGCAGTGGCAAAGTCATCAGTCGACCATGTATGCAGG
TTCTGAAAATTATAGTATGTGAAGCAGCATCTCTCTGAAACAGTGGTGAAGTTGAGCCCA
CACAGCGCCGCTGCTCTGTTGGATTCGCAGCAGAGCAAGCTCCTCTTTCCACCTCAATCA
GTTACCATCTGAATCACCACCGCTGTGATCTCTGACGAGCCCGGCCAACACCGGCACTAT
AAAGAGTTCAGAGAACCCGGAGCCTACCAAGGCCAAAACGCCGATTTGTTTTCTTCCTGG
GAATCGAATCATGCATGAGCCGCTCCGCTCCGCCATAGATTTCCCCCTCCTTCCACTGGG
ACACATGCACATGCCGGACTGCCGCTCAACACTCTGAACCATAACTTGTCTACTTTAAGC
CGGACGAGTGCACTGTGTGCCTGTGACTCGCAGCTCAACTGAGCGAGCAAATCTTCTCGC
CTCTCGCCTCCCCAGACATATTATACCGCCACCGCTTCGCATCGCTTCTCCGGGTGCAAC
GTCCATTGCTTCCGTTGTTGGTTTGTTGTCTCCCACCTCGAGAACCATGGACGAGGCCTG
CGACCTCAAGGTGCGCGTCAATGGCCGCCACACGCTGCTTCTCCACCAGGTAGGCATCTA
TCTGTCTGCCTCGGATCGATCAAGAAAGCATGATGTTTCTCGATTGCCGGAAATTCTGAC
TGTTGCAGCTTGTTTGACTGATTGGTTGGTTGGTTAACAGAGCGTCGTGTGCGCCTTCTC
CGGGAGGTTGAGAGCAATGGCGGCGCGGGAGAAGAAGGCAAAAGGCAGGGGAAGAAAAGA
GGCGTTGGTGTCCATTGAGCTCGACGGCTTCCCGGGAGGTGGCGAGGGGTTCGAGCTCGT
GGCCCGGTTCTGCTACGGCGATGGCCGCCTCCCGCCGCTCCGACCCGCCGACGTCCCGCT
CCTGCACTGCGCCGCGGCGTTCCTGGAGATGACGGAGGAGGTGCGCGCCGGCAACCTCCT
CGCACAGGCGGAGGCCTTCGTGGACGACGGGCTCTGCTACTGGACGTGGGCCGACGTGCT
CGCCGCCGTCAAGAGCTGCGAGTCCTTTGCCGCCTACGCCTCGGGGCTCCAAGAGAAGCT
GCTCTCCGCTCTGTTCTCCAGGACCGACGCGGGCGCGGAGACGCCCAAGTCCAACTGCTC
ATCATCGTCGACGTGCTCGTCGTCGTCGCAGGAGACGGTCGGCGGCAGACCGTCGTCCGC
CGCCAAGACGCCGGAGTCGGTGAAGCCGTCATGCCTGAGCGGCGGCAGGGAGTGGTGGTT
CGACGACGTGGCGTCGCTGTCCCCGCCGACCCTCGAGAAGGCCATGAAGGTGCTCGGCTG
CCACGGCGCCGACAACAAGAACCTGACGCTGACGCGGTTCCTGCTGCACTACCTCCGCCG
CACCGCCACGCTCCGCAAGGCCAACGACTCGGGCGGCAGCATCCTCGCCGGTCTCGCCGA
CACGGCCGTGCACGGCGTGGCGCTGGCCGGCGGCGGCGGGGCGTTCTCCTGCCGTGGCCT
GTTCTCGGCTCTGCGGACCGTGTCGGCGGCGGGGCTGAGCAGGGAGTGCCGGCGCAAGCT
GGAGACGCTGGTGGGGCGGATGCTGGACCAGGCCACGCTCGACGACCTCCTCGTGTCCGG
CGACGGAGGCGGCGTGTACGACGTGAGCCTGGTCATGCGGCTCGTCAGGGTGTTCGTGAG
CTCCGTCGAGGAGGCTGGCTCGCCGTCGTCGTCGCAGAGGATGAGGAAGGCGGGGAGGCT
GGTGGACAAGTACCTGGCGGAGATCTCGCCGGACCAGGGGCTGCGGGTGTCCCGGTTCCT
CGCCGTCGCCGAGAGCCTGCCGGACTCCGCCAGGGACTGCTACGACGGCGTGTACAGAGC
ACTGGACATCTACCTCGAGGTAAGAGCCGTTTCTTCAGTTTTTTTTTTAAAAAAATTCGG
CTGTATTTGGAGAAAATTCGATTCATATTTCAAATTTGGGCAATTCATATTTGAAACCGA
TTTCTCAAGAAAAAACTATTTCGGATCATACTTGCTCATGATGATTACCCGGAGGTTAAA
AAGTTGGATGAAGCTGAGCTCTAGCTAATGATAGGCCAATCATAAATATTGCAGTAAAAC
ATTCTCTGCCATGATACTCCATGGTGGTGACTGGTGAGAGACGGCAAAGGTCACCTAGAT
TTTCACCTGGCACTGTGCACATTTTTTTTTTCAATTTATTATGAGCCCACGATGATTTAT
TTTTCAAATTTTGCCAGAAAGAGGTCATGATGATAATCTTCACTTAGAACCGAAAAGCAT
ATGTTTTAGCTACCGAATACAAGTGCAATCTCCAAAATGCAGCAGAAAAATATATAACTG
TAAAATGGATAATGACAAACCTAACATTCTATTTTATGTGTCTACATCTAATTAGTTAAC
CTAGATTTTCTTGTACTAGCTTTATTTTGATGAAAATCATGCATCCTTCGATCCATATTA
ATTGACGGCAATTTGGTACAAAGTTGTAGGGCGTACTTCGATATAAAAATTATGATTCCT
CCTAGCAAAACCCCAATACTTTTACATTGTACACATGCTACGAAAATTAATTAATACGGA
TAGAAGGGAGTATCATTTTAATTAGACCAGTCATAATCATCTACTCCTATTTTACACCAC
ATTTTTTTGCAATGATGCCTTATGCAAAGCGGCGGAATAGAGGTTGGTAGCACTATCATC
ACACCACCATGGGTTGATAGTGATGGACAGACAGGTGGACTGTTGAGAACTTTTGTGTCA
TGGAGTATGGAAGCAATTTCTTTGCGCTGCTGCGATGCCTTTAGCCCTTTTTGGTCCATC
AGATTAGATCTCGAAACACTGTCACCAGAGACCACACTAACTACCCCTGTCGTCCGCTTT
ATTATCCAATCACGTCTTATCCTCTGGTGCATTCAGTCACCCTGCCTGTCAATCCATTTT
ACATGCTGAAAATCTCATCTCTGTCTGAACAAATGCACTTGCTTCAGAGAAAGAGCACCT
GCAACATCTCTGAACTTTGCCTCTGCTTTCAGCAAGTTACAACACATGTTTGGCAGCATT
TTGCTCTGCTTGAAGTGACGTTTTTTTGTTTTCCCTCATGCATTAGAGCATCTTGAGCCA
CAACTTGCAAATTCGGACCCTCAAACGCCTGCGGCCATACTTTTTATTTTCTTCCTCATA
TGTTTCCTATTTATCCGTTCGCGCATCCACACTTTTTATTTTCTTCCTCATATGTTCGAT
CATTTGCACGTGATTGATGAAAAGAAAGAAAAATAAATAAATAAAAGAAAGAAACAAGTG
ATTCGGGATGGGGTCGCGTCCTATGTGGAGGACCCTCATATCCTCCTCATATTTAAAATG
AATATGTGTGTTCGTGAACAACCCGAACATATAGGGACGATAGGAGGGGTTTGATTGGAT
TATTTTTTTTCTACTGTCCGACTATTGTTAATACGGGTATGTGGACACATGAAAGGTCAT
TTATTTGTACCGAGCTCCAATAATTTTCAATAATTTCAGAACTGAGATTTCGCATTTGTG
TTATTACTGGTGATGGTAGCCAGTAGCCTTTTTTTTTTGCTCGAGAATACCTTCTGCCAG
ATTGCTTTTGGTTTGCTTCTTATGTCTTCTTCCTTTAATGAACCACCTTCCTGCCCTTTT
TGTCTGTTCTTTTTTGCTTTAGTTTCCCTCTCGCCCACGGCATTCCGTGCACTAGCTAGC
TACTGTAGTACGGAGCTTCTAAAGCTCTGTTCATGAAACTCCGCTGAATTTTGTAACCTC
TTAGTTGTATGTATCGCCTTTATTCTAAAATTAAATGGAGGACCTAGAAACATTTTATGA
CTGCTATTTTTCAGTTTTTGGATGACGCACTAAGATGAAAAAAATTAAAAATAAATACAA
AAATGCAGCTTATTGAAAAACTGATTCATGGTTATATTATGCGGTGGAAAGAGTATAATG
CGTGTGCCTTTTGTGAATCTATGCAGTCTCATGCCGAGCTGACCGTTGAGGAGCGCGCGA
CACTATGCCGGTGCCTCAACTACGAGAAACTGACCCTCGAGGCGTGCAAGGACCTGGCGA
GGAACCGGCGGATCCCGCCGAGGATCGCCGTGCAAGCATTGTCCTTGCAGCGGCCACCCG
ATGCACTCAAGAATCCCTTGTCATCGCCTACACCGAAGCGGGTCGTGCTGGACGACGAGA
AGGAAAAGGAGGTGCTGAGGCTGAACCTACGACGGATGCAGGGCCGGGTGGCGGAACTGG
AGATGGTGTGCAAGGAGATGAGAGGACAAATGAAGTTGTCGCCCCGGGCTGCGGCCAAGG
GCAACAAGGCCTTGGCTGGCAGGGGCTTGCCTTGGATGTGCTAGTAGCTTTCATAATGGA
AAAAAAGGGGGCATGATTTTTGTTTTGTGGGGTGAGGCTGTCATGCAGTTTGACCCTTTT
CTTCCTCTTGATCCTTTTGTAAAGTTGTTTTGCTGCGTTGATATATTTGGCTTGTGCCGT
GTTAATTGCTAATTGCAAGTGAAGCATATGGGTTATACTAAATATTGCCCTAAATAATGT
ATATAGGATTAAATTTTTGAAATGAATAAGATCATTAAGGAAAAGCAAACTATTTTCTCC
AACGAATCAAACTATAATTAAAGTATATGTTGTTTTTCCGTTATGAATTAGTTGATTCAT
GCATTGGATGTCCTAAACGGTTACCATGCCAAGTTTTTTGTTATTATACATCTCATAATC
TAAACAATACAATGAAAAGTACTAGGCATTTTTAAGGCATGTCTTAAAACACATACATGT
GAGGAAAAGTAATGTGTTTGAATCAACTTATAATAACAAATAATCATATTATAGTGCTAA
ATTTGCATACAATTAGAAAAAAATATAAATAACAAAACATAAATGATGGTAATGATTGTT
TTTTCAATTAATCTAAAATTATGATTATGAGATAAGGAGGAACATATACGATTTTAGTGC
TTTGCAAATTTGTAGGTCACCTAAACACAGAATAGTACTATATGATAGCATAAATAACCC
GGTTTGTCATAACTTAGTGCAACCAAATTGCTCACTAACTCAATACAAGGACCGTCATGA
TCGTAGATGATGTTGAAGGTGGGGACATACATATGATTAATTGCGATCTCCTCCATGAAT
ATTCCGTTCTCTTAGACATAGGATTGCGAAGCATAACATAAATAAAGACCGAATGTCGGT
GAATACTCACAACCTATGCCATAGGTAGGCTAAAGTCGGTGAGAACGGAAGGGACAAAGG
TGGGCGCTCGGAACGAGGTTGATACACACATGGGACGCACGATGTA
