morexGenes - Barley RNA-seq Database

Contig contig_236897

Source Contig contig_236897

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_236897 (1076 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_236897

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_33388	1	500 bp	AK355271	Available	Available	None

CDS Structure of MLOC_33388

Contig Sequence (1076 bp)

>contig_236897 1076 assembly3_WGSMorex_rbca.fasta
TGTTACAAGAAATAAACTTTGGATCCATTAATTCCTGAAACAACGGTCGANNNNNAGAAA
CAATTTGCTTGTTGCAGAATTTTTTTCTTCGTCTTTCTGTAATATAGGTATTTTTACGGA
AGAATTTTTTGCAACAACGATCGAGTTTTAGAAATTTTCGCAACGAAAGTCACGTTGCAG
AAGCACTACCCAGCCGGGATCCATGCTCGACTGAGAGTCGGGCACGCGGGCTCGTCTCAG
GATGCTGCAGGAACGAGCGGGGAAGCTCCCCGGCGGCGGGATCTGACCACAGGAGGCGGC
GTGATCCCGTTGCTTGCCGGACTGGAGAGGAGGCGGCCGGCGAGCTCTTGGTGGCGGGGC
GGCTGGCGAGCTCTTGGCTTGCTCCGATGGAAGTCGTCGTCGTCACGTCTGGGTTCCCTT
CTTTTGCGGTCAACTACTTCCAAGATGCAGAAACAACGTCCTGAAACGATGAAATTGTTT
CAGGAAAACGGTCACGGCTCGTCCGCCCGGTTACGTGGTAAACAAAAGAGACGATGAACA
CGAGAGCAGGATGAGCCGGCTGGAAGGTAATTGTTTAGTCCGTAGAGAAGCATGGTTCAT
GAGTATGTTTTTTCTTCTGTCGTAACACACGGACAATTTATAACGTTCGGTAGTTATAGA
AGTCGGATTTGTGAAACAAAACTGAAAAGAGAAGTATCTGTTCGTTTACAATCTCCAACT
CCAGTCATACAACGAATCGCTCATACGTACGTATGCACAGCTTCAACCAAAACTTACACT
ACTGCACTTGACCTACAAAGCATGAATCCACCCACGTCTACCGGACTACGGGCTATGCGC
CGGCGTGCTGGGGCGGGGCAGCGGTCACGCGGCGCCGGCACCGATGCAGGCGAAGGCGCG
GACGCTCCTGGCCTTTGGCAGCGGCAGCCGCCGGCCCGGCGAGAGCCCCACCTGGCCCGC
CAGCTCCTCCAGCGACCGGTTCCGCCCGTGTCGCTGCGTCGACGCCGGGGCGGCGGCGGC
GGCGGGGGGCGGGGAGCGCAGCTCCTCCCCCCCCCCGCGCCGGCCCTCGCTCGTTG