Contig Data
morexGenes
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Map Locations of contig_235453 (4846 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_235453

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33219 4 1144 bp MLOC_33219.1 Available Available LOC_Os08g33710.1, FRAME:+1, EVALUE:7e-121, 13108.m03517 protein ribonuclease T2 family domain containing protein, expressed
MLOC_33482 3 1276 bp MLOC_33482.2 Available Available LOC_Os05g02310.1, FRAME:+1, EVALUE:3e-137, 13105.m00195 protein soluble inorganic pyrophosphatase, putative, expressed





CDS Structure of MLOC_33219






CDS Structure of MLOC_33482






Contig Sequence (4846 bp)

>contig_235453 4846 assembly3_WGSMorex_rbca.fasta
CTAGTAAATATTTCTTGGCAAATTTCCAAAGTTTCTGATCCAAAGGAAGCTTTGTGAAGC
AAGTGCTAGCTAGGAGTGACATATTTTACCAGGACATTCTCCTGCCTATAAAACCTCTCT
AAACAAATGTTGAGCTTATTTTATTTAGCCAATTATTCCCAGTAATTCTTCTAAGATTTT
GTCCAGCAGGATGCTGTGTGAAGGAAGTGCTTGCGGGTATAAATCTCTGTTGTGTAGCCC
GCTGGCGAGTGTGTGTGTTGAGTCTGAGCTCAAGGAAGGGCGTTCAAGCGCTGGAAAAAT
CACCTCACCGTGTCCCTGTTCTTCTTCCTTCTCTGATCCGACAAGGTGTTTGTGCACCGG
GGAACCCTGGGCGTTGTCGCTCTCGCGTTTGCTGGTTGTCTCCGGTGATCGCCGGAGCAT
GGCGGTTCCATTTTTGTCCTGACATTTGGCATCAGAGCTAGGTTGAGAATGAGAGGTCGC
CGGCCATGGCGCTCGTGCCATACTCTGGTGGATCGGGGACTGCGATGGCGACGTCGGTCC
CCTTGCTCACGGGCGCCCCTTGCTCATAGGGGAGAACTTCAACACCTGGGCCATCAAGGT
GGAGGCCGACCTGGAAGCCGTCGGTCTCTGGGAGGTGATGGTGCCGCCGGTCTCAAGTTT
GCAGATGTGAGTGGTGACTTCTGTGTATTCCTCGAGCTCGAACTCGAGAACAAAGGAAAA
CAGAGGGTGCTCTCACCACAGCCGCCGACGTCGCCGAGAACGAAAGCGCCGCCGCTGCTG
TCACCCAGAACAAAAGCTCTGCCGTCACCGCTGGCTCACCACCGGAAACGAAGAGGAGGG
AGCAACACAGGTTCAGACAGGGATACTCATTCAGATAGGCACGGGGATACGTTTGACCTG
ATGCACTGACAAGCGGGGCCCGTGCTTACGTGGATAAGTTGTGGGTCCAGCTCCGTATAG
CTAATGAGGGCATCAGTTCAGATTAAGGGCCATGTCGTGTGTGGGATATTTCCTGGTCAT
AAACATCGCACTGAGGCAATTCAGACGAACGACGTCGCACTCCTTCCAATTCACCTCAAA
AACGTCGCACAGGAGCCATTGACCCGCGTGGGTGTGTGTGTTGGGTGATGGTGATGGTGG
GGGTGTACAAGGACATGGCTGAGCCCACTAAACCCGGACAGACCTCGGGCTGGGCCGGGT
TTTGGGATGGGCTTGTAAAAGCCTGACCTTCCTGTCTCAAGCCCAAGCTCGGCCCGAATC
CTGAAATACACTCTATTTTCAAGCCCGAGCCCAGCCAAAAATTAAGCCCAAAGCCTGGCC
CGAAAGCTGTTTTCTAGTGTACACACGTGTAAACCCGACCTGAAGCCCGAAAGCCCGACC
CAAAATACAGAATAAGAGAAGCCCGAGCCCGGTATGAACTACCTTTCGGGCTGTAAAACA
AGGCCCGAGCCCGACCCGACCTGGTTTTTTCGGTCGGGCTGTTCGTGCCCGGGTACAGAG
CCCATATATCATTAACAAACATCGAAAAACAGATCAACCGAAGAATGCGTGGGAGTATAC
CCAGTACTAAAAAAAAATCTAGTAATGGCACACGCACTACCGAAATTTCCAACTTGGCTG
GACTTCTCGGGGCAAAGCCATGTTTGTGGAGTCCTTTTTGTTGGGCACTCGATATGGTCT
TTGATGGCACTCGGTAAAATAAAGTGTATAAACGAAACAAAGAAGTTGAGGGTTATGCCA
CGTGTCTTTTCTATTTGCAGACCTTTTCTTTCTTCTACGTTCTTTCTTTTCTCCATTTTT
TCTTTTTTACTCTTTCCCATGTTTTATTTGGAAAGAGAAAGAGAGAATAAAAATAATATA
CTACTAGAAAATGAAATATATAAGAAAAAAATAAAAAAAGGTATGTTGGGCAAGTGTTTT
ATGAAAAACACTTGAGAAAGCGGTTCTTTGCCGACAAAGACATGTTCGTCAAGTGTTTTT
TACGACAGACTCGGAAAATGACGTGTTTGTTAGATGTCGGACATAATACACCTGGCAAAT
CTAACGACTCGGGAAAGGCGGTTGCAGCAAAATGACGCCTTTCTCCTTTGATGTTTGAAG
TGTGAACACCACCGGCTCCTCCGAAGTCTGCTTTCTTTTGGGTGGGGGAGATTGATTGGC
TCACAAGTCCATTCACAAAGATAGTTCGGTACTCCGTTGGCATGGTATTGTTGTGACGCG
TAGTCTCAGTTCGTGCTCACGGCCGGTGGCAAGGCATCTATGAACTGTACTGGAATATCT
GTATGAAGGTTCCTCTGTCGTGTCACAAGCCCATGAGTGTAGCTGCACACCAATGATTAG
TCCTTCCCCAGATTCAAACGTGCATCAAGCAACCATAAACAAAGTGCATCAAGCAACCGC
GGGATGTTTAGTTGATTATGTTACTTGTGGTAGACTCTGTCTATCCGGGCTTAATTAATT
TCTGAACGTTGCATTTTCTGAATGTATGTATTCAGATTGTTGTACATTGTTATTGTTTTT
AGTGGGGCATGCATGCCACGTACGTCTGCCAACTACAAAGTGTGTTTGTGCCGTGCGTGC
TTGTTAAAAAAAACTCTGGAAATGGCATCATCGTCATAGGAAGATGGAGTTTTCTTGCAC
GGAAAGAAGACATGCATGGTCACCATTAACTGTTCCTCTCTCGAGATGTTGTTGGCTTGG
CCTCGATCGGGCCGCTCGGTATCAAGATCCTCTAGTACCTCGACCTGAGTGATGATGGAG
TGAATGGGCCGCAGAGTCGGCACGCCACGTACATGGACGGACCACACCACACCACGGGCT
CTCCTCTTCCCATCTTTCCCACCGTGACAAGCACCCATCAACGGCAACAGCAACAGCAGC
AGCACGCCGCTGCCGGCAGTATGAACGCCCCTGATTTACACAGCTCCTCAGGTCCCTATC
CGCATCGACCACACACGGACGCAGTTCGGGGCCGGTCGCCGTCGAGCCCGCCGTGCCGCG
CGTCCACAGCCATGCACACACACGCGAGCCAAAAGGAGCAAGCAATTAACCCCCCCGCTC
CCAATGGAATATGCCCCTGTCGTTGGCTCGCCGTCGACGCGGGCGCCATCCACACCTGCC
TAAAAGCACCCTATAAATCCACCCATCTCCTCCCCAAGAACCATCAAACCCAGACAGATA
GCTCCGCAGCGAGTACCAAATAGATCGATCCAAGCAAGCCATGATGAGACCCTGCTGCCT
CTCCCTGGCCCTCCTGGTCGCCCTGAGCGCCGTCGGGTGCGCGGCGGCGCAGGCGGCCGA
CTACGACTTCTTCTACCTCGTGCTGCAGGTCAGTATATATATCTCCCCGGCCGGCGAGCG
AGCCCAGTCCAGTTCATCGTCCATGCATCGGTATGTGTATTCGTTGGTTGGTTGCTGATG
GTTTGTGTAACTTGGTATGCATGTGTGTGTGTGTGCAGTGGCCGGGGTCGTACTGCGACA
CGAAGAAGAGCTGCTGCTACCCGCGGACGGGGAAGCCGGCGGCGGACTTCGGGATCCACG
GGCTCTGGCCCAACCGCGACGACGGCTCCTACCCGCAGAACTGCAACCCCGCCAACGCCT
TCGATCCCTCCAAGGTCAGCCATTGTCGCCAGCAGATATTTATCTTGATTTCATTTTCGT
CTCTGGTCCAAATCCAAACAACAAAATCCAACGGGACTTGAGAGGGACAGGGAAGAAACT
CGAACCCCTTGTTTGGTAGTAGCTTCGTACCACACAGGCAGGATCACGTCTCTCATTTGA
TGCCGGATCCTTTCTCTGAAGAAAATCATGCAGGATACAGTATATTTTTGTCCGGAATCA
ATGCCGTTGGTTTATTTTACGGGTCGAAAGCAATCCAAAATCGACGCTGCATGCGAGTCG
ACACATTTATTTCCGGCGCCATCTGTCGAAACAAATTCAAATCTTTCCAAAACCAACGCC
TTTTATCACTGTAATGAATCGAAAGCAATCCAAAAACAGAGCGTCCAAAACAAAGCAAAT
GAAGCGAGCGATCGGGCGAGAAATGACTCGACTTCATTTCATTTCACGTGCAGGTGAGCG
ACCTGCTGAGCAGCCTGCGCGCGGAGTGGCCGACGCTGGCGTGCCCGGCGAGCGACGGGC
TCCAGTTCTGGGCGCACGAGTGGGAGAAGCACGGCACCTGCGCGCAGAACCTCTTCAACG
AGCACGGCTACTTCCAGACGGCGCTGCACCTCCGCGACCAGCTCCGCGTCCTCGACGCGC
TCGCCTCCGCCGGCGTCGCCCCCGACGGCGGCTACTACACGCTGAGCGCCGTCAAGGGCG
CCATCCAGCAGGGGACGGGGTTCGAGCCGTTCGTGGAGTGCAACCGCGACGAGTCCGGCA
ACAGCCAGCTCTACCAGCTCTACTTCTGCGTCGACGCCCGCGCCTCCGGCTTCGTCGAGT
GCCCCGTCCAGCCCGGCGGCAGGCCTTGCGGCGACCGGATCGAGTTCCCGGCCTTCTGAT
GCGCCGATTTCTGTTTTCCTCCTGATTTCTGTTTTCCTCCTGATTCATTCCCTGCGTTAT
TATTTAATATAGCAAAGTTTGAGGGGTCGTGATGTTAATGAAGACAGTGTATGTCATGAC
ATGGTGTAAACATGTGGAGGGAGCAGGTTGCTATTTATTATTCAGATAAACAAGAAGCAA
TACTCTACATTTTTTGGTCACATGCAGCCTCTAATTGCTTGATTGAGAGCCGACTAAGGC
CATGTTTGGAACCATAATAGATTATGATAATCTGAATTATGAATATAGATTACATAATCT
GGTTTATAAAAATAANNNAGGTGGGCATGTTTGGAGGCCAGATTAT