Contig Data
morexGenes
Links



Map Locations of contig_235170 (4977 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_235170

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33189 8 4533 bp AK354365 Available Available None





CDS Structure of MLOC_33189






Contig Sequence (4977 bp)

>contig_235170 4977 assembly3_WGSMorex_rbca.fasta
ATTTAGGAACGGAGGGAGTACTATTCGGATTATGACTGTAAGATTATTGCAGTTCCTGCC
ACAAGAATCCCCTGTTTTTCTCAGTAGTAAGTAGTTACTGGACACATTTCACCTTTTCCA
TAAATGGTAAAATTGAAAGTTGGTACTCCCTCCGTTCCTAAATNNAAGTCTTTTTAGATA
TTCCACTAGGAGACTACATACGGATGCGTATGTAGTCTCCTAGTGGAATATCTAAAAAGA
CTTNNNNTTAGGAACGGAGGGAGTACAACACTAGGCTTGTTGCATGTTGCTTGGAATTTG
GGTGGTCCTGTGCGACTTTCTTTATCAAAAGTGAGTGGTTTTTTTCTCGAAATCAAAGGA
AATACACTCATCTTTTGGGGAGATACGCTTTTACGTCGTAGCATGCGACACCACCACACA
ATTTGACCACTTTGCATCAGATGTGCATCTCTCTGCTCCTGGCCACGATGACATCGGGGC
TGATGTGGCAGTGATTACCGGCGTAGGGCGCTAGCTCGCACGCTTGTGCAATCCTCCTTG
TTTTGCATTCTCCTTTTTATATGTGGTTATTTTGTTCATGTGACCTGACTCCTACCATTT
TGAACAGGTAGTGTACTGATGAAGACAGAGATCGAGGAGGAAGTCACCAAAGGGTCCTGG
ACTGAGGAGGACAAATCCCTTTGTGCTTCTGTGCTGGGCTTAGATGCCTTCACATATCTG
ACAAAAGGTGGAGGCGCCATATCTGAAAATCTTGTAGCAGCGTCTGTGTTGGTGGGCTTG
CAAAATAAACTCCAGGACCTGGTTGAAGCTGATGGTCAAAGCCTTTGCTGGAACTACGCC
ATCTTCTGGCAACTCTCCCGCACCAGATCCGGTGAACTTGTCCTTGGCTGGGGTGACGGG
TCTTGCCGTGAACCCCATGATAATGAGATGAACTCGACTACTCGTGGCGATATTCATGAT
GCATCTTCACTGAGCCAACAAAGGATGCGTAAGCGAGTGTTGGAGCGACTGCATACAGCA
TTTGCTGGGGCTGATGAGGAGGATGATGCTCTCAGAATTGACCAGGTGACTGACACTGAG
TTATTCTTCCTAGCATCTATGTACTTTGCATTTCCACGACATGTAGGTGGCCCTGGGCAA
GTGTTTGCAACAGGTGCACCCCTTTGGATTCCTAACAATCCGCACAAGGTTTCCCCCTCG
AATTATTGCTATCGTGGATTCCTTGCAAGTGCAGCAGGATTTAGGACTATTGTGCTACTG
CCATTCGAAGCTGGTGTACTTGAATTAGGCTCAATGCAGAATGTGCTCGAGAGTGCTGAA
GCTCTGGAAACCATAAGGTCTGTGTTTCTAGGGGAAAGCAGGAAGAAGGCAGCATCTGGG
AAGCATGATGAGAATGGTTCTGCTCAAATATCACCCGGGTTGGCTAAGATTTTCGGGAAG
GATTTGAATCTGAGCCGACCTTTAGTCAACACAGGAGCAGTTCCATTAAAGATGAGCGAA
AGGCCATGGGATATGCAGAAGAATTGTGGTGGTGAGAGCCTGTTACTCCCCAATGTCCGG
AAAGGTTTGCAGAACTTCACATGGAGTCAGGCTCGAGGCCTGAATTCTCATCACCAGAAA
TTTGGCAATGGTATTCTAGTTGTGAAAAGTGAGACTTCACAACGTAGCAATGGGGCTGCA
CATAGCCCTGGAGTGAGCCCATTTCAGCTTCAGAATTCACAGCAGATACTGACACAGCCA
CCACCTCAGTCACAGACACCAAGGCATATAGATTTTAGTGTAGGGTCTAGTTCAAAATCT
GGTGTTTTGACTTCACAAGCAGCTCTGTTGGGTGGGGAGAATGGCAGTGTCGATGGCTTG
TGTAAGGACCAAGTGCCCCCTGCAATGGAGGGCCAGCAACCAAGAAAGAGGGGAAGAAAA
CCAGCAAATGGGAGAGTAGAGGCACTCAACCATGTTGAGGCTGAGCGCCAAAGGAGGGAA
AAACTCAACCAGAGGTTCTATGCACTGAGAGCTGTTGTTCCCAATATCTCAAAAATGGAC
AAAGCATCACTCCTGGGAGATGCCATAACGCACATCACTGATCTCCAGAAGAAGCTCAAA
GAGATGGAGTCAGAGAGAGACATGTTCTTGGAGTCTGGTATGCCAGACCGCATGGTCCGA
ACACCTAGGCCAGAAGTAGATATCCAGGTGGTGCAAGATGAGGTTCTTGTTCGTGTAATG
TCACCTATGGACAACTATCCAGTAAAGAATGTGTTCCAAGCTTTTGAAGAGGCAGAAGTC
AAAGTGGGCGAATCAAAGATCACATCCAACAATGGGACAGTTGTGCATTCCTTCGTTATC
AAGTCCCCTGGCTCTGAACAGCAAACAAGGGAGAAATTGATTGCCGCGATGTCTCGTGCT
ATGAGCTCCATGTAGAATTGATTGATAACTTAATGCATTAGATGTCAGATTGCTTTTCTG
GCTGTGAACAGGTAGCAATGGTAGGACTCCTCAGTGTCCATGTAATTGCTACATGACCAC
AGAAAGCTCAGATTCTGACTTTGCAGAATAATCTGTATGTGCAAATTACTGCCGTAAATC
TTTAACCGTCTATCCTGTGGTCAGTTCAGTTTTGATGTTTATTGGTTATAGTTACAATGT
ATTCTAGCTATTTATTATGAACCAAAATAAACGATACTTCAGCTCCACGGTGGAAGAGGG
AAAAAAACAATTTAGTTGAGAGGTTTCGGCATCCCAGTATGCTGAAGGTGATCGGGAGTT
GTGTGTTTTCTCAAGCAAAGTCATACAACTGTGCATTTTCCTTGTCTTGTTAAACCACCA
GGTATGGAGGTGACGCAAGCAGGACCCCTATGGGTTTGGCTGACTTTCACCTTCTGAATT
TTCTTTTCAACAAGTCCTAACCATATCCAACAAGACCTCCGGTTATGTTGAAAGCTGAAA
AACATCAGCTCATGTGGCTTGCCTTATCCAATTTGTACCCATCTTATGTTCACGCTTTCT
TCCATCGAGGCTTCAATAACACTACCAATTTGTGCATTTTGCTTGGTGAGCTGAGTCCTG
CCATTACTTGGAGTCAAGCAAGGTATTTTTATTTTCTATGCTTGAATGTTATATGTATCT
TAAATACCCATGGTGCAGGCTTGTGATGGTTAGCCAAAGCCATATTGGTGAGTGGCAAAA
TGCTTATGCAATTTCTTACTTTTATGTAGGTGGGCAAAACTGAATGTGTGGATTGATTAG
GTGCTAGAGGTGAGGTCTCATCACTTTGTTTGTTCTATTCACTTTGTTTGTTCTATTCAC
TTAAACAACCATGCAATAGTAGACATATGGATTATCAGCAACCAAGCACATCATTCTTCT
GGACTGGTGGAAAGTATTTATGTATGGTTTGCTTTATTTCTATTAGTATTAGTATATACG
GAGTATTAGAAGCCAGTATGCCTATAACTTTCACTAAACATACGAATTTGATTTTTGTAT
ATGTTGAACACAGATATGCCTTTGAGGCCAAGATCAAGCAATGAGATCCTCCCCTTTAAT
TACCAGTGTACGTAGGTGGTGCTGTCGTACTCTGTTCTTAGATTACAAGCAACCTAGTTT
GTATTTTAACCTTCATGTTTCATGCCACCATATCTCTACATGTGCATAAATTCCTATTGT
TTTATTACAAAAACGAGGGGTGGCAGCAGCCAAATGGAAATGATGTAAATTTCATTCTGC
ACTGATAGCTGCCATAGTGCCATGAAGTACTGTTCCACGTCATTCACAAGAGTCATAGCT
TTCCATCATTACTATCATAGTTTGTCCACTTCAACTTATGATTCTTGTAGTTTCCCTCAA
ATTCTCCCTTAAGGTTACTGCCATCCATTGATCGAGTGAAAGCTAGACGTTGCCCATATG
GATAACTGCTTGTATGGACAACTGTATACACGAAACTACAATGAGAATAATTCGTCCCAA
GTCAGTACGATATTACTAAAGGTGATCTGTGCGCCTTGCCGTGCCGCTTTTCATTGCGGG
CCACTCTTTTTTCCCCTGGTTTTGGTTGAAGTTGTTCCTGTTAGATTTAGCCATGATAGT
GGGAGTGGTTGGCGGCAATACTCATGTGTCATCATATGAAGCGAAATCAATGCTCCTACT
TATGACATTGACTGACAAAACTCTGAGAGCATGATATATTCTTTTATTCAAATAGAATTT
CTTTTTGAAACGTTCAAATAGAATATCAAACATGGGTTCTGTTTCTTGAATATTGCACTG
TAGTGTTCTCGGCAGAAAGGTTTTTTATTGCATTACAGTAGACAAAGGAAGAAACCCTTG
CCTGATCATCACCGGTGTCCAACAACAAATTAACTGTAGAAACAGAAGACATGATACAAA
CAAAGCAATAGTAAACCGACCAAGTTGGAATAGGGTGAGATACGTGCGGAATTATTCTTT
ATCTGCCACAACAAACAGATTTATATGAATAGGTAAAACCAACCTGGAAGGCTGCGCTTG
CCATAATACATTTATCTTCGATGAAGCTATAACAGGGATGAAAATCTTCTGGGCAGCACA
ATTGGAACATGGTTCCTGCCTGAGTACCACAATACTTACAGTATACCTGAGAGCTATGAT
GAACACAATTCTCAATGCTTACGACACTATGATAAAAACTACTTACAAAGTTCACCACCT
ATCAGCCCTGTAAGTAACTGAAGTGGAGGTTATTCACATTTTGCCTACAGCGCAAGAAAA
AAATGAAAGAAAATGCTAGTCATAGAGTGGTATGAACCTACAACCAAGACAGTTAACTGC
AAGTAAATTGAGAAAAAAAGAAGCAATCACGGTCAGTTCACCATTTCCATCTTCCCATGA
AGAATGGAAGTATGTACTAGTGTTAAGATTAGAAACCCTTCCAGACTCATCAAAATCTCT
TCACTTTCACTCCAGCTCTAGGTTTGAGAACAAAGTGTTCTTAAAAGTTAGCACTCG