| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_234251
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_33074 |
5 |
1679 bp |
MLOC_33074.2 |
Available |
Available |
LOC_Os04g42000.1, FRAME:+3, EVALUE:1e-31, 13104.m04132 protein 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_33074
Contig Sequence (4691 bp)
>contig_234251 4691 assembly3_WGSMorex_rbca.fasta
TGGAGTTGCGCAGAATAGATGACTCAAACTTGCTCCTTTTCCAGTCCACAATTCCAACTG
CCGGTATTCTCCCTCTTTAAATAAATCTTACAAAATAAGAAAGAAAAGACATAAGTATGG
TACCATAAAGTATAATAACAGTCNNNNNNNNNNNNNNNNNNAACATGAAAGCATGATGCA
AAAATGAACGTATCAACCAGCATGCTCTCCTCATCGTGCAATACACCTGTTTTCATCTGC
CATTAAGAAAGAAGGGTCCGACACTTAGGGTCCACATGCCGGTGAGAGTAGACTGTAATC
CCGGTCGGGATCGTCGCATTCCCAGTGTACCAAACATGTGTAGGATTCGATTTAGACCGG
GATTCGCGAGTTCACGGTGAAAACGACTCGGATTTCGAGTTCAGGGTTTAAATAGCCCAA
CCACCATGAATTTAAGGTTTAAAATAGACTCCCCCCCCCTATCCTATCTCTCACAACTCC
CCTCTCGACAGAACAAGCGGCGGCAGCGACGGCGATTGGATCGAGCGCTAGGACGGCGAT
TCCGACGCAACGGAGGTACAGACCCCCCCTTCTCCTCGTTCCCCTCTCTATCCTCTCTGT
TTTCTGCCTCCGGGAACGGATCGAGCCGACTGCAACGGAGGGATCCGGCCGCCGGGAACG
ACCAGATTCGCCGGGGGCTGGAGGGGGTGGGGGGTTTGGCACTGGGGAAGGAGAGGGCAG
TGTGGAACGGGAGGTTTGGTGAAGGAGAGGGCAGTTTGGTCGCCGGGAAGGAGAGGGCAC
TGGGGAAGGAGAGGGCAGTTTGGTCGCTGGTTTACCAGGGAAGCAGAGCGCCAGTGGGAG
GAACTCTCTGTTCTGTTCATTCTTTTGCAACATGTATGTTCTTTCCATATATGCGCCTGA
CGATCTATTCCTCTTGTTTATTTTCTGCAGCTTGGACGGGAGATAGTGGCCTAAGGGGAG
ACACTCTTTTGCATCCTATCTGTTTGGAACTCTTCTGAAGGTATAAACTAGTGTACATTC
TGCCATTAACATATACTTGCCGTCATGAACTGCTATGTCCTGCTGCCATGATCATGTATT
TTGTAGGCTATGATTTACTTAGACCTTAATTCCTTGTTTCTTTTCCACAAAATAGGATTG
TATCGGAGCTATTGATGGTACACATGTACGAGCCTCTGTAACAAAGGACATGGAGCCTTC
CTTTCGTGGTAGAAAGATCCCTACAACTCAAAATGTGATGGCAGCCGTTGATTCTGATCT
TCGGTTTACGTATGTATTGGCTGGTTGGGAGGGGTCAGCACACGATGCGCTAGTCTTACA
TGATGCGTTAACCCGTCCAAATGGTCTTCGTGTACCATAAGGTAACGAGAGTTAGCAACA
TTTTGTCAATGACACTATCGAATATAGCTAAGAGTAAACCGCTTGTTGCTCATATTGTAG
GAAAATTTTATCTAGCTGATGCTGGATATGGAGCCAAGCCAGGGTTCTTGCCCCCTTTTC
GTGGAGTGAGATACCATTTGAATGAGTGGGGGAACAATCCTCCTATAAATGAGAAGGAGT
TGTTTAATCTTTGGCATTCTTCTCTTCGCACGACCGTAGAACGTGGATTTGGGTAATCTT
ACCACCTCAAACAAATTGGTGAGTGCAACAATCATCCCCTCTTCAATCCTCTCAACCAAA
CACACAAATGGCTATCCCTAGTCACCTCTATCCTCCCTACCAAACAAAATAATGCGGTTA
TCCAACTCATCTAATCCCTTGTAACCAAACAACAAAAAATGGCTATCCCCAGCCACCTGG
TATCCTCACCCGTGAACCAAACGCCACCTTAGCCAGCTTTTGAAGGAATATTCCTAGGTA
TCTGTTTATCCCCACCCTACTTTACCATCAAACCAAACGAGTGGCATCTTTCCTAAAACT
GACTATCCCTATCCACTGGTTGGTTATCCCTCAAACCAAACACCACCTAAATAGCGGGCC
GGGACGAGGGTTCCTCTCTCATCCGCACGCTAACTCGTTGCACAAGAATTTCCTCCCACC
CCCACCGTCTCGCCGCCGCCGCCGCCAGATAAGAAAAGAAGAAAAAAAGAGAGAGAAGGA
CTCGTCGGGAGGGCTCGAGATCTGTGTCGGGAGAGGGGGGAATTCTTGAGATCGGAATCG
GATCAAGCGGGCGCGCTCGGGAAGGGGTTATTACCATACCAAATTTTCCCAGGAACCCGT
AAGTTTCTTCGGCCAACCCGGAATGTTTTCCGTCTCTTTGATTGTGCCGCGGTAGTCTGT
AGATTTCTGGCTTCTAGGTCTTGTTGTTGTGCGATGTAGTTGTGCTCTTTTGACCAGCTA
GTTTCTAGGAGAATTGATCTCTGGTAGTTGTAGTTTGCATCTGGATCTGGGATGTATTAT
CTTAGCTATGACTTGTAGATTGGTTGCTCCTAGTAGTTACTACTCCAATATACAAGATCT
ATCTACCAGAAATGCAACTACTGAATGTATGTGCACAGTGATCATTAAATAGTTAATATT
CAGTGATCATTATAATTAGATTATAATAGTTAATATTCAGTGATCATTTATATCTTGATA
ATATTAAATGCAACTACTCCAGTGTATTCTGGAGTTAATGCTCCTAGTAGTTAATATTCA
GTAGTTAGATTGTAGTATCTTTGCTATGACTTGCAGTTTGCACAGTGATCTGGGATGTAT
TATCTTAACTATAATCTAATAGTTAATATTCTAGAGTTCTATTTTTTATTCGCCTTACGG
TTCCAGAATTTTCTTAATCTAGAATTTTGTAATCTCGTTCCTCAGACTTCCAAATTTCGA
TTTGTATTTTTGGTTTCCCGTGAAATTCGACCAAAAGCACATTGCTTTTACCAAAACGCC
ACTCTGAAAAAGCACATTGCTTTTACCAAAATGCCACTCTGAAAAAGCACATTGCTTTTA
CCAAAATGCCACTCTGAAACGCACCTGACCTGCAGCTCTGCACAGGTGAAAAGGCAACAC
ATCTTTGACATCCCCACGACCGGACTTGAGCAGCAGCAGGCCGCAGCAGACAGATCTTCT
CGACACCCACCGACGGCTAAGCGGATATGGCGGCTTCACCGGCAACGTCGTCCGCGGCCG
CGGGGGCCTCCTCCTCCGCGTGGCTATCCAGCGCGCCTCTGCGTTCGCCCAGAGTCGCCG
CTGCCTCGTTCCCGTCGCCCAACTCCGGTACGCTCCTGCTCACCATCTCGACCGCCGCTC
TTTCGACGGCCTGCTGCTTCTGATTCCTGCCATTCGATTCGTGCAGTTCGTCCGGCCGCG
CTGGTCGTGGATGCTCGGGCCTCTCGGCTCTCCGTCGTGACCGCAGCCGCCGCAGGGCAC
CAGCGGCTGATGGGGTCGCTGACCAACAACGAGGGGCTCAGGTTCGGCGTGGTGAGTGAT
TGCTCCTCTGTGTCGCCACCTCTTGGCCAGCGAGCGACTTTACTTCAATAAGAGACAGTG
GTTAATGGCTTATGACTAGAAATAGAATCACTGGAGATAAAACTTGTACTGAACCTGTTA
ATGAAATCTTGGCCATGAACAAAACTTATAAGGAGACAACAACACTACCAGCATGATTAA
TAGAGGGAACCACCTGGCAAATAGAACCACTACCTTCCTGTTTTTCAACACCATTTACCT
TTCCATTGTCTAACTCTGGTTCTTTAATCGACGTGCAGGTTGTGGCACGGTTCAATGAGA
TAGTGACCAACTTGCTTCTGCAGGGGGCTCTAGAGGCATTCGAGCGATACTCCGTCAAAG
CAGAAAATATCACCGTGCGTATCTTTATTCACTTGTTTAAATCGAAGTTATTTTGGGCCA
TGTTGAAATGCAAACATATCTTGAACCTCATTAACAACCCATCATGTTTTTCGGTTCTTA
AAGAGGTGATGTTATAACCTAGCCCAAACAAAATCATCTCCCGGCTGCTCAGCAGTTTCT
TGCCATGTAAATATCAGAACTCATGGTCAATTTGCAAAAAAGAAGACGAAGGAAAACAAT
GTGCCTTTGGATTAATATTGTTTGGTTGCTTTCCTAACTGCTGTTGGGGCCAAAACACTT
GTTTCATGAACTATTGCCCATGAATCACCAATTCAGCATGCACCCACTCTTGTTGGATGA
CTTAACCACTTCAAGGAGAAACTATGTTGTTCCTGTTCTTTGGACAACATATATAATTTA
TGTATACGTGTTTGTGAACTACTTTGATCTTCCTTGATGAAAGTTTTACATGGGGGTTGT
ATAATTGTGTAGGGACACTAATATAACGAATTTTATCGCTCTAACAGAATCTTTGACATG
ACATATCTTTAAATGGGTTGTTTTCCATGTAAAGCCCCCCTCGCCCCCCCTCCACAAAAC
ATAGAAGGGGAACGTATACCCATCTCGTATTGTACAGTACAGGCCAGCATACGTATGAAA
TACGAGGTGGGTGTATGTACGGCCGCCTGTAGTGTACAAAAGTGTACAATACGAGATGGG
TATACGTTTCCCTTTTTACGTTTTGTGGAGGGGGGCTCTACCGAGGCAAAAGTGTTCTTA
GAAATCTTAGATATAAATAAATTTACACCAATATACATAGTGCATGATGCTTCATCTGCA
CACTGATTAAAAACAACCTTAATCCTAAATAAGTTATGCAACTATTTTTCCATGCATCAC
TCTAATTTTCA
