Contig Data
morexGenes
Links



Map Locations of contig_233670 (2968 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_233670

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_33003 2 1068 bp MLOC_33003.1 Available Available LOC_Os02g51140.1, FRAME:-1, EVALUE:1e-63, 13102.m05811 protein N-rich protein, putative, expressed





CDS Structure of MLOC_33003






Contig Sequence (2968 bp)

>contig_233670 2968 assembly3_WGSMorex_rbca.fasta
TCCACTATAAACCCGGCGTTCGATTTTTGCCCACGGCAAATGAAATGTTTTTCATGGTAA
ATTATGTTTGTTGAGGATGATAAGTTTAGTGGGAACAGCCGAGATTCATCACAAATGAAA
TAAGGACTCCGCTATAAACCCGGCGTTAGATTTTTGACCACGGCAAATGAAATGTTTTTA
TGTTTGCTGAGGATGACAAGTTTAGTGAAAACAACCGAGATTCATCACAAACGAAATAAG
GACTCCACTATAAATCTAACGCTAGATTTTTGACCAGGTGAAATGAAATGTTTTTCATGG
CATATATATTTGTTGAGGATGACAAGTTTAGTGGGAACAACCAAGATCCATCATAAATGA
AATTAGGACTTCACTATAAATCCGATGTTACATTTTTGACCAGGGCAAATGAAATGTTTT
TCATGACGTATATGTTTGCTGAGGATGACAGGTTTAGTGGGAACAATCAATTTATGTTTG
CCCGAGTCCTTTCCTTTTCGCAGCGTTGCTCGTTTGACATCCGTTGGCTTTACCCAGGGG
GGCACGCTAATGTAGAGTCCTTTCCTTTTCGCGGCGTTGCTCGTTTGACATCCTGTTTAG
ACATCAATGCTAATTTATTTATAAGAATAGATGCTTCATTAGACATCCCTCCTACAGAGA
TAAGCATCTACCCTTAAAAAACGATTTATTTTACTATAAGAGGTAAGCATCTGTGCATTG
CACAAGGCAGAACTACTCTAAACTGGGTATTTCGAAGATGTATAAACCGAATTTCTACGC
GCTACAAGCTACCGAGACTCATCGCAAACAAAACAGACCATACTTGCAAGACCACGACAG
CACTTGTCAGGAAAGTCACTTGTTTAACAGCAAACGACACGTTCCAGTACAACACTTGTT
GCAAACGACACGTTCCAGTACAACACTTGTTGCAAACAACATCCGAATCAAGGATCCGAC
AAACGACGACGCTAGCTACACCAACAGGCAATCATGCCGGCCGGGGACTGATTTGAGAGC
GAGCGCTGTAGCGATCATCTGTATGCTGGTGCGCCAGCAAAGGAGTAGAGGGCGGACACG
GGCACCCTTGAAACAGCAGGCCCCTGGAGATTTGCCGGGTAAGCAGCGGGCCTGGTCGCG
TAGGACGGGTCCTGAGGGGCTGTGTAAGCACCACGGTAGATCTCATCAGCGTAGTTGGGG
TGCGCGGCGACCTCCTGCTGCGGCACTCTGTAGTCTCTAGGAAGGAATGCATCACCTGGA
GCCCTGGGAGCAGAATTCAAGTTCAACAATGTCAGAATTCATCAAGCATCCGAGCATATG
CATATGTATATGATTAGATAACCATTAAATCAAAACATTTTTTGTTGTAATGCACGCTTT
ACACTTGTACAAGACCTCAATCATCAAGACATCATGATATAAAGACCTTAAAGCATGCTC
CGAGTTATTTTCACATATGTCAAAAACACCCTCAACTACATCTTCAAATGTTAGTACTTG
TCAATTTTGCATTTTGTTCCTAAATGTTTTAGTCTCTTCATAATTGTTGCCAAACAGCAA
CAATACACAAATTCTAGAATAGTGATGAAAAGGTTCTGACATGAGGGTAAACTTTTTCTG
AGTTCTAAAAGGAGAAAATTGAGGGCCATGAACAATGTAATGAAGCAACTGTCGGTTAGG
TCCCTAAATTGTAGGGGTGCAAATCCTTTCTTTCATGAGTCAGATAAGCTTTTGGAAAGA
ATGAACAAGTCTCCTAGACTCAACAGTTCTTTTCTTCTGAAATGAAATTCCAGATTCGCA
TAAAACAGCCTTTACTAGGGTAATTAGTACTCCTATATGAATCATAACAGTCTACAGCTA
TTAATCGTGTATTTTTTTAGAAAGAGGTGAATTGGTTAGCTATCTTAGACTCGGCACCAA
ACTAAACAATCCACAGAAACAGCCCATTGAACAAATAGTTTGTGGGAAGGAAATTCTGCA
TTCAGAGAGTAACAAAGTGCCCCACTAAAGGATTACAAAAGAATTACAACCTTCTAATGA
TTTCACAATTAAACATCAACAGACATAACTTATCAAACATACCTTCCATAAAATGGAAGG
TTATATGGAGAAAAGCTATATTTCACTGCTTATAATTCAATTAGGAAGCAGCCAACAGAT
TGTACTATTAAATTGACTGCCATGCTTGAAAATATATTTTCTGTTATAATAAATGAAATT
AGCACAGCACTCACCTTTCATAAATGATATTAGCTTGATGTGGATGGTATGAACCATGAG
GAGCAGGAGCAGCATTATAGTATGTAGGTGGCTGAACTTCTTCAACAAACTGTGGGCGTC
GAATTTCTTCAACATGGAGTGATGGCCTTCTTTGTTCATAATCATAGGCTAATCTCCTTT
CTTCAACAAATTGTGGGTGTTGCATTTCTTCATGATGTCGTGCCAGCCGCCTTTCTTCAT
AATCATATGGCTGTCGCCTTTCTTCAACATAGTGAGGCATGCGCCCTTCAACACGGTTTG
TCTGAGGAACTTCTTGAACATGTTGGGAAGATGGCCGATGTATGTTAATTGGCTTGTATA
GTGCTAGTAGCTTACGGACCTACAAAATAGAACCATAAATTACATCATGAACATGAAAAA
TGTTATTTTACTTTTATTTCAGTTTTGGATACATTTCAAATTACACAATTTAGAAGAATT
GTCATGGCTTACTTGTCTAGAATTGAGCTCTTGGGTGAATCTTCCCTTTGAATTGTAGTT
CTCCTTAATGGCATGCTTGAAACTACTCTCAGGAAGCGGAAGACAATCTTTATCAATCCT
GAATTTGACCTGCATCAAGTGCACAAATTAGTTAAAATAATAAAATATCCTTAGCATCTC
TCTCCTTTGACCTATCATTCATCTTCATGAAAGATGAAACAATGCTAAAAGAAGCTCCAT
GTTAGCTTTGCGAGGCTAAAACATCCCA