Map Locations of contig_233570 (11006 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_233570

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32987 1 505 bp MLOC_32987.1 Available Available None
MLOC_32990 3 1129 bp AK249309.1 Available Available None
MLOC_32989 1 203 bp MLOC_32989.1 Not available Available None
MLOC_32988 2 5522 bp MLOC_32988.1 Available Available LOC_Os02g47590.1, FRAME:+1, EVALUE:0.0, 13102.m05363 protein ornithine carbamoyltransferase, putative, expressed





CDS Structure of MLOC_32987






CDS Structure of MLOC_32990






CDS Structure of MLOC_32989






CDS Structure of MLOC_32988






Contig Sequence (11006 bp)

>contig_233570 11006 assembly3_WGSMorex_rbca.fasta
GCCAAGTGGAAATAGTGTGTGTGGTGCTCGTAAATAGAGAGCATTCTGGTAGAAAGGTAC
AGGAAAGAATAGGGAAACTTCTGTCATTTTCTTTGGTCTCTGAAAAATAAATGGTGATGT
GGGCTGATAGCCTCATACATTACTAAATTACATGATACAAACTCACTTCTCTTTTTTGAT
TTTTTGTTTACTTCGTTGTGCTACAATGGCTCTCCTAGGAATGTTCTTGCATGCTTTGAT
GTGCACAATCCAGAAAGTGCATGCATCCACAAACCAAATAGGATTTTGTGTGTGTTATCT
TCTTATAAATTTTGTGCTCGTCCAATAAGAATAAGGTTTGGTGGTATTATTTTTGTCTGT
CATCCGGTGAATTTCAGATTTCAAGCTAGTTGTAGTTATTTCAGGTTGTATGTGCAAATC
CTTGGTGTGACATGATTGGTAACTGACCATAAATACATTGCAGTCTGATGTCTAATTCTT
GATTTATGTGGTACCATGGTCTAAAAATTGGTCCTAAAGATACATGGTGTTTTTGTACAA
AATAGATACAGTTATTTTGGGACGGAGGGAGTATTAGATTATTTTATTTATTTTTAATTT
GGTTCTAAAGATATAGTTTCAGAGTGATCATTTTGCAACAGCCAAGCTTGCCGTTGTTAC
AAATAATTGTTCTGTTGTCCTTAATTCACTTTCTCGGTTTTTTTACTGCCACAAGCATTA
TTGTTCCATTTTTTTAGTTACTGATCATGCCATTTTTCTATCTGCCTTTGTAGCTGAAAG
ATTAGTGAGACTGACTAAATTCTGAACATGTTCCATGTGAGAGAAATAGCATGTTGATTT
CATCTTGAAATAATCATAGCTGGGGGTGAGGTTCGTAACTGAGGGTCATGTGGAGAGCTG
GAGGAAGAAGTTGCGAGGCTTGGAACTCTTCTTGTGATGGACTCAGGGACAACAGTGAGG
ACAATGCCTCTTTAGTTGTAATTGTGATACTACTAATGTGCAAGTAAACACTCCTATGAT
ACTCCTTATGCTAAAATGTTGGTTGTTAGTACAAAGGTGGTGACATTATTTGGTTCTCTG
GTATTGATTTCATGATTTGTGGTTAATACATGGTATAATACAATCCACATTGCATTATAT
TTCCAGTTACTCAATACTAACATTCTTTTTTAATTGGGCCTTCTTTGCGCCATTGGCGCA
ACCGGGTCATCTAGTTACCTCTAATGTCGAGTGGGCTCCATGCAGGACAGTGTCCTATGA
ACGAGGCGACGGATGCTCGCGTGCGATCCTATCCTAAGTCAAGCGTTTTCACTAAAATAT
ACGAGATCACATATAAAATGGACTAATTTTTCAGAACAAAATAATAAATACAAACCAATA
TGTGGTTGATATTTAAAAGGACAATGCTATTCCAAGCCCATCAATTTCAAGTCATAGACT
TGACAGAGAGGTTCTCACATCCTTCTACGAAGGCTATGCTCACAAAGGCGAGCTGTGAGT
GCGTAGGGATAATTGTACTGCATATGTATGAACGCGTGTCCGTATCGTGTTAAAAATACG
TAATAATTCTTCTAAAAAATGCGAAAGGGCAAGTGTAACGAATTCTCTACATACGCCCCT
CGCCGGATCCAGCTGGCCCGTCCATCCCGACCTTTCTCGAAGCCACGAGCCGCCGCACTC
AGGCCGCCGCCCTAGCCGCCGCGCCGTCCACCTCCGCCGGATTCCAGTGGCAACCAGCCT
CCGGTATCCCCTTTTTCCACCCTCCGTCGCCGACAGTCACTGAAGCATCTCCTTGCGATG
GCTGCAGCGGCGATTTCCGGCGGCCACCTCGTCCTCTCCACCCCTACCTCCACCCGGCGC
CCACAGTTGCTCCCCATCCATCCGCCTTCAGCGCGACCAATCGCCGCATCCTCCGCCTCC
GCGGCCCGCCGCGGGGTCGCGGCCGCCGCAGTGTCCAGCCCTGCCGCGGTCCCCTCCACG
GGGAAAGATGGTTAGGGTTTCTAAGCCTGCATTGAATTACTTTTGTTGATTATGGGACAC
ATTAACTAGGGTCCTGGTGGGGTTATTGTATTTGTTCGAAATTGATTTTGACAAACAGGA
AATGATCAGTTGTGACATGGTACCTGCCGTGAAACTTGAGTAGCTTCCAGGGCTCCCAAT
GTGGGCAGTTTCCAATCCTCTGCCAATGTCGATTCCTCAGGGACTAGTTAGCACAACCTC
TGTCCGGAATCAACTGTCGCTGAAATGAGTGTATCCACACACTGAAACGTGTCAAGATAC
ACCCATTTCAGCAACGGAGGGAGTAGTTGCTAGCAGCGCGCAAAGTTTGAAGTCTTAAAT
AGCTTTTGATATAAAATGAAGAGCCCCCTTATGATTGATCATCAGCTGTGTCAAAATTCT
GGTGATCATTTTTATATGACACTGGATGAGAAATTATTTGTAATGAGAATCCACGCAGAG
AGATCACACTATTCATATGGTGATCAAACAAGAAATGTACAGATTTTTCTGGTTGGACAC
TGCAAAACACAGACTGTGCTTTCCTTGTCCCCGTCATCACTGTTATGTTGTGCTCACCTA
CTTCGTTCCTCACCAGTGATCACCATTGAGCAATAGTTTTTCTTATGGTAAAGATGTTAG
CTCTGAAATTCACTGGTTTGCTCATTAGCTTTTATCTTTTTTTTTTCCTTCCTGAAAGCA
TGTGAGTGACGGAAACTTAGTGTACATTTCAAAAGTTTTGTGCATCAGAGTAAACTTTTA
TTACTGAAGATGTAACAAAATTTTGCTAACTTTATTGACAACACTACATTTTCTTGCAGG
CAAACAGGTTCCTAAGGATTTCCTCCATATCAATGATTTTGACAAAGATACAATCATGAA
GATTCTTAACCGAGCAATTGAGGTTAAGGCAATGATAAAATCAGGAGACAGGAGCTTCCA
ACCGTTCAAAGGAAAGTCGATGGCAATGGTCTTTGCCAAGCCGTCAATGAGGACCCGTGT
TTCATTTGAAACAGGATTCTTCTTGCTTGGTGGGCATGCCGTCTATTTAGGTCCTGATGA
TATCCAGATGGGCAAGCGTGAGGAGACCCGTGATGTTGCTCGTGTACTTTCTGGATATAA
TGACATCATTATGGCCAGGGTTTTTGCTCATCAGGTATGATCATTAGTTCTATGATTATG
ATTTGTAAAATTTCTATTGAGGTATGCCAGATTCTAAATAAAATTCCTGCATATTAAATC
TTCCTGTTCCACAACGTGTAACGATTGCAATCTAGACATAACTATAACTTCTTATTTCTT
TGGTGCTTAAGCAAAGTTAGATATCTACTCTGAAGCCATGAGCGGACAATAGAAGAAATA
TATATTTCGCAGGCTGAAACCTTTTAATATGAAGCATCAACCACGATAGAGTGTAGTTAT
AACTGAAAATGTAAGTTCTTTTCATTCTAGTTTGTGTAACCGCCAACCTGAAAATATTTG
GATGGGTGGATTTGATGATCAAACAATATTGGCGTGGTAGTTTTTTCTGTTGTGCTTCTT
CATTTATTTTTTACATGTCGTAATAAATTTAACATCTACACTAGTGTAACAAACACTCTT
ATATTATGGGACGGAGGGAGTAATAATTGATATTTGGATTGGCACTGAACTCACTTGCAT
ACAATCCTGCTTTGTTGGCTTGCTTGTTATTGAGATACTTAATCTTAAGTTATTTGTATT
CTGCTTTCATGCAATTGACCTTAAGAGTTAAGAATCACATTGTCTTTCTAACATCTCATA
TGATTTTTGCAGGATATTTTGGACTTGGCAAAATATGCACCTGTACCTGTCATAAATGGC
CTCACAGACTACAATCATCCGTGTCAGATAATGGCTGATGCGCTCACTATGATTGAACAC
ATCGGCCGTATTGAAAATACCAAGGTAGATCACCTTTAAAATGACAGCATATGGTGGTTT
TGTTCTGCGGGGACCAATTTTCTCTCTTTCCCTAATTATGTATGTAGGTTGTCTATGTTG
GAGATGGCAACAACATTGTGCACTCATGGCTTCTATTGGCTGCTGTGATTCCCTTCCACT
TTGTATGCGCCTGTCCTAAGGGCTTTGAGCCAGATGCCAAAACTGTGGAGATCGCTAGGA
GTGCTGGAAGTAAGATTGAAATAACAAATGATCCCAAGGAAGCAGTTAAGGGAGCAGATG
TTGTGTATACAGATGTTTGGGCCAGCATGGGCCAAAAGGAGGAAGCTGAATATAGGAAAC
AAGTATTCCAAGGATTCATGGTCAGTCTACCTCTTGTTTTATGGTTTACACAAATGTTGT
TCTGTGGACATGTCATTTCTACTGGATTGTTGATACCTTCTTGTTTTGCTGGCTAGATTC
TAGCTACATCTTCAAAATGTTCATATTCTGCTAGAAACCAACAAACTTGTTTCTTTTATG
TTTGATATTTAGAGTTTAACGAATTATACTAGAAGGTTGATGAAGCTTTGATATTCTGCT
AGAAACCAACAAGCTTGTTTTACTGGCTTTCACGTTTCTTTTATGTCATTCAATCATTCG
CAGTCAGTAGACTCGGCGCATGGGTTGGCCCTCAGCTCACACTTTTGTGATTCTTGGTTC
CTGCAGGTTGATGAAGCCCTGATGGAGATGGCTGGTCCAAAAGCCTTCCTGATGCACTGT
TTGCCTGCGGAGAGAGGGGTGGAGGTAACAGACGGTGCCATCGAGGCTCCCAACTCGATC
GTATTCCCCCAGGCAGAGAACAGAATGCACGCGCAAAACGCAATCATGCTTCACGTGCTC
GGAGCTTGATTACCCTCTGTTGTATGCTAGACTGCTTAGTGTCGCATCGTTATTGAAGTT
GAACATTATTACTGGATACTAGGTTCCTTCGGCATACTGTAAGCCTTGGAGTGTTTCCGT
GAAGGCGTGAGGGTAGAGATTTTGGAACATGTCAGATTACTCTGGGGTACTGTGTCAGGT
CTGGTCATCCTGAATAAATATGATACATGCATTTCCATGTTTTCCAACTCTTAACTCCTG
TTGGGATCTCCACCTCATCTTTCTAGCTGCTTGTTCTCTTAGATTCATCCTCTCCAATCA
CCTTGTTTGCACATGCAATTGAATCAGAGTTATAATCTGCCCGTTTAAAAAGGGTTGTAA
TCTGCTGCACAACTCCAGCAACTCAAGTTGCAGCTTGCTGAGCAGAAAAACATCGTTCAT
TCACCTGCCATTTGTTAGACAATATTGCATAAGCCCCACCCACAGTTATCTGTGGTTCAA
ATTGGCTCTATCAACTACTCCCTCTGTTCTAAAATAAGTCCCGTTGATCTAGTACAAACA
TTATACTAATTTAGTATTAAATCTATGATACTTATTTTGGGACGGAGGGAGTATATCAAA
CACACATGTTATCTGGTACTCCCTCCGTCTCAAAAATAACAACTTTATACTAGGGAGTAC
AAGACACACATGTTCAGCTCAGCTCCTACGGTAAGTAAAGAGCATTCTATTTCCCGCTTC
CATTTTCTTGCGCTAGTAGAGCCAGCATTCTATTTCCCGCTTCCATTTTCTTGCGCTAAT
AGAGCCCAAAGAGATTCATCCAAGGCCGTGGTATTGAGTAAAAGTTCCTTTCCTGGTATC
CAAGACCCTGGTATAGAGGACTGGAAGATTGAGGAGATAGATTTTGATGCCATCTAGGGC
TTGTTAGCAGTTTTCATCCCAAAAATAATGAGTTTTTTTTAACACTAGTCTTTCACTGCA
TTACAGGTGGCAATAACAATTGGGCAGGACATGTAAACTAATCAACATCTCAATAGAATA
TGCACAAACCCTTCTTGGAAGGACGCTATTCGCCACCTTAAAGATGATCCACAATCCAAG
ACACTACAATTCTAAGAAGGAAAGGAACTAGCAATGCTAAAGGGTGTGAGGGTAGATAGG
TTAGCACTAGGTTGTTGTTGCCCTCATTAACACCAACAGGCGATGGCGTCATGCAAAGGG
ATGCGGCTAAGAGAGATGGATAGAGAGAGAAAACATATGATCTACTTTTAAGGAATGGCT
ATTGCATTTATCAAACAAAATATGCTTCAAAAAGTTCAACGGCTCTGAACTCCTGTGACT
AAGACTACCCAGGAGTCCATGATAGTGAAAGGACGCTCACAGAAAGAAAGAAAAACTATC
TAGCAGTGACGCATATAACATGAAAAAACCACAGGGAAAGCGAAACCAGCGGATACCACA
CAACATCAAGATATCACACACAGACGGGCCTTGATGTAACGCTGATTTCCTATTAAGCAG
ACGCTCTGTTAAGAGACGGTTTGACAAAAAAGGTTCCAGCACGAGGTCAAATACTTGGAC
CTGACATGGCATATACGGAAGGAAAATGTACCCATGCTTGCCTCAGCATGGACAGAAGGT
GCATATATATATCCCCGACAGACTGATGGTTTTCGATCATCATGTTAACATAAATGTCTG
TCGTACTATTGATAAGCCGTAGGGCGGATCGCGTAGCATCTGCAGTCCACCAGCTGGAGA
TCACTTCCTTAAGCCCTCCATGATGTACGAACCGTAGAGGTCCCTGCCAAACAGCATTTT
AAGCGGTTCAGCGCAAGAATCAGTTCAGATAACAGTAAGCCATCCGCAAAAAAACACACT
ATAACAGTGCTCCATATGCTAGTAGAGTAAACAATGTTAGTACAAGTATGAAGCAGCAAC
ACTCACATTGAGTACTTGATTGCGTTGATGGCATCTTCTGCTGGGAGGAAATCATTCACT
GCAACCTCCTTATTTTCATTCTTCTTGTCTGTCAAGACAGCACAAGTTCAATGGTCAGAA
TCCAGTTAGTTCAGTTCATGATCTGGCACATACAATTTTTGGAATGGAAAGTGAAATTGA
TCATAGTTGAGGAATGTACAGTCTTCAAAGAAGCGACGGATCTCCTGTAGGCGATGCGGG
GGAAGTTCACTGATGTCTCTGAAGTGACGGTACTCAGGATCATCAGCACAGACAGCTATG
ATCTTGTCATCTTTCTCACCCTAGTGACATCAAATGATTAACTAATGTAAGAAGTCAGCA
GTCAGATGGAACCCACTTTGTAAATGGTACTATAACTCTTCATTTGTTTTTGCTGCCTTT
TTGACGTCTCGTGCATCAAGCTATCTTACAATTGTGCAGTGGAATACAAGCAAATAAGTT
ATTGTCCATACCGATATGAAACAAGGCATCTTCAATGTAATCAAGTGATGGAGGAAATCT
AACCTGGTCAATCATAGGCATAAGCCCAATAGCACGGGCACGCAGGAAGCAACCAGGGAC
AACTTGTTCCTGTCCAGGAGAAAGAGCAGTAGCATTAGGACAAAGCTTATATAAGGTACA
AATATTTGAGAACCGCATCCGTTAGATACCTGCATCAGGACAAGGACGTCCATCGGGTCA
TTGTCCTCACAGAGTGTGCGTGGAATGAAGCCATAGTTGTGTGGGTACACAACTGAGGAG
TAAAGAACACGATCAACCTGGAACAAACAAAACATTCAAGTTCTCTTTTATCAATGCAGA
ATAAAAGTAGTTGTAACATGCAACTATGCAAGTGCTCCACATTCATATGTGCTACTACTT
ACTGACCAACCTACAGTTAGTGGCACTTTATTAAGGCATGCCCTTTTGTCGGTAGTATTG
ACAGAACTCCTCAATTTGTACATGCAGTGTTAACCGATGATGTCTTTAATCTCTCTTTTA
CATTCTGAACATAACAGATGGATTCCAGTGACATTCTTTAGGATTCAACAGGATGCACAC
AAAGGCCAAATAATTCACTGCTAGCTGACCTTGATAAGACCAGTTGCTTTGTCCAACTCA
TACTTGACTTTGCTGCCTCTAGGAATCTCAACAACCTGGAAATGAAAGGAAAAAAGAAAA
AGCAACTCTGTGTAACTGCACAGAACTTAATAACACAGCAGATAAAGACCGGAAAAATAA
AAAAAGGAAATCCAGAAAAGAACAGCTTGTCTTAGCTGGTCTACACAATCTTTGAGTAAG
ATTTATGCATACAACAATGGCTTACTACGATGACTTGAGACATGCCTGAGCTAGTATATA
TAATGTGAAAGCCAAACTGGTAGCAGGAACTGCAAACTCTAGAATGGCCCATAGAGTTTC
AGTAAACCTGACACTATTTTTTCATGGAATTAATACAAGTCTGGATGTTTCAAAAGGGGG
ATTTCAAGACTTCAGAACAAGGTAGATCGATTTCAGCCCCTATGGCAAAATTTAAAACTA
AATGCAAGCATGAAGGTAAAGCTCCAATCTGATATTGATCAATTTGATCAGAACATCAAC
TATATCTAAAGCTAAACTATTTAAAAGATAAACTTACACAGTTGAAAACTGCAGGAGCTC
CTGGACCTGCATTTTCACAGAAAATATAGTAACTAGTAAGATATATTTGAACAGAAACAT
TTGCAGCATGGTACAAAATTTTACGCACGTTAAAGTTCTATATAACATAACTAAACAATA
AATCATACAAAATCATATCTTAGCAAAACTATCTTTAAAATTGTTCAACTGAGGATGCAC
AATACCTATCTCCAGGTCGTGCCATGGGTGAGCAGCAACATGCTTTTGAGACATGGAAGA
AAGGATGCGCTCATTGAGAGCAGCAGGGGGCATCCTTGATACCTGGTAGGTCTTCCCATC
AGCTTCTCCAGCCATGGCTATTTAATTAGAAAATATCATCAGTAAGTAACTAGATTCCCT
ATATCCATGACACTAACAATCAAACAAAAAAACTTGAATAAGGACATGTTAAGAGAGGCT
CCAAATATAGGGCAAGAAAACACTACAGAACTTCAAAATTCCATGCAACAAACTAAATTA
TACAGTAAACATTTTACTGTTGAAGCTAACAATGTCATCCTCTGCATATTAATCTGAATA
ATGCTCTACTGCATGTTGGGTGGTGAAAGCTATCTGATGGGCAAATAAATTTCAATCTAG
TGCTTGACCATCAAAGGAATCTCCAATGTATGAACTATGCAAAACGGAAAACCTGACCCT
GTATTCTCATGTTTTTGCATGAGTTGCCCAATCCTGACCATTAGCTCTTTCCACAGCAAT
ACTGACACCTAATAAGCACAGAAACTGTCGACAATACAAGTAGATTCAACTTTGACCATC
CCAAGAACCCATGTGTTGGCAACTTCCCCTAAACACAGTGCAGTTGTATTCAAGAATACA
CGATTTCCATGTTTCCTGAATATGTATCACTCTGGTCTCTATTGCCAGACAACTGACCAT
ATCACATACTAGCAGTAGCAGACAAATTATGCACTTATCCAATACAAATGACTACTACGA
CATCCATGACCTGGAGAACCAATTGAATACTCACGTCAGTGTCCTCCTGTTAGTGAAAAT
CATTCACATACAAAAATATATTTGTCGCAAAGAAAGACAGATCTTCTAAGTAACTTCCTT
GGCATTCAACAAACTGAAAGGCCAGAGGTCCCCAGTTAGGAGGGGTATCTCCAAAGCCAC
ACACCCACACGCAAAAGGCAAATGTAAAGTGCACACCCCTTCTCATAAGTAACTTACAAA
AGAACACTGGCAAGGCATACATAAACAATACTAGTAACAACTAGCATTAATTTAACAGAT
AGGCCCGAGCTGCAGTTAGAATAGGCTAATAATCTATGCCAGGACAGGACTGTAGTATAT
TAGTCAAAGTTAGCATGATCTTAGGAATCAAAACAAAACAAAATACTCCCTCCGTTCCAA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ATTTTGGGACGGAGGGAGTAAAATAAAATCTGAAGATGGCATCACGTCCTAAATAACTCA
ACATGTTAACCTGAATAATGTTCTACTGAATGTTGGGTGGTGAAAACTACATATGGACTA
TGCAACAACAGAAAACAGAAAACCTGACCCTGTATTCTCATGTTTTTTGCATGAGTTGCC
TAATCCTGACCATTAGCTCTTTCCACATCAATACTCACACATATATAAAAAGTAATTCAA
CTTTGTTCATCCCAATAACCCTCTGTGTTGGCAACTACCCCTGCACACCGCGCGGTTGCA
TTAAAGAATAAACAGTTTCCATGTTTCCTGAATACGTATCACTCTGGGCTCTGCATCCCA
ATAATCCTGAATAGTTGACCAAATAATATACTGGCAAACAAAATAAACGTATGCACTCAT
CATGTCATCCAATACAAATGACTACTGCAACAACCATGACTTGAAGGACCAACTGGGAGT
TCACGTTTGTGTCCTCCAGTCAGTGAAAACGATTCACATACAAACTGAAAATGGCCGCAA
AGGAAGACAGATCTAAGCAACATCATTGGCATTCAACAAATGAAAAGCCAGAGAAAATCC
CCAGTCGGCAAAGCCACACGCAAAAGGCTAATGTAAAGTGCGCAGCCCCTCTAACAAGTA
GTAGCATCCAAAGAATAGTAGCAATATACTATCAGTAAACAATATTAGCAAGTAACATTA
ATTTAACAGATAGACAGGGCCTAGGCTAATAATCTAAGCGAGGACTGCACAGGACTCTAG
TGTATTAGTCAAAGCTAGCACGATCTGCGGAAGCAAAATAAAATAAATCGGAAGATGACA
TCACGTCCTAAATACTAACTGAACATCAGCCGCGATTAAGAATCTTCCCCTGATTCCCTG
AAGAATAGCTATCACATGGTCCAACTCGTGTTCTCTTCTCTAGAAATAGCAACGGAATCA
TCCAGGAGCATTGGCGAGACAGGGCATAAATGCGGGTAAAAGTAACTTTATCTAAAGAGG
GGAAACCGCCACGAACAGATTTGGAGAGCTGCGACGAGTTCGTGGAAACGACGAATGCTG
CTACAGGTCTGGCAAAGTCGAGGAAAGAGAAGTTGCTCAAAAAGGACGAGAAGGAACACC
ACCGAAGGAGGGGGGGGGGGGGGGGG