Map Locations of contig_232593 (6530 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_232593

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32870 1 525 bp AK363421 Available Available None





CDS Structure of MLOC_32870






Contig Sequence (6530 bp)

>contig_232593 6530 assembly3_WGSMorex_rbca.fasta
CCCCGCCGCCCGCATCCGCAAGTGTAAGTCCATCCCACCCCCAGATCCCGCGGTTGCTCT
GCTCACATGCGATCCCGCTTCCTCAAGATAGTTGTTATAGGCATGAAGTGTGTGCGAGAG
ACCGTGATTGCTTAGGTTGTCGATTCAGTTGTGGTAGCCCGGTCGCTCTTGCCTTGAATC
TCGTGCTAGCTAGCTCTGTGGCTATACGTGGTACGCCTGCGGCTTGATGTGCCATGGTCT
TTATCTGAACCTTGGTTGTGAGTAGTTCTTGTTTGATGGTAAGCATGATGGGTTGAAAAT
GTTGGGAATGGCTGTAATATGAGATTGTTGATGCAAGACCAACTGTGAAAATGAATTGAC
ACATGTCTTGCATGCTATGCTCTGTTACAACTTGATAGAGGTTCAGCAACTGGAGCTATT
GATAAGGTGAATGACTTTGCTGTTTGTTCACATGTATTGTTGATCACAAATTTTAAGATG
TTCGTCCTGTCCTAAGCAGTACACATTTGTAGCCAGCCTATCCTTGTGAAATTTTAGTTA
GTGCAAGGCAGTTAGGATTAGTTGTCAGGTTGTTCTTGCTGTCTTTGTATATTTAATTTA
AAGCACATCTTACATTTGGTAAGTGTTATGTTCTCTACTTCATCTGATGAGAGATTCTGT
GTTGTAAACAGACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACCGGCACCGGGAG
GATGAGGTACATGCGCCATGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGTATACT
TCCTTGTTCTCTTCTTGAGTCTTGTTATAAAATCTGCCAGCAGTTCCATCACACATTATG
AGCTTTGTCTTGTGCTAATCTACAATCCTGTTTATGTGTTGTGCAGGAACCGAGGCCGCA
CCAAGGAGCAAGGGAGCCTCTTCCAGCGGTAACTAGGCGTGACAGTCTTGACTTGTTACG
CGAGGCTGAGCCCTGATCATCAAAATTAGCTTTTTTGTTGCTTTCTACTGGAACTCTATG
TTTCTATGTCGAGAGGCAGACGGTATGATGCCTGGTTATGTTATTTGCGCAATTTTCGTG
GACGTTAATCCTTCAGTTTTGAATGTTGAATTGTGTCGGATGTCCTGTGTTCAGCAGCGT
GCTATTTCTTACATGGCTTTTTGTTGTTTCCATATGAAGATCTTTTCCTAAGCTGTGATG
CATGGAATAGTTTTACTCTGCACTTTGTAGTTTCCATAGAGCCTTCCATGTTCCTTCTCC
ATCAGGAGATGAGGTCTGAATTTGCGAGTTGATTTTTTTTATCCGTTGCCCTTCTATAAG
TCGACCTGACAGTAAACGATCTAGACTTCTCCCATGCCCACCCCCAGAAAATCTGGGAAT
ACATTTCTTGGTCGTGCCATTCTCAAAATTGAGTCTCCTACTGCCATAATTCACCAAGGA
GATGAAAAACTAATTCTCTTCAATAGCCTCCATGCCTGCTTTGCCAACATGGCATAATTA
AAAGTCTCCAGGTCTCTGAATCCTATCCGACCTCTATCCAAGTTTATCCCATGACCGCCA
ATGATCCCGCCCACCAGTACTTGGAGATTACTGTCATGACTTTTCTGCTCACCTCCTTTG
TGAGCTTGAAGCAACTCATAGCGTAGGTTGGTAAATTGCATGATAAAAGGTGACGCAAGG
CCTGTTTAGTTAGCTCGATAGTTCGTTTTCACGGGAAATAAAAGCTTAATTGAACTGTCA
GACGGATAAGTGGGCTTAAACTTGGCGCTGATTACATCCATTCTCCGTATCATTTCGAAT
TCCACAACCAGCATGACAGATATATTGTATGGAAGGCCAATTCAGAAAAAAATTGAATTC
CCCAATCAGCATGGCAGAGATATTGTGTGGAAGATCAATTCAGAAAAGGGATCGAGGGTG
CATCATGCAATTCTATATGGATTGGTACTTTATAAGCAAGAACGAAACATTTCTGGTACT
TCTGAACCCTGATTGTGTTACGCTGTTTCTGTTGTTAACTCAAAAAATTATACTCTCTCT
GTCCAGAAATACTTTCATAAGAATGGATGTATCTAGACATCCATTTTTATTCATTTGTGC
GACAAGTAATTCCGAACGAAGGAAGTACATTGCAATTTATGCGACAAGTAATTCCGGACG
AAGGAAGTAAATGCCGTGCTCTTTATGAAACTTTGTGTAATGTGAGAATTGTTGCATTCT
TTTTTTTTACATTTTTTCTAGAATATGCACGAGCCTGCATATCATACTTTATAGAAGAAA
TGGGGTGAAGTGCCATTCCACAAAGTTTACATCATTACAAGGCTTAGTAGAGCCTCACGT
CACTCATGCTATACTGCAATAAAAAAAACTACTGCCACTAGTCCGTCTATATAATCCGTT
GAAAAAGAACTCTAGGTCATCGTTGAGCAGTCCCGACGACTTCCATGCACGACCTTCACG
ATTAATGTTGCGTAGTGCATTTTGAAGTGATGATATTTCGCCGTAAAAAACAATTGCATT
GTGATCCTTTCATAGTTCTCATAAACATAAAGTGATGATTGCCTTGAGGTCTTTCGGTGT
GCAATGGGTCCCCACCCGTATGGAGCACCATTCCACCAAGTCGTCTTCCCTCGCTGGCGC
GTGTTTAGGAGCCCCCATGGCAGTCCAAACCCAGAGCCATTGTGTACGCGCAAAAGCGCA
CGTTAGTAGTATGTGGTTTATGGTCTCCGCGTGCTGGTTGCAGAAGGGGCATGTGGCCTG
GTGAGGTAGTCCTCGACGTGCCAAGCGGTCCGAGGTCCAGCAACGGTTTTGCATTGCTAG
CCACGCGAAGAAGCGGCATTGTAGGGGTGCCTTTTGTTTCCATACAAAATCTGCATATGT
CGCCACTTCTCGCCCCATAAACTTTGTCGCATATGCCGATCGGATCGAGTAGTTACCATT
TGCCTCTGAGGCCCAACGGATGACGTCTTCCCTCTCCTCATACAACTCCAACTCAGCCAC
TCTCTCCCGTAGCATCAGTTATTCTTCAATGTTTTGTAGCCCAAGGATAGGTCCAACATC
CCTCGCCCAATTGTTGTCCTCAAGGGCTTGTCACACTGTTTGTGAGGCCCTCTTTGTTGG
GGCGTCTTGAACCCGGTTGCCATGAAGCCATCTTTCTTCCCAGAATAGTATTGTGTCACC
CATTCCGATGGTTGCCATTGTTGCTGCGTGGAAAATTGCTCGTGCTTCACTCGTGACCTT
TATGTCAAACTCCGCCCATGGCCTATCTACATCCATATGTCGCAGCCAAAGGCAACGTGC
TTGGAGCGCGGCGTTCAACCAATGCAGGTTTGGAATGCCAAGACCACCAGCCTAGCGTGG
TGTACAAACCTGCTCCCTAGCCACTAAGGAGTTACCACCATGGGCCTCCCGCTTTGCGCT
CCATAGGAAGCCATGACAGATTTTCTCCAAGGCCAATAATGTCTTCGGTGGTAGCTCAAG
GGCCATAAGAGCATGTATTGGGATGGCACAAAGAACCGATTGGACCAATACAGTCTGCCA
CTTTTGGGTAGTGAGGTCCCTCTCCATGTTGGTAACTTATTTGCTAGTTGATCCACAAGA
TATTGAAATTGAGCTGCAGTCAACTTCGTGATGCTCAGTGGAAGCCCAAGATATTTGCAC
GGGAAGGAGCTGATCCCGCATCCGAGGATCACCTTTGTTATTTCTCTATGATCTAATGAG
CAATGCATTTGCATCGCCGTACTCTTCCGGAAATTTACCCGCAATCCGGAGGCCTTTCCG
AAGGTCTCCAGGATTTCACCACAACAGCGAAGTTCCACCTCTCTGGGCTTCAAGAATATC
ATCACACCATCCGCATATATCGAGAGTAGTTGGTGCAAACCTCTCGGCACCAGGGGCTCT
AACAAGCCAATTGATGCCACCCTCGAGAATATCCTGTGAAGCACCTCCATGATAAGGATG
AAGATCATGGGCGACATAGGATCCCCTTGCCGCATTCCTTGCCTTAGGGAGATGGACATG
CCCGGAACACCATTAATCAAGACTCTGGTTGAAGAGATAGCTAGAAGTCCGCATATCCAT
CCTATCCACTTGGAGGTAAAGCCCATAGCCGAAAGCACCTCAATAAAAAAAGGCCATTGA
ACTGTGTCAAAAGATTTGAAAACGTCCAACTTGAGCATGATTGTCGGAATCTTCAGAGCA
TCCAAACGTCTAGCCGTGCCCTGTACCATCATGAAATTATCATGAATGGATCGTCCATGC
ATGGAAGCACTCTGATGAATCCCAACCAACTGATGCAGTTCATCCATGAGGCGGAGCGAC
AAAATCTTGGCAAAAATCGTGACGCGCCATGGACAAGGCTCACAAGCCGGTAGTGCCTTA
TATCAATTGCTCCATCTATCTTGAGAATGAGTGTGAGCAGGGCCTTATTATGTTGTGCAT
ACCTCTCATATCTCCACGGTGAAAAGCGTTTAGTGCACGCATGAAATCCTCCCGGATAAT
CTTGGAGCAAGCGTAGTAGAAGCGTCCCATGAATCCATCGGTTCCGGGTGCTTTGTCTAG
GGGCATGGATTTGATCACCTTTAGCACCTCCTCCACCATGAAAAGCGTGTCCAGGTGAGG
CATGTCCCTCACTGGGAGCCCCAACTCTGTGAGATCCAATATTTATTCCCACACCGGTGT
ATTTCCGAGAACTTCCATGTAGTAGGTATCAGCCGTTGTTGCAATTTCATCCTGTCCTGA
TAGTATTCGTTTTCTCCGCATTTCAGGGTAGTGATCATGTTCCTCCTCCTCCGATGGAAG
GCATGCAGGTGGAAAAATTGTGTGTTATCATCCCCGGCTCTTAACATAGCATCCTCGATC
TTTGTCGAGCGATTGATCTCTCAAAGTGACGAGAGGCCCAACAACTTCTTCTTGAGTAGC
CGACGTAGTGTCACCTCGGTAGGGGAGAGGTTTCTAGATTCCGCCGCTACATCCAGGCAT
TGGATCAGTTCTAATGCCAGACTAATCTATAGTTTGTTGTTCCCAATCCACTTGTCACTC
CACTGTAGTAGTTTCTTGGTTGTTGCGTGTAGTTTTGCGTCAAGGACTGCATACAGGTTA
CCAACCGCCGGAATGGAGGCCCACACTACCGCGACCACATCTTAGAAGTCCTCTTTCTTT
GTCCAGAAAGCCTCAAACTTGAATCTTTTCCCTGTCTGGAACTCCGCATTGAGATCAAGA
ATAAGGGGGCAGTGGTCCGACACCGGCGTGCCCAAAGCCGAGAGGAAACTAGAAGGGTAG
CTTTCCTCCAAGAAATAGTCGCAAAAACATGGTCAATATTCTCGTGGGTGGCATTCTTCC
CTTGACCAAGTGTATCTCCACCCGTTGAGGTACAATTCTTTGAGTTCAAGTTGGTTTAGT
TTTGCTTGAAATTTAGAGATCATTCGTTGATTGACTGTACAATTGTTCTTGTCGTCTCGG
TTCACCAAAAGGTTGAAATCCCCCAGAACAACCCATGGGACATCATGCAGGTCCCGAACG
TCACCAAGCTCGTGCATGAACTCAATCTTATCCGTGTCAACGTGTGGGCCATAGACCCCT
ATGACCCACCATTGTGGGTCCTCGCCCGACTGGACTAGGGTCATGACTGTATTCATGGTG
TAGTGAGGGTTCGATAGTCTGACCAGCGCCACATCCCAAGCTAAGATGATACCACCACGC
GTCCCCACTGCAGGTAAATAGAAGAATTTTCCGAATTTGTTACCCAGACACTATTTTACA
AAGGCATCCGATATCATCTCCACTTTTGTTTCCTGCAAACAAATGATTGCCGGGTTCGCC
GCCATGACCACCTGCAAACCGCATTGCGTCTAGCAGGAGCGTTTAAACAACGAACATTCA
ACACCAAGAACTTTATCGATTGAGCAGCCATAAGTGAAGCTCACCTGTCTAGCCATCCAC
ATGTGTGGCTCATGTTGCGCCACACAACTCATCTGCGACATCCAGGAGCGTGATCACAAA
TGGTTCCCATCCAAACAGTCCCAGCAGAGCAACAATGTGCGCGTCACAGAGTGGCTTGGC
GAAGAGTTGAACATAAGCTTGCAGAGTTGATTCTTCAATTCGCTCCGCTTTGTTAGACAA
AGAGAGCTTCCTCATGATGACCCCTTGCTGCTTAGAGGCTATGTTTTATCCTTTGTGTTT
AGCGATTCTAACGCTCCGCCTTGGTGATCCCACCATTTGGTAGTGCTTCTTCGGCGGCCC
GATCCCCGTTTCGTCTTGGCAGTTGGGGGCTGCAGGAGGAGTGGTGCGAGGCTTGTCCTT
ATCACAACAATACTGCCTCTCCTCTCTGGGGTCCCAGCCCCATCCTCATGTGCAGATGGG
AAGAAGAGTGCGTGGCTCGGGGTGGGTTGGGTCGGCGTGAGGTGTGCATGGAGAGCATGG
AGTGCATGGGCACGTCCCGTCCCCGCCATCCTACACGTTGTCATCTTCCGCAGAAGCGGG
CAGGATGACCTGGAAAGTCTCCCAAGGTGCTGATAACCCACAAGTGTAGG