Contig Data
morexGenes
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Map Locations of contig_231639 (4210 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_231639

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32747 2 2702 bp MLOC_32747.1 Available Available LOC_Os07g45250.1, FRAME:+1, EVALUE:0.0, 13107.m04766 protein transposon protein, putative, unclassified





CDS Structure of MLOC_32747






Contig Sequence (4210 bp)

>contig_231639 4210 assembly3_WGSMorex_rbca.fasta
CGAACAAGGGGTTCATCTATTTTGATCTTGACCCGAGCCCTTACATAATTCCCTTCAAAG
AATCTGTTAGGGTTCATCTCCACGCTCTTCACCTGTCCAATACGCCGAGCAAGTTGGTCT
AATATCCCTTCCCTCCGATACAATTCATGAGTATCATGTATTTGTGCCCACACCTGCACC
CGATTCAGATCAACATTATGCGGTTTGCCCTTGCCATCATATTCCTCTATCACCACCATT
AAACCCCTAAAGATCCAGGGTCCTTGGTGCATCACCCTGTTCCAATCCCCAACACAGAAC
ATCTGGATAATGAAGAGATTATCATCCGCCTATCGTATCCCCGGATCATAAGCCAGACGC
CACACGAATCTCATCGTGGTTTTGAAAGACTCACCGCTCAAGGGTTTGGTCGTATGCACT
TTGGCCACCGCGAGCCATCGTGTTTCCTCGGTGAACCTCGAGATTTCTTCTTCATCCACC
ATCACCGCATCCAGCTCCGCCTCTTTAAGCTTCATATTCCTCATGGCTGCCTCCAGATCA
GCCAACGCTTTCCCCTTGCTACTCCCCTGACGGGGGGCACCCGACGATGATGCCATTACC
AGGGAGGGAGTCTCGCAGGAAGGATCCGTGCGAGGGAAGTATCCAAAACCTCAACGGCGG
TGGTGATCCGCCGGAGTAGGGAACCCTAAACCCTAGTCGCCGCTAGGGTTACAGCTTGCC
ATTGCTACAGTGAGGCCCCGGTACCTGGCCAATAGACCCACAATTGGCCTAGTATCGCAG
ATGGATAACACAACAGCAAAACGTCGGCGTGCTGCACGGGGGCCTTGAGGAAATGCAGAG
CCCAAGCAAAAATAAGCCTAGAGCCAGCGGCCCATCTTGAACTAGGCTCTCCACCAGAAA
ATGAGAAAAATGAGAAAATGGAGGGAAGGGTGGACAAATGGAGGGAAAGCTCTTCCGTTG
TGGGAAAAAAAAAAGGTTGGAGGGAAAGCTCGAAACCACCGCCGATACTCCCGACGGTAG
CCCTGCTCGGACGAAGCCGTCCATGGAGGCGGCGGCGGAACCCTACGCCTCCGACTCTTC
CGCCCCCCCTATCGGCGCCGACGGCTCCGCCTCCAACCCGGTACCATCTCCTCGCCGCAC
TCCGCCTCGGCGTACCACTCGATCCATTCCCCGCCGCCCCTTTGGTTGAAGTTTGTGTGT
TCTGAGCTCGCAGGGTGCCGCCGCCGGCGCGAGGAAGCGGAAGGCCCCGGCAGCCACTGC
GAGGAAGCCTCGGAAGCAACAGGTTTGTACTGTATCGCACTGTACTGTACTGTACTTCTG
TCCCAATAAGTCGATGACCTGCCACCGCAATCTTGCTGGCTTGTTTGATTCGTCTGAAGC
TGTTGCATCTCTGTCGTGGCATTGTTTGGTGTAGGCTCAAGAACCTATCCAGATCTCTGT
ATACTACGGACGAACAGAAAAGTTCGGTTGCGTGAAAGGCGATGATTTGGTTGATTGTTC
ATATCTTCCTCAGGGAGGGAAAGATTGTGCACACGTAGTTGGCCAACTACCGCTGCAGCC
GCAGTCGATGTCATTGGTGGATCTGCAGCTCTGGATCTTCAAGCTGTTCCGGCTCCATCC
AGAAACCCAAGACCTCGCCATTAAGGGGTTCCTCAAACAACTCACACCTGACATGTGCGA
TGAGCGCGAACCAGAATGGTATATGGACTACCGCCCCTGGGAGACCCGTCACTTTCTAAC
TGACAAGTGCTGGAGTGCCTTTGCCAATAAATTTAAGAGAAGGCGAAATGTGATGCAAAA
GTTCATGTTGTATGTGGAATCCTCTGAGATTAAGCACTATGCTGTTTTGCTCAAAGCCAC
ACATGATCATTATTCTCAACTGCCGACAGTTGTGTTCCCTGGGACGAAATCCCTGACAAC
TTCTTACTTCCGCTTCCTCCGTCTCGTGGAAGACCTGTCAATGACACCTAAGCAAATTAT
GGCTTATCTCGCTAAACACTATGGCGAGCAGATGAGCCCCCCTGAGGCGTGGAGGGCAAG
ACAGACGGCTCTGGAACGGGAGTTTGGTACATTTTATGATTCACACAACTTTGCCCCGAG
GTTACTTAAGGATATAACATGTAAAACCCCTTGGGGTTTTGTAGACATCAAGGATGCAGA
GGTTGCAGGATGCAACAACTTTCGAGTCCTCCACCGTATATTTTGGGCCTTTGGGCAGTG
CGTGCAGGCCTTCAATCATTGTCGCCCTGTGCTATGCGTTAAAGGCACACCACTATGCGG
GAAATATCAAGAGGTGTTGTTGACTGCTGTAGCGTTAGATGCTAATGGTTACTCCATTCC
AGTAGCATTTGCTGTCGTTGAGGCGGAGACCAAGGAAAGCTGGATGTGGTTTCTTAGAAA
TTTGGAGCAAGCAGTGAGGCATCCATCGGATGTTTGCATTATACACGACTACAAAAGAGA
GTTGATCGATGCTATAAAGGACTTTCTAAGTTCCGATCAACGGCAATGGCAGAAAGTAGA
AAGCCGGTGGTGCATGGAACACCTTGCCGAAAACTTCTTTGCATATTTTGGCAACAAGAA
GCTGGTGATGATGTTCAAGAAACTTTGTCAACAGAGGCGACTAAATAAGTTTATTAAAAT
CTGGAAGGAGCTTGATGAGTTGACAACAAAATATACGGCAGACAGAGAAGGTAGTACCAC
TGGGGAAATGCAGCAAGAGTCAGTCGAGCATGATGAGGCAGACCTGGAGGCACAAAGCCC
ATCCAACCGACCTGATTCAGTGGACTCCAAGGAGGAAGGAGATCATGCCAATGAAAACGA
AGGAAAGATAGCAAAGTTTTCTGACTGGGTCCGTCCGAAACCAATGGAGAAATGGTCACT
GGTGCATGACACGAAGGGAGCTAGGTACGGCATCATGGGCGCTGATATATCAGATATATA
CAAGAAAGACCCTGTATTGAAAGGGATCACATGCCTTCCGCTCAGTGCGATAGTGGAGGT
GACATTTCTGCGCTTGGTAGAGCACTTCAAAAACACAAGTGCTGCAGCAAATGAAGCAAT
TGGCAACCCATCAATGAACTTCCCTGAACGGGTCCAGGGTGACATGAATTCAAAAATGCA
GAAATCCAAGATGCATCGTGTGATTTGTCTAGACACCAAAACCAGAAATGTTTTCCAGGG
GAAAGAGTTTCGGAATTTTACAGTTCAATCGAGGCAGAAGAAAGAGGTTGTTCACCTGAA
ATCGGAAAGCATAAGTAAGTTTGGTGAATCCACAATACATGAAAGTGCCACCTGTTCATG
CAACAAACCACAGTTGCTTCACAAGCCCTGCACTCATGTCATCGCCGTCTGTTGTCAGAT
TGGGGTGAGCACTGCTAAATACATGTCTCCATACTACAGCCTGGCCTACCTAGGTAGGAT
CTGGAGTGGAAATTTTGATGAATATAAGATCTCACGCAGTTACAGAAATATCACACCATT
TGAATGCAATACAACAACTTGGATCCCAGACAAAAGATTGGAGCGTGGTCTTCCTGTTTT
TGTAACATCGGACTGCCTAGAAACTGCTGCGGATGAGTCAGAGCAACAACGCAATGCTGG
AAATGGATCAACTGAAGACAATCAAGGAGCGGCTACACGCACTGAAGAACCTAATGAGAT
TTAAGCTTCTGTTATCACCTATCAAGCTATTAATGTTCTGGGCCCTAAATATGCAGTAGT
CACTGTCGAGCTTATCCTATGTAAACTTTGAACCTCTGGTATTATTTGCAGCGCATGAAA
ACTGAATTTTAGGCATGTTAAGACAATATGGTTACTATGCCCATGGGAGGCTGCAAAATC
AACCCCTCTATTAAATTTTTCCAGTAGGTTACACCCTTACAGTTGATAATTTTGTTGGAA
CTCTTGCATGCTCGAATGCCAAATCATTCTAGAAGACATCATTTTTTTTCTTCGAGAAAA
CGCAGAGAGATTCATGCGTTTCTTTGTATTGAAAAGGTAGAGTTTATGTTACATTCCTCC
TAGGAGGTACAGTACAGATGATGATTACATGGAATTAGTGCACGTCCCAGGTCTGGTGGA
TGATGTCGTGGAGGCCAGCCTCTCCCACCTTGGTCCAGAGGGACGCCTCTTCTTTGATCC
TCGCAACCAGGTCGTTCGCCGAGGGTTGGGTGCCCTCGAACACACAGCTGTTGCGGTGCT
TCCATATCAT