Contig Data
morexGenes
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Map Locations of contig_230478 (5636 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_230478

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32632 1 479 bp MLOC_32632.1 Available Available None
MLOC_32634 5 1954 bp AK252806.1 Not available Available None
MLOC_32633 2 957 bp AK252806.1 Available Available None





CDS Structure of MLOC_32632






CDS Structure of MLOC_32634






CDS Structure of MLOC_32633






Contig Sequence (5636 bp)

>contig_230478 5636 assembly3_WGSMorex_rbca.fasta
AGCGGCGGCTCCGGAGGGTGGGTCGCACGGTTAGCTCTCCGGCGGGCGCCATGTCGGCGG
TGGTGGCTTCCTTCTTGGCTCGTGCGGGCGAGAGGGGTAGCAGTTGGTGGCTCGGGCGCG
TCCTATGCTGAACGTCGCCCAGATCTGGATCTATGGTATGGACATGTCACGTCTGCCCTA
GGGCCACAGTGACTTTGGATGGGGTGCCGAGCGAAAGCTCCGCGCTTTTGCGCCGGCGAC
GCTTGCGGGCGCCGTTCTCTTCTTGAAGACGTCGTTGTGGATCTCCTCTCCGCGTCAGGG
TTTCGGGTGAAGACCCTTGCCCGGTGGGGCTAGGCAGCGACGACGCTCTGCGCCGTTCTC
CCTCTTGGGGGCGTTGCCTAGGAGCTTAGGGGTCCTAGGGTGTTTCGTGATTGTGCTTCA
TTCTTCCTGTATTCTCCTTCGATAGCGTTGTTGTTCTGCTTCGCGGTCCGGCTAGCCTAG
GATCTGCTTTGTTGTTCTGCTTCGCGGTCCGGCTAGCCTAGGATCTGCTTTGTAAGAGGG
TCATCTCACCATCATGTATCAGCTCTGTATTTTGTACGATTTGTGCCTTTATCTATAAAA
AGGGGCAAATGCCTGTTTCGAGAGTATGTGCCTGGTTGATCTTCACAGCCCATGCATGCA
TTATGGTCCCAAAAATAAGTGTCACTTTAAGATTTCGCAGCATTGCAGGTACTACCCAAA
TGCAGGTACGTGATTTCAATCTCGGACTACCAAATCCGACACCATGTATACATATCGAAA
TATATTAATATTTTCAGCACATACATCAGGATGAACATTTATAATGTATAAGGAACAATC
GACTCCAAAGAAGCAGATGTATAAATCCTACTGCCCAAGCAAAATTGAACTCCCATCCAA
AAACAAGAACCAATCATCCTCCCAGGCTTATTCGTCATCCATCCTCCTATTCGTGGGCTA
CAGAAGCCTGAAAATGCGTGCCAAGATCACTGGGAATACGCCTGGCCGGGGACAGCCACC
GGCCTGAGCTCGCCGCCACGGAGGAAGCCGGCATACCACTTGGCGGAGTGCCTCCGGTAC
CTCGTCCTCTCCTCGGAGTTGAAGTCGACGCCATAGAGGCCGAAGCCCATGCGGTAGCCA
AAGAGGAATTCGAACATGTCCACGAATGACCACACGAAGTAGCCCTGCACGTTCGACCCG
TTCCTGATCACCCAGCAACAGAGAGGAGAATGGTGACTAAACTGCATCAGTTTCTTTCAG
GTGTCCTCTACCGAGACGAATGGATCGTGTTGATACCTGCTGGATTGGAGGGTCGCCTCG
ATGTAATCCTGCAGGTACCGCGACCTGAACTCGTCGTCGAGGGCCTTATCACCAGAGGGA
TCAGCCACGCTGGCAGCTCCTGATGAATATTTCAGGTTGACGAGTGATCAAATGTTGATG
ATCTCACGGTATCATGATATTTAAGGTAGATGAGATTTATGTGAGTAGAATTTACCGTTC
TCGTGGATCATGACCACAGGGTTCTTGTATTTGACCTGGAGATGCTCCAGCATTTCCCTC
AGAACCCACGGTGACGACTGCAGTCAAATAGGAGCTGTTACAGTTTGATTTTAGCCAAAA
AGGCAGACAAAACATACAAATGATTTGGTTATGTCGAGAAATTTTTTAGTTTCCCAACTA
AATTGATTAGAGATGAAATGAACTGCATCGTCAAATACCTGGTTCTTTAAGTCAAAAAAT
GGCACTGCATGAAGAAATTTTCAGAAGAGTTAGGTTAATCCATCTCTCACATTGCATGGA
TTTTAGGTTATTAATATTCTTACCGCTTTCAAATCTCACTGCTGCATCACCCATGTAATC
TCTCAGCTTCTGATCCAGCTTGCTAAGATCAGCCTTCACATATGAGGCGGCGTAGTGGTT
AAATCCGACAAAATCAAAAGACCCAAGCACTCTCTTCAGCTCTTCAGCAGTGAAAGATGG
TAGCCTGGACCCAACATTCTTCCTCATCACTGGGGGATAATCTCCATGCACCAAAGGATG
CATATACCTGTGTCATGATCGCAAGATCTTTAGCATTTGGTGTAGTAACATACACATTCT
AGCTGTCCCTGTTAAAGTTGAAATGTACTCCCTCCATCCCAAAATAAGTGTCAGTGACTT
AGTATAAATATTGTATTAGTTTAGTTATAAATTTGCGACACTTATTTTGGGACGGAGGGA
GTAGAACATACCACCCAATGTGGAAGTCATTCATCCTTGCAGCTGCTGCTATATCCTCAG
GTGTTTGTGTCGCGGGCTTGTTCCACGAACCGAGCAATGTGAGTCCAATTTTTCCACCTT
GCTTGTCCTGATCATCAAGAAATGAGAAGTTTTAACATCGCATTTTCAAGAAATATAAGG
GAATATTACACCTATATCCTCAGTTTCAAGAAATAGAAGGGAATATTACACATGTGACTA
TGAGAATGACTGATTCCAAATGAACAGTTGTTCTGTAAAAGGTGGCATTGTTCCTAACCT
GGTACTTCTCTTTATACAGGGACACTGCCGAAGCATGTGCAAGCAGAAGATGGTGAGTTA
CTATATAGGGCTCTGTGGTAGAGTTGCCATTGTTGCAACTGATGCCGAAGGGCAATGAGC
ATCGCTGTGGTGGAAAGAATCCTTGGTCGTATCCGCCAATTGGCTCAATGTTTGGCTCAT
TCAGAGTGCTCCAATATTTCACCCTGTCACCAAAATTCTTGAAGCACACATCTGCATACA
CCGTGTAGTCATCTCTGCAACCATGTGACAAAAAAATTACACTTGCACCAATGACATTGA
ATATTAGCGCAAGAAGAGAAGTACATGAATTTACGACTAAGCATCCCGTTGTATTCGTCT
TGAAGAGCCTGAGGTAAGTCGAAATGATATACTGTTACGTGAGGCTGAATTCCTACAGGA
AACACAGGAAGATGCACGATTTATCCCTGCGTAGCTGGACATTTGGAATTCCTTGACTTT
CATTCCTAAATGGAGTATTCAGTATGCCAAGGATCAAATACCATGACGTAGGAGTTCATT
GATAAGGTTGTTGTAGTACTCCAGTCCCTTTGCATTGACAGCTCCTCGGCCATCTTCATG
GATTGCAATTGCAAGCAGAAGTCAGTGGAGTGTCTTTCTTAACTTTTCTGAAACACATCA
TTTAATATACGTAATATGGATCAGAGGGAGTAGTGCTTTTTACCAGGAATGAGCCGAGGC
CAGGCAATGGAAAATCGGTATGCATCAACGCCCATCTCACTCAAAAGCTTTACATCTTCC
TGGTGGTTGGTCAGAGTAAGTTTAGCACCGAATTCTTGGACTGAAAGTCCATCTGTTTAA
CACGACTTGGTCTCACAAATTAACCTTGTACTTATGATATTGATCTGCAGTCACATCAGC
AGTGGCTCCGCCGGGCGAGTAGCCTGTGGATGTTAAAACTCCATGTTATAATTCCCAATG
CAATAAGCATGGCAGATTCATGCTGACAAGGTGTGTGTGAACCGGTGAAATAAACCTGAG
TGTGTGAATGTGTCCCAGATGCTGGGTTTTCTTCCGTCCTCTGCAACTGCACCTTCAATC
TGGGAAATTAGCCAAATGTTCATGCTGGTATGTAGACCAAAGTATTTTATACAATGTGAA
AGCATTTTTATTACTTGTGGTATGAATTCTGATGATTTAAAAGGCAGTCTTGAGAGCAAA
GGCGGTTAATTTTGACTAGGGATGCAAGAGCCTGCCCCGCTAGGCCGACGAAATGCGATG
GATTAGTTCAGAATGCACTAGAAGATTCAAACTTCCTAACGAAAATGTCTCGACGTTGGA
AAGCTCAAAACGGGCTCTACCAGGCGTTGCTTTGCACCCTGAAATTTGACCAATCTTTCT
CAAAATAATAGTAATAATATTGTTGACCTTTTTTTCCTTATCGCTAAGGCCGCTCCAACA
CGGTACCTCAAAGCGGCAAAATTTCGTGTTTTGACCCTTTTAGTGAAGTAAGTCGAGATC
TGGCCCTCTTTTACAAAAAAAATGAGAATGAGATCTGACCCTTTTCCTACCGCCGGACCC
CATGGCGGTAAGGTATAACAACCTACTGCCAAGGTCCCTGACGGTAGAAAAAGGGACCAC
GTCAGCGCAGTGCATCCCTACCGCTACAAGTGCTGGCGGTAGCATATGTAACCCTACCGT
CAAAGTGCTTGGCAATAGGGTGCGCATGTGCACTGTGTCTGGAACTTAGAAATTTTCATG
GTAGGGCGTGCAACCCTACCGCCAGGGACCGTGGCGACAGGTTGTTGTATCCTACCATCA
TTGGATCCGACGGTAGGAAAAGGGTCAGATCTCAATTTTTTTGCTAACAAGGGTCGGATA
TTGACTTACTTCATTAAAGAGGTGAAAACACAAAATTTAACCCCTCAAAGCATCTCTAAA
TATTCGGAACGTGTGGTCCAGACACTTTATGACATCCAAAGGGTACCGTAGGTGCCCCTA
AGGCCATTTCCAATGCATTGGTGCTAAGATGAGGTGCTAAGCATATTAAATAGTTTAGCA
ACTAAAGTCCTCAATGCATAGTTGCTTAGCTTATTATAGCTAAGCCTCCTTATTTAATGC
TTTTGCAACTAAAGTTGTGTATGCATTGGTGCATTTAATTCATTTAATTGTTATACCTAG
GTTCACGCGCTTAGCATTATTTCTTTCTGGGGTCACCACACTCATCTCTCTCCTATTAAT
TAGGATGCCACATTAGATTTCTTGTCTACTCCCTCCATTCCTAAATATAAGACATTTTAG
AGATTGCACTATAAACTACATACGGATGTATATGGACATGTTTTAGAGTATACATTCACT
CATTTTGCTTCGTAAGTCTTCTAGTAAAATCTCTAAAAGGTCTTATATTTTAGAACGGAG
GGAGTATGTGGCAGCCTTAGCACCTGTACAAGGTGGAGCACTCGGAGTAGCCTAAATGTT
TCGATTGTGTGGTCCAAACACTTTATAACATCCAAGAGGGTACCTCAAAAGTTCAAGCAC
TAGTGCGGTTGTCTCACAAATCAGAGGCAAACCCAGGGAAGGTTTGAGGTATAAACCGGA
AGTTCGGTTAGTATATTTCGGTATTTTTTTTCTATTTTGGTTAGGCAAAATGCTAACCGA
AAATGGCTCCAAATCTTAGAAAACCGAAACTTTGATTAACCGATATTCAGTTTATACCGA
ATATACCGAAGACTGATTCGTCGACGTGTGCGCTGGACGCCTGGACCTCCTGGAGCTTAC
CCCATTATATAGCTGAGCTATCTATGCCCCATCCTGTATCCAGTCGATGTGGGACTAATC
CCACGACCACATCACGTCCAGCCGGTTTACAGGAAAATTGTATGGGTCACAGAGTACAAC
ACAAAAGGCTCAAAAACAGATACTTACCTTGCAGGCATACGGGTTGGCCTCAAGGGAATG
ATGCCCCCTGCCAAGGGCACACCAATCGCTGCATGGCGCGCCTTTTTGGCGACCTGCCCG
CGGGAGAAGCTTTTCTGAGGGTGTTTGTTTCCAGGGACTTATTGGTTTAGGGACTTAAAA
AAGTCCCTATAAGTCCCACCTAAACCAAACACAAAGGACTTATTGGGACTTATTGT