morexGenes - Barley RNA-seq Database

Contig contig_230422
Source Contig contig_230422
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_230422 (8548 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_230422

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32627	1	2785 bp	MLOC_32627.1	Available	Available	LOC_Os09g19830.1, FRAME:+1, EVALUE:3e-120, 13109.m01868 protein histone-lysine N-methyltransferase, putative, expressed
CDS Structure of MLOC_32627

Contig Sequence (8548 bp)

>contig_230422 8548 assembly3_WGSMorex_rbca.fasta
TCTGTTGGTATGAAGACATCACCAATTATTTTTTGCTAGTGGATGCCTTGCTCACGACTA
CAATTTCAGGTCATGGTGCTTCTCGGATTTTGAGGCAAGATGATTCTTATCACGAAACGG
AAAGCAAAAGAGAAGAGGTTAGAGGTGCCACCGACGCACACAATCATATGCAAGAATCTC
AAGTCGTCAATTGTGTCGCTCCAGATGATTTTGCGCACTGTCCACAAAATTCTGTTGGTA
TGAAGACATCACCAATCATTTTTTGCTAGTGGGTGTGCCTATGTAGTGGATGTCTTGCTC
ACAACTACAATTTCAGGTCATGGTGCTTCTCCGATTTTGAGGCGAGATGACTCTGATGCA
GAAATGGAAGGCAAAATAGAAGAGATTGGAGGAGCTACCGAGGCACACAATCAGAAGATC
CAAGAATCTCAAGTTGTCGATGTTATTGTTCAAGATGGTTTTGCAGGAGGCCAACACGGC
CACAATAATCCACGAAATGATGTTTCAAACGACTCGCCAATACATGGTTTTTCGGAGCAG
ATGAATGATAGAAGACTATTACGTGAAAGGAAGCGCGCACCGCTAGTAGTAGGGAACGCT
GAGATTAGAAGCAAACACAAAGTATGCTTGCATGAAGGCACTCCAAGGACTCAATCGGGA
GGCCCTCTTAATATGAAGAGAAAGGGCAAGAGTGCAGAGATTGTCAATATCAATGTGACA
TTGGTAGATGATGTAGGGGTCCTTGACGTGGTGCGCTCGGCATCCAAGTGTGGAGACCAT
GTTGGGACCGATCAAATTGAAGATAAGGATGATGTGGGCCTTAATACTAACAGGGTAATT
ATACAAGCATTGATGGCTCCAGACAGATGCCCTTGGACGCAACAAAGGAAATCTATTGCT
ATTGTTCCTAAACCGCTTGCTCCTAGGAACAATTTGAAGAAAAAGGTTGCTACTCCAAGG
AAAGAAGTGCGCTCGAAAGTTACCACTTCTACATATTCTAGACGCAAGGCAAGAATGGAC
GGAGAAGATTCCTCCTCAAAAGATGATGAGAAATCTTTGGCACTACTTGCGCATGAAAGA
AATAATAAATCATGCATCAGCATCCCTCAGTGCGGTCCTTCCGATGACGTGAGTGTTGAT
ACCCGAAGCAAAGTTACGAAGATTGATGAGAGAAGTCGATTGCGCGATCCAAAGGATGTA
CCACTTGTAGCGGTGGTTGGTGATGTAAAAAACAGATGTGTAGGAAGCTTGCAAGAAGGT
ACTCCAAGGACACATGTGAGAGCTCTTGTTAATGTGAAGACAAAGGGCAAGAGGCCAAAT
AATGTCAAGGTGAATGTGAGAGCTCTTGTTAATGTGAAGACAAAGGGCAAGATGAGAAAC
CAGATTTCAAGAACTCGGAGAGGAGTGGCGCGCTCCTCAAATATTAAAAACATGAAGAAA
GGCATGCTTGCTCAGAAGTTAAAGCGCGATGGCATCGGCAATGACTCCAGGAATAGGTTC
ACGAAGGTGTCTAAGTGTGTGGATCATCTTCCGACCAATCAAATTAAAGAGAATGATAAT
GTGGGCCTTGTTACCAACAGGATGACTGTATTAGCATTGATGGCTCCTGAAAAGTGCCCA
TGGACAGAAGGGAAGAGGCCTATTGCTGGTGTTTCCCAGTCTCTCACTTGTAGGAATAAT
AAATCTCTTACCATTCGTGAAGGCCTTTGTTTGCCTGACATATCTCAAGGAAAAGAGAGC
ATTCCCATATGTGTGATCAACACAATTGATGGCATGCTGCCAACGCCATTTAAGTACATC
ACCAAAGTCATATATCCACCCTCATATGCAAAAGCACCTTCAATAGGCTGTGACTGCACT
AACGGTTGCTCGGACTCTAATGAATGTGCTTGTGCTGTGAAAAATGGAGGGGAGATCCCA
TTCAATTTGAATAGCGCAATTGTTTATACAAAGCCTCTCATATATGAGTGTGGCCCATCG
TGCAGGTAGGGTGTTCAGTAACTTACATAACAAAATAGCATAACCTAGCTTGGCAAGAAT
AACCCATTAATATTTTTATTTTTAATGTCCGACAACATGTTCTTATTGCCAGCCCAATGT
TATACTAGTTCTGGCATGGTAAGTTTAGATTGGTAAATCCTGATGGCAGTGAAATATGGG
AAACTGTCTCATACAGCTGAAACCTACTTACCTGAAGTTGGTTTTGACAAAAAAAAAAAA
ATTGTTCACATTAGACAATTTAGGTTAAATTGAAATGGGGAGCTAACCAAATTGTCAAAA
CTGCATGCAGGTGCCCGCCATCATGCCACAATAGGGTGAGCCAGCACGGCCCCAAAGTTC
CACTGGAAATATTCAAGACGGGGAAGACAGGTTGGGGCGTAAGATCCCTCAGTTTTATCC
CTTCAGGTAGTTTTGTGTGTGAGTATGTAGGTGAGGTATTGCTAGAGAAAGAAGCTGAGA
GAACAGAAAATGATGAGTACCTTTTTGATATTGGTCGTGACGATGATGATGACGGTGACG
ATGATGATGATGAAGAATGTTCACAATCTTCTAAATCCGAGATGACGGCGGAGGGCTTGG
GCTATACAATAGATGCTGCAAAGTGCGGTAATGTTGGAAGATTCATCAACCATAGCTGCT
CTCCAAACATGCATGCACAGGATGTTCTGTGGGACCATGATGACAAGAAGATGCCGCATG
TTATGCTTTTTGCTGAAAAGAATATCCGTCCGCTACAAGAGCTTACTTACGATTATAATT
ATAACATAGGTAATGTGCGTAAGAATGGCAAGGTGAAGGAGAAGAAATGCTTTTGTGGTT
CGTCGAAGTGCCGCCTCAGACTTTACTAAGGTATTGGTGACTGGTGATGGTAATGTTCAT
TATTCAGCGGAGTGCAGTCCTGTCAGCGCAGTGCTCCTTGGTTTTACTCTCCCGGCCACC
TTGCAGTTGTCGATGACTTGTGATGTTGTTTTTCTTGGTACCCTAGCGTTGAATTAGTAC
TGCTTTTTAAAGAGCTGCATTAACTCTTTCTTTTTTTCTTGTGTGCCAGACTCAAAGAGT
TGTATTCTGCTGTTAGTTTTATTTTCAGAACCGAACCTGTACTGGGTACATGAGTTCTAG
CTGTAGCTTTTCCATCACAAATTTTACCCTGCGCAAGCGGGAGCTACGTGCATTGGGCTG
CCCTTTTAACCATTCCTGTTGTGCTGCCTTTTTTTCCAGATAGATAGATTCCCAGTTCTG
AATCCTACACTCAAATTGGACAATCCCAGTTCTATTGCCAGTTCTTTCCTTTTTTGCGGT
CTATTGCCAGTTCTGAAGCAAAGAAATATTTACTGGACAATCCCATAACAGCACCAAAAC
GAATCCCCATCCTTGCTAACTCACTGTCTTTGATCTTCCAGCCTTTCAGGGCAGCATGAA
TGATCAGTACACCGTTTATGAGCGTGCGCTCATTGAGCCATAGTAGTATCTCTTTGTCCA
TCTTAACTGGTTGCGAGAAGCCTGCATAAATTCTTTTAGCATACTGATTTTTTAGATGAA
AAGTCAATTTTTTGGTCATGAAGAAGTAAATCACATTTGGCATTTGGTAGATATGGGGCA
AGACGCAGACCACTCATTTCCAGTGGTCACAGCGTCAACTAAACGCTCTGGACTGGACCT
AACAAAACTAACTCAACTGTGCCATTTCTGACAAAAGATGATCAAACTTATGCCATTAGA
ATCCATCACCAGAATGTCTTGGTTCTTTATGGGGCTAACTGAAAATCCAATTCATTCTTT
CTCTTCTCGCCACACGAAGGCGGCTAGGGTTTCTCGACCGTCGTTTTGATCTGCTCAGGA
CGTCATCTAGGCGTGTGGAGGCACAGGGGGACTGCGTTCTTCATCAGGTTTGTACTCTCT
TGTTGTGTAGGTCTTTGTTCATGTGTCCCAATGACGATGTTGAGGTGGCGATGATATCGC
AGCAATGTCATAAGCCCCAACAGAGTTTGCACTGGTGGTAGGCTGATGGCGTGGTCCTGT
GGGGCAGCCGGATATATTGGGTAACACAATGGTGCCTATGGCGGCAGACCAGAATAATCA
AGCATAGTTTTTTAAAAGGAAAATTAAGCATAGTGTTGAATTTGGGCGAGCGTTAAGGTG
GCGCCGTAGTGCCTCCTCTTTTCGTCAAGCCTCAAATGTGTGTTTGGTGGTTCCGTGGCA
GATCTTCAATAGCTTGTTCACAGGCCCTGCCTGACATTGCTCAAGTGTGCGTTCTGTCCC
GCTTCTTGCAGCATGTTTCTACTGTGGTTCATGTAGTTGGTGTTTGTATTGCTGAAGTTT
CGGCCTTTGCAACTGCTCAGTCCTGATGATGGTTACTGGATCGGTAAGTTTTACGATTTT
CTTCATGGGTAGAAGATGGACTTGAGAGACTTTTGGTACCACGATGTACCACCTTCCTTC
CAGTTTATAGGGCTCAATCTCACTAACCAATGTCGATGATGATTGATGGAATAGTTTTTG
TAGTTTGCAAAAATACACAATTAATGTGCTTGTTTTACTCAAAAGGTTGTGTTTACCAAT
GCATTGCAATGCATGCATGCATGAACAAGAACTTTAACATGCATTGGTCAATGTTCTCTT
AATCTTTGCATGCAACGATTTAATGCACCTGGAAATCTGAACATGTGATGGGGAACGATC
AAATTGAGACTTGTAAAATGGAAAAACTAAAATTTTGAGATAAGCCCTATAAACCGAAAA
GAAGGAAGTAGAAACTGTTGCTACCTTCTTTTTCACGATAGATTGAATCCCCAAGAAATG
GGCCTATCCCTGCACACCCAAATGAGACAATTAGAGTATTAGACAGTTCTATTCCAGTCC
TAAAACTAAGATATGTCACTTGCCAATAAAGCATCAAAACGAATCATATCGTGTTCCCAA
TTCTTGGTAGCCTACTGTATTTGATCTTCCAGGGACACTCCCTCTCTGAATGCTCGGGAC
AAGATTATCATCGCCGCGCTCTTAGTAGCATCTCATTTTATCCATCTGGACATGTTGCGA
GAAGCCTGTGTACTCCCGTCGGCGCTGATTCTTGAAATTAAAAGTTAGTTTGATGGCCAT
GAAGTAGTAAGATCATTTTAAGCTCAAAACAGGCTTTCGTCCCGTTTTACATATAAAGCA
ACATCAGAAGAAGTATACGGCCGAATAATATAAGATGATGAGGTGACCCTCTTACAAAGC
CGACAAAAGGTAATACTCCAAACGAGAACCTAGTACCGGAATTCATCTACAAATGTACCA
GAATCTCTTAAGAGTTAAGTCCACAAAGAATGCCACAGCTTTTTCACGAATGGTATGGTC
AGCTTCACCCAAGTTGCCGAAGAAGAGAATAGAATCCATCAGTCCCTTAAGAACAATAGT
CACATTTCAAATCCATTTAGTACTCACTCACATACACTAGTATTTAAAGAAGACATTTGC
TTCCATTAGAAGATGACACTTCCTTCGGCATGTGCTGGTCCAAATAAGAGCAGAAACCAT
GGCCTAAACCAAAACAACCACCATGTGAAACCAGTCTGTCCTCATCTACTGATTTCAACA
TCACTATCTGAAATTTACATTAGTCCCATCATTTCGTCCAGGAAATCCAACTTTGCCCTC
ATTCAAGGTATTCACACTTTTCCCACAAAAAGCTAGCAAAATATTCGCACTTATAACTCC
AGAGATCAAGACTGGGAAGTAAGTTTTACCCTGTATATAGGATCAACGGCTAACTCCGCT
GAAATGAATGGGAGCAGCACTGAAAATTTCAACCGGAAGCAAATTTGGAAGTTGCGGGGT
TTGAATACGTTCAAAATGTTTGTGTGGCGGCTTGCTCACAACAGGTTGGCAAACAGGATG
AAGATTCAGAGGTTGGGAGCCTGCCCGGTGTGTCAACGGTTGCGTGAAGACGGCGGCCAC
ATTTTCCTTAAATGTAAGAAGGTAAAAGAACGTTGTAGCAGGCTGGCGTTCGGTGATCTT
AGGGAAATCTTGTTGCAGCACAACTCCGCCCATGAGATGCTTGGTGAATTGTGGAAAACT
TATACTAGTACCTCCCAGCTGAGGGCTCTTGTCTTGATGTGGTAGTGGTGTGATGTCCCC
AGGAACAAAGCCCAACGCAGGGGAGCCGGTTTCTAGTCTTCGGAATGTTTGCCATCGGGT
GGAGAAGGTTGTGGTGGAATTAATGCATTCAGTCCCAACGGAGAAGCCACCAAAGCAGGC
GGATTTGCACAAGTGGTCAGAGCCTCCTGATGATCATGTGAAAATAAACTTTAACGGGGC
TTTTAGTGAAAGGCTCAAATACTGGCAGATGAGTGTGCGTGATTCGCGACCAGGCTAGCA
ATTTTGTTGCTGCTGGAGCGGGAAAATCTGTGCACCTGAGAGATGCACTTCATTCTGAAG
CGGTGGCGTGATGACCCCAAAAAAGACAAATTTGGGATTTGTAATAAAAATGTACTGTTC
TGATCCAATTTGCTTTTTTGCTGAGAGTTACTCATATGTACAAATGATCTGAAATTCGGA
GTGCATATCGCACAGCAAATTGTCTACCGTGCAAAAAAATGGAATTTTATTTATATTTTT
CGTGAATTGTTTCTTGACCGAGTACAGATGAGCCTTGGCTCAGAAATGAATATTCTGCTC
AGTCTTGATTACTTTTTCTACTGAGAGATTAGCACTGAAAGTAAGCAAGTACAATCTAGG
GAATTTAATGCATGAAGGCTTATCTCCTAACCAAAGACCTTGCCAAAACCGGGTTCTCTT
GCCGTTTCCCACAATTTTTCTAGAATACTTAAAGAAAATAGGTTTCACTTTCATCAAACC
TTGCCAGAAGTGTGATTGTCCAGGTCTAGCTTTACACATGAACAGAGTAGATTTACCTAA
ATAATTCTTCCTAGTAAATGTTGCCACACTCCTTTTTCATTCTCTAATTTCCAAAGCCAC
TTAGACATTAAACAAATATTCATGATAGTAAGATCTACTACACTCAGGCCTCCCATATCT
TTAGGTAAGCAAACAGTTTCCCAATTAACAAAATGAAATTTCTTAGTATCTTCATCTTCT
TGCCAGAAAAGATATTGTCCTATATATATATCCGTACTGTTCTTTGGTCCTTTTCAGACA
TAGACATTATAAAAAAAAGGAATATTGATCAAACAAGACCTAAGTAAAGTTAACCTGCCT
CCATATGAATGGAATTTACTTTTCCAAGGACTTACTTTCTTCTCAACTTTCTCTACAGTA
GGATCCCAATCACTATTGCATAATCTTATAATTCTGCGCAAATTGGCCAGTACCACCTAG
CGGAGGGATCTCATCTGACTGTGCCACGGTTGCAGGGGAGGGGGATGCAAACCATGCGGA
GGTCCCTGCTGCATGCTTTAGCCGGGGTCGAATCCAAACGGAAGGATCAACGGTGACCCC
GTATCTCAGTTCTTCAGCCGGAATATGCGTATTGGCTTGCGAACCTGAAACACTGTTTGC
CTGAAAGAGAACAGGCAAGAAAGATAGTACTCCCTGTGTGTATCATTCAGAAAGAGGCTC
ATGCCCCCTGTGTGTATTATGTTGGTCGTTAACATTATCCGAAGCAAAAGTTATGGCGCT
GTTAAATTGGTTTGCTAGGTAAAAACATACTAGCAGATTGAGGTTTGAGTTTGACCGTAG
ATCATCTTGCAACACATTTTTTACAACATAAAAGCATACTATTGCTGCGCATTATCATGT
CGAAATCTTGAGAAAAAGCCGGTTTAATTACGCCCTAAGCAAAACAATAAAAAGAAACTT
GCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTCAGTCTGACGCTCTCCCAACTG
AGCTATCCCCGCTATGTGAGATTTTCTTCTCTTCCTTTTTATATTATTTAACACATGAAT
AATTAAGTTCGGGCTACGCAAAAATTATAAAAATCAAGTTCGCCCCTTCCGTACCGTTGG
ACCGTGTCGGCGGCCAACCCTCCCCCTCCCCCAGTCCTACCAGAACAGAAGCGGCTACTG
TGTTTGAGCACCAGCACTAGAAAGAAAGAGCGAGCACCAGCGATTTGGTTTGGAGAATCA
ACAAAGGCACCATCGCTCTTTAGGCCGTCGGTAGCCACGTCAAATTTGCTTCTGATCTCG
TTTTGTTTCACGCAAATTGTCACGTCCAACAGGGACGGAGCCGCATCTTGATCTATCGGA
CCACACCTTTTTTCTTCAAACACCTGTCTCATGTAAAGGATCTTACTTTCTTATCCGAAC
CATTTTTTCTAACATACGATCCTACATAACATACAAAACAACATGTTAAAGTTAGGCTAG
TGCTCTGCGTCCCCGCGCCGGCCGCACGATCCGTCAACCGCCGCGCGTCCGCATCGTTAG
ATCTCTATGCAACACTTTTTCTCCCATGCAGCAAAATTTCAACGCGATGCAGCAATTTTC
GTCAACGGTTGCAACAAAAAAAATTGTAGCAAAAAAAATATCTACGTGANNNNAGCAAAA
AAACGAAGCTGATGATGCGTGGTAGCAA