morexGenes - Barley RNA-seq Database

Contig contig_230406

Source Contig contig_230406

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_230406 (2681 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_230406

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32625	1	1224 bp	AK252370.1	Available	Available	None

CDS Structure of MLOC_32625

Contig Sequence (2681 bp)

>contig_230406 2681 assembly3_WGSMorex_rbca.fasta
TGCCGCCCTCCAGGTACCCTTCTTCCGTCTCATCTCATCTCGTCTCGCTTCAAAGATTGG
ATTCACTTCGTTCTGTGATGGGTCACGGCTACTCCTCTGCCTTTTACAGTACTAACGCGT
GTTTCTTGGCCTACAGTTCGAGTGGGCGTGGCAGCACCCAACCGAGTCGCTGGTCGTTCA
CAAGGCGGCCGCCGAATTCAAGTCGCTCGGCGGCATCGGCAACAAGGTCAAGCTCGCCTA
CACCATGCTCAACCTGTAAGGCTCCTCTCTCCTTCTCCTGTCTCTGCATTTCTAGCTGCT
CCATCCATGGATTCTTTTCTTGGGGACAGAATTGAGTAGCAACAGTATACTGAAGTGAAA
CGGTTGTTCTGATGCCTGTGTCTGTGTGTGTTGCCAGCTTGAATCTCACGGTGAACTTCT
TCTCCGCCAAGAATACCAAGTTCACCGCAGGCTGCTCGGCCCTCCCCTGCCACATGAAGA
CTATCGTTAGCCCGATGGAGGATCTCCCTTGCTACGTCCAGGGCCTTTCATCCGAGGACG
ATATTATGGAGCCTAGAGAGGATGAAGAAGAACCAGATGCGGCTGTTGGCGGTGATGCTT
CTGATCATGGTTTGCGGACACTGGATTTGGGAACCGGAATTGTAGGAGGTGAATCAAACA
CTGATGAGTTTTTTGTTCCGATGGAATGGAGTGAGGTCTTTGCATCAAGAATTTCAGAAT
CCTCTACAGCCCAACCAGTGGAAGAAGAAAACAGAATAGCTGGCTGTGATTTTGAATATA
CCATCGATGACTTCCGTGAATTAGACACTGATGAGATTTTTTGCTCCGATGGAACGGAAT
GAGGTCTGTGGATCAAGAATTTCAGAATCCTCTCTGGCCCAACCAGTGGAAGAAGAAACC
AGAGTCGCTGACTCTGATGTTGAATATCCCGTTGATGACTTCGGTTACATGGAATGGAGC
GGAATTCATGAGACATTGGAACTGCACGTGTCTAGAACACCACCTCGATGTTCCTCGAGC
TCGTGCAGCGATGATGCTGCTGGAAGATTAGTAAACTGTGTGACAAGGCAAGCATCTGCA
GTGTTGAAGGCAGGTTCAGACGATGGTAACCTTTTCTTCCATGAGATTGATGTGGTAGAC
TTGGTTACACCAGTCGCCCGATTTGCTAGAGATTGCAGCAAAGCGGCCAACATTTGCCCC
AAGATTATTGATCTGACAAACTCCCCTATTGTCATTGAGTTGTAATGCTTTGTTGGACTA
ACCCAGTACAAAATCTTGTTGTAGTAAAATGTTATCATAGAATAATAGCCCAGATGGGAA
GCGTATACAGTAGGCGGATTTGTAAAAGACTGGGTATTGAGACTCGCAATACTCTTTTCT
TGAGACAGAATTGTTCACACACACACAAAAAAAAGTATTTTTGTTGTTTTATGAGAAATG
GGTTAGTACTCCTAGGAGTATGTACTCCCATGCACTCCTAGGAGTATATATATACTAAAA
TATTAATATAACAAGCAATTTATAAATTATTCGGTTAGTCGTGCGTTGCACGTGCATGCT
AACTAGTAGGAAAAACGATCGGAACCTCAATCTCACAATAGTGTCCTCCGCGTGCTCCGT
GATGATCCACACGAGGGTCGTGAGCTCACAACCACAGCTGAGCCGCTTAGTCTGGGTCTC
CCTCCTGGCCCGGAATCCCGGATGCTCCGTGATGATCCACACGAGGGTCGTGAGCTCACA
ACCACAGCTGAGCCGCTTAGTCTGGGTCTCCCTCCTGGCCCGGAATCCCGGATGGACGTG
TACATGAGCAGATGCACCCAAGCTTCCAGGATGAACTTCAACTTGCTGTCATCATCATCA
GGAAGCTCCTGCAGACGTGGAATCCAGTGCGCAAGTTTACGCACAGCTTCTTCCACCCTA
GTTCCCCTCCGAACATGTTTTCTGACCAGCAGGACCTGGGCGATTTGAGTTCCTTCCAAG
AGAGTGGCAAGGCCCACGGGATAACCCTTCTTCAGTATTCCTGTCCTGATAGCAGCACTT
GGGTCCTTGAGATGGTCCACGTATTTCAGCATCCAGGTGCCAAGCTCCTTCGCCTTCTCT
CATTTTGTTGTATAACCACTACCGGACCTATCCTTCTCTTTAAAAAATTTTTGAATGAAA
GGGATTTCCCCCCGCCTCATTTTATTAAAATGAAGCAAGCAAAGATCCAGAACAAGGAGC
AAAGAAACTCCAACTACCAGCAGCCTAAAAATACCTCACAGCCAAAGTACGCTGGAACTT
ATTACAGGCCAAAATAGCTACCAAACTGGAGAGTTCAACAGACTCAAAGGAAAAAAAGGC
TAGAAAATAATATCTAATCTCGCCCTTCCACGGTCATCTCCAGGCAATGCGAAGAAGCTC
CCTTCGCCGTCTGTCCAGTTGCCTGATGAATCCACGGAGTAGTTCTGCCTGAGCACCCGA
GAGCAAGATCTTTCATTGATCGAGATGAATCCCCAGCTTTGCAAGAATGCAGTTGACATT
TCTCCAAACTCGTCCCTGAAAACATATTTCATTCCTAAGTTTCCAAACACTCCAAAGGGA
GGCAACAATAATCATATTAAGCACACGATTCTTCTTATGATCCCTCCAAAGTACAATCAC
ATCATCAAAACTTAAGCCCTTAGACTTCGCTGGCTTTGGGA