morexGenes - Barley RNA-seq Database

Contig contig_2297759

Source Contig contig_2297759

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2297759 (357 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2297759

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32563	1	302 bp	MLOC_32563.1	Available	Available	LOC_Os01g41710.1, FRAME:-3, EVALUE:2e-31, 13101.m04278 protein chlorophyll A-B binding protein, putative, expressed

CDS Structure of MLOC_32563

Contig Sequence (357 bp)

>contig_2297759 357 assembly3_WGSMorex_rbca.fasta
CCGGGACTAATGGGCTGGCCAGGGCCGAACGGTAGACCTGTTTTCTACTAGTGAAGCGAC
ATGAAAGTGCATAAATCAAACGGTTCTTTTGCACAAAATTCTCGTAATTTACATCATTGG
TAGTACAAGTGTACAACTCAGACCACAGGACACCACGCCTCATGGTGGGCATAGTCTCAA
GACACCTTACTTGCCGGGGACAAAGTTGGTAGCGAACGCCCATGCATTGTTGTTGACAGG
GTCGGCGATGTGGTCAGCGAGGTTCTCGAGTGGGCCCTTGCCCGTGACGATAGCTTGGAC
AAAGAAGCCAAACATTGAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTCACCTT