Contig Data
morexGenes
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Map Locations of contig_228317 (2742 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_228317

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32406 1 304 bp None Not available Available None
MLOC_32404 1 326 bp MLOC_32404.1 Available Available None
MLOC_32407 1 342 bp None Not available Available None
MLOC_32405 1 338 bp None Not available Available None





CDS Structure of MLOC_32406






CDS Structure of MLOC_32404






CDS Structure of MLOC_32407






CDS Structure of MLOC_32405






Contig Sequence (2742 bp)

>contig_228317 2742 assembly3_WGSMorex_rbca.fasta
GGTACTTTCCAAACAATGTCACTGAAAATATTATTTAAAGCACATGGTTTCTATTGGTGT
TCTGAAGAAAATGAATAATTTAATCAGTTTTTCAAAAAAGATGAAAGAGAATTTAATTGG
TATTATTAGTACAAGAAAAGGTAGACATGCATGATGCACTTTGTCAAATGATTCTCCTTT
TCTTTTTATTTCTATCACATCATGAGTGGATATAAGAAGAACTTTTTTAGAGAAAATTGT
TGTTTGGTTAATTCACCCTTTCTCATGCCCAAATCTTGGATAATAGCATAATGATGGCAA
CAACTATAGTTGCGGAGGAAATAATAAACATGAGGGTCGGAAGAATTAGAGGAAAGATCC
ACATGAATAGAAGGATTCATCTATGCGCAAGAAGAAAGCTTCTATATCCTCCAAATGGCT
AATGCAAATTATTGTTGTTATATATTAAAATCAAATTGGGACTACTATTCTGATAGAAAT
AGTTTCCTTATCACATTCATGATTAGATGCAAAAAACGAGTTATTATACACATAATTGAT
ATCTAGTATCCATAGATCTAGCTTGTTTGTACAACATAAATATAATAGACTGTATGTTGG
CATATTAACAAAACCAGTTGTATAAGATCAAACAATTGCTATTAAACTGTGTTGGCGTAT
CAAGATAATATAATATAAGTTCACTCTGCTGATTTTGGATTTATCTATGAGCTCACATCC
GTAGATTTATTCTCCTCGCATATTGTAGGAGAGAAAATCCTATATGCAAATTAAATAGCA
GGTAAATTTACACTCAGGTTAGCTGCAGATTCAATTTAAAACAGAAGCAAATGTAAAATA
GTTATACAGAATCCAGGTGGCCGACACCTATGATTAGTTAGTTAGTACACAACTAGCGTA
ACAAGCACCAAACCTGAAGACAAATATACAAGTCCAGGTCTAGTACTCCACTGCAGGTTC
ACCACACCATGAAGCAACATCTAAAATAGGCAACAACGAGATCTAAATATTAAAATTTCA
GATCTACAACATAAACATGTACTGCAACAATACTACTAACAAGTAGAAACTCGCTGACAC
GGAGCATCAGATCTGAAATGGTAAATGGGAACCAGAGAAGGAGGTATACCTTGCTCTTGG
TACTTGGCCAACTATCTCCATCATCTACAGCAATGCACCTCTCCTTGTAGATAGTCTCAG
CTGCAAGTTACCTACAAAGCAACGAAGAAGACAAAGATGATAAGCACATATAATTTGGAT
TGACCAACCTCTGTGGGTTGTCACAACTGCAAAAAGGTACAACAAGTCTGGATAAATTAG
CAGAAATCAACATGATATTCTCTAATTGAGATGTACCACAAGTGTGCCATTGTCAGGCAA
GTAGTATAAATGGTACCATACCAAATAATGTACTAGAGCATAAGTAACAGGCTGGATATC
AATAATCTACTTGGTACTGTGCCAAATAATGTACTACTGAATAATCAACAGGCTGGATAT
CTATGATCTACTTAGTGGCAACAGTAAAACCAAGATTCCTCCGTTGACCAATTTATGCAT
GGTAGAATACTAACACACCATGTGAAGCGATTCTTGCACCTTCATGATGCATTGGAATTA
CATCATTTGGTGTTTCTAAGCGAATTAACATAAGAAAGAACCAAGAAACGAGCTCCTGGA
TGTATAAGAAAATAGAGGACAAGCATAAGCATGTTGCTCTTCCGCAAAGAGCATAAGCAT
GTTGTTGTTCAACAAAGTTTTGTTCCAAATCTGCCCCCCTTGACACACAGATCCAGAGTA
TTTGAAGAATAACATAAACAGCTGAATGTCCTAAGGCATGGCGTAAGCGCACATAAATCA
GTAACAAAGACAATAGGTCTGCCACCAAAGCGGCAATGAACTATGCATTTGGAGAGTAAT
CAGCGGGTGACAGAACGGAAATAAAGCAAGAACGACGAGTATGCTGCAGCGCAGATCACG
AGTGAAAATTAAGGGTGGCGTTACCGAGAGCCCGTAACGTGCGCAGATCCAAGGCGTCGG
CGAGGTGGGGGCGACCGACCGTCTTGGCCTGCCTCACGGCCACCATCTTCAGGCTGATGA
GCAAATCCTGCAGGAAACCATCGAAGGTTGAAAAATCTGTGGTCGGAAGGAGAGATTACG
AGGGAAGTGGAGGACGGACGAGCTCGGGTTCGGAGAGGGCCGCGAGCCACCGCAACTCCT
TGGCGCTGGTGCTGCTCTCCGCGGCTCCCCGGACGGGGTTTCGCCGGTGGCGGCGGGTGG
CGACATGAGGAGGAAGAGGGGGTTCGCTTCGCTTGTTTTGTGTCTTTGGTTCGCGTCACC
TGCCCGAGCATGTCGCCCGGCTCGCAGACCAGGGCGGGCTTCTCCCCTAACATCGAGAGC
GTCACGGAGGTCACCCGATGCCTACCTCCCCTCCATTCTCCATCGTCGCCGCTGCCGCAG
GCCCGCGTCCACCGAGCGGATCAGAGCAGCGACGGCAGATCAGCTCTTCTCAGTGCGCAA
TTTGACGCCGCAGCTGCCTTTGGGCAGGGCCGGAGGGAAGCCAGTGAGAGATTGGCGAGC
CCGATCTCCCGTCGCCAGCCGGTGTCAGAACTGGAAGCGATCGGTCGCATTGAGCTGGGC
CTTGAGCGTGTTGGCCACCATGGCGAGGCGCGCGGGGCTCCGATCCGGAGGTCCTGGAGT
CCGTCGGGCCAACACGGGGGCGCAGAGCACGCGCGCGGGGGG