Contig Data
morexGenes
Links



Map Locations of contig_227821 (5013 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_227821

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32351 2 804 bp MLOC_32351.1 Available Available LOC_Os02g01170.1, FRAME:+2, EVALUE:7e-54, 13102.m00028 protein HECT-domain domain containing protein, expressed





CDS Structure of MLOC_32351






Contig Sequence (5013 bp)

>contig_227821 5013 assembly3_WGSMorex_rbca.fasta
CCTGCCATTATAAATGTAAGTGCACCTGTATTTTCCTATACCTTAATCTGGCACTGTATA
TGTTTAATGATATCTTGATCTTCTGCTTGTCTGCAGCTACTCGAGATCATGGCGGAATTT
ACCCCTGATCAACAGCATGCATTCTGCCAGTTTGTAACTGGTGCTTCTCGGCTTCCAACT
GGTGGTTTGGCTGCCCTTAGTCCCAGGCTTACCATAGTTCGAAAGGTGCTTTATGTCGAC
ATCTGCTGCATATGCGTCTTGGTTATTATTGTCTGCCATGTTTCTTTCTTAACCTGCTAT
CTCTTTCGATTGTCAGCACCCCTCGAGTGGGGTGAGTGCATTGAATACAAGCGGGGTAAC
AGACGCTGCGGATGACGATCTGCCCAGTGTCATGACGTGTGCCAATTATCTCAAACTACC
CCCGTATTCCACAAAAGTAAGCATGGTTTTATCCTCTGGTGTTTGGTGGCAAGTTTAACG
CGCTGTTGTATCCCCGCTAACTCGGCTTGTTTGGACGTGTTCTCGCAGGAAGTCATGCGC
AAGAAGCTGCTCTACGCCATCCTAGAAGGCCGTGGATCTTTTGATCTATCCTGAGCTGAT
AAACTAACGATACAGGGCTCACCATTGGATGCCCGTCAATTTTATCCCGAAATAGTTTTC
TTCTTCGTTGCCTGCAATAACATAGGTTGAGGTTACCAGCCGCTCCGCATAAAGCTTGAA
AGATCAGGTCCTAGCAGTTAATTACCAGCCTTAAGGTTCTGTTTGGCTTCGTTGTGAAGT
CTTTTGCTTCCCCTCATCCTCATGTGCTGTTTTGTGTTGTGTTTTTTCAGTCGAACCTGC
TGAAGCGGCGAGCCTCGCGAGCACCACCGACAAGTATCAGGAGCACCTTTCCTCCAATAC
ATTGTAAATAAAAAGGAGTAAACATATTTGTCGTAAGGATTTGTTCGCTCGTTGGCGATA
CCATGTCTTATGTACCGATTTGAGAATGTTGCTGTGTTTGCTTCGACTTTCTGTACATGT
GTAACTTGATAATAAATTCGTGCGCTCTAGTCTATTTGAGGTTATTCTTTGTCTCGTTTC
CGAGCTAGTCAGGGTGTAGACCAAACTTGAAACCCAGGTCTACGGAATTGGTTTGCTGGC
ATGTTAAATGCAAGCAACATTTTAAACATGGCAAATATGTTCGGTCAGTGTTCTTGCGCG
ATGTCGTGTTATTCCGTGGACTTCTCCACTACATTTCGATGTGGTGTCCTGCTACATTTC
TCCAATACTGGCGATGATACAGAAACAATGTGTTCATTGATAAATGTTAGGATGCTGATA
CCAAACAAGGAAACATTATGTGTTGCCTATATATGTTAGCACGAGTATATATATAGCTCC
AAGTAAATTGACCAAAACGAGACGTTCTAATAGAGAAAATGGTCACCAGAGATTTTGTTA
TTGGAATAAAACCACAAAAGCAACAGACCAGGGATTAATGTAAATCGTATTTTAGAGTCG
TGGGTAACTCAGCAGCAAAATGCCTTTCCAAAATCATCTACTCCAGAATAAGGAGTTCAT
TTGTATGAATTGAATCACTGGAAGTTTCTGGAAAGGCATTTGTGAATTTTGGTGAACTGG
AAGGAGTACATATGTTCTTCTTGATAACCACTATGTTGAGTATCGTGGTTGTTTAGATAC
ACTACGATTTGTTCGTGTTTGTACTCAAAAATGATCATATACTCCTATGTATATGCCCAC
GAGGCTCAAGCAATACAACAACTATTCCACCAATCTCTTTCTCTCTTTTAACATGGTATC
TGTCGCAAGTTCTTAGACCTAGCTGCCGTCCAACGCTTCCACCCCACGCGCCGCCCCCGG
GGCGATCGGCGTCAATGACAGCCGCCGGGGGCCGCGCCGCCCGTGCCTAGGGTTCGTCCG
CCGGTCGTGTTGATCGGCTATCCTAGAGAGTCTTTTTCCTAATCTCTTGATCTGGGTGTT
CTCTCTTCCGTTGGTCACTTTGATCGGCGTTTTTTTGGTTTTTCGACCTAAGATCGGTTT
GCGTCGCCGCCGCCGTCGTCGACCACGACGCCTCTACTCCGACATCGACGCGACCCGACC
TCTTCACCGACCCGGCGACCTCGCGTTACACGGCGGACCCTCACAACCATTGATTGCGCG
TTTGCTCGCCCGTCACCCTGCACCGGTCATTGCCGCCCTTCTCCAACCGGGACCGCTTCA
TCACCACCCGCCTCTAACGTCGCCCCGTACGGTCACGCACCGGCTGCCTCGGCCTGGCTA
CGTGGGCCTGGCTCCCGCCTCTTGCCGCATCGCCTGCCTCGGGCCGGTTGTCGGCTCCGG
TCGCGTCGGCCTCACCGCCTGCCTCGGGCCGACTGCTGGCTGGAGGCTCTGTCGGCCTCG
ACGGCTGCCTCGCACCGGCTACGTCGTCGGCCACGTCAGGCCTTTGTCCACGACGTGTCC
CCGGGCGATCCTGGAACGCCTAGTATGGCCCATCGTCAACATCAACTTTTTCCGTCTACG
CATGCCCGGTGCTGGAAACACCGACGCGTGCCTTCGTCCATGAAGTGTCCGTCCCCGAGT
TTGGAATACTCGGAGCGACATCTCGTCAACAATGTCTTCTTCCCGACGGACCACTACCTC
GACACCACTATGTCGATGACTAACTCGACGCCTCCGTGCCCCCATGGCTCCACGACGACT
ACCTCGACATTGGCCACCCCGACTGGAATACGACCACATCGACCCTCACACGGCTACCTC
GACCACGGCTATACCATGCTACCCTATCGGCTACATCGTGGCACAAAGGGCTACCGCCTT
GCAGGAGCAACATCGTCGGTTTTCACTCCAGCCACAACTTGCGCGATGCATCGACCGTTT
TGACTGTGTGTGTAGGGGTCTGGGATATCCGCCGGCTTACCTTCGGATTCTCCTCCAGTC
TCGCCGTCTGCATCACTACCATTGTGATTGCAGGGGGATTTTTATTAACCGTGGTTAGTT
AGTAAATATAGGATAGACTAGGAATTATTTAAGCTTGTCTTTTATTGCAAGTTAATCATG
TACTTATATATACATGCACACCAGAATCAAGCAATAAACATTAGTTCCACAAATCTCCCT
CTCTATCCGTCTTTACATTTAGAAACAAAAATGAAATCCAAACAGGATATCCGCTCTCGG
TGACTACTTACCTACTTTAGTTTGTGTTCCGCAAGTTAGTAGACAAAGTCGAACGACTAC
AAAAATACAGATGTAAGAGACAAGCCCGTACAGACGCAAGGTTTTGTGACTAAACAATGA
TTTAGCTTGAAGCTTCATCCATCATTTATAAGCAATAAAAGAAAGGGAACAACCGCGTCT
TGCCTTTGGTTATAAGGAAAGAATTGCGAGCAGAAGGAGTATCCAAAGCTATTAAAATGG
ATATTTATTTATTCAACCCAACTGACATTTTACAATAAATAACATGCTTCTTGTCACCGA
GCCAGCTGGAATTGGAATCCATTTTATTCATAGTGTACTCCTAGAATTCATCTCCTCTTG
CATGCATATACATAATACTTCACAATATCACAAATTCACAATATCACATCTACTAGCAGC
AGCAAGCAACATCACAAATAGCAACAACCAACATAGCAACAAGCCAGCAACATAATTCAT
AGTCTCATAATCTCATAATAATGTATAGTCTTCCATAGTTCAGTAGCAATGGTAGCAACA
AGAGGCAATAACTAAAGTCTCAAACTCTCAAACGTAGTCTTTCTCACAAACAAATATAAG
TAGAACAAGCAACAAGCATGAAGGCAGGGTAGTAGTTAACGATATTGGAAGTTCCAATCA
ATCGTACTCGGTCCACGTGGCTCAAGATAATCCATCCCATTGTCCTCCTCCTCCTCCTCA
TCATCATGTCCATCATTTGCACCCTCGTCTACTCTTGGCAGGTTTGTATGATAATTTCCT
TGAGAATGAGAACAAACCATGTCATTGTCCTCATCATCCTCAATCACAAGATCATCATCT
ACACAAGTTTTTGTGCTCAAAATCAGGAATAATGAGTAAAAACAGAAAAATGCCAAGTGT
GGGAATAGAAACATTACCTTTCATATTGCAATTTTTCTCAATGTCATTGTCATTTGGTGA
AATCCTTTGCGGAATAATTCTATCGATTCCACACTTAGTACAACAGGATCATCTTCAAGA
ATCCAATTTTCATCAAACTTGCCAATGTCCTCCAAACTAATTGGTTCATAGTTTCTAGTT
TGGTACATACACCTAAACATGCGATGAAATTATAAACCATACAACACACCAATAAAAAGA
ATAAACCAAGGAGTAGGGATAAGGATAACATAAAGAGAGCACCTTTGTTCCAGCCTTGAG
TTGTAGTGCACATAAGCAATATCATTCATCCTTTGATGCTCAAGTCTATTTCTTTTTTTT
GGAGTGAATATGCTCAAATAGACTCCAATTTCTCTCACAATCCGAAGCACTACAAGTTTC
GCTCGATACACAAATTGCAAGCTTTTGCAGGTGTGGAGCACTACAACCATAATTCGACCA
CCATTCATCTAGAGAAAGGAAAGCATATGCATATTTTAAAATCACTTAAGGCTGAAATTG
GAAAATGGATAACAAAAGATAAATGCATACCAGGAAGCATTATAGCTCGGTCACTAATGG
TTGTCACTCTTCCAAAATCATCTTCCGCACCTCTGAAAATCTTCATCTCTCGTGTCAAAG
CTTTGTGCAAATCTATATCATTTGATGCATACCTCTCAATAACATCAATAACTCCGGAGG
CAGTGGTGTGATACTTTGACATAAGCTCTTCATTGTATTGGTTGATTGGATTTAACCAAA
ATCCAGCTGCATGCAAATTTTTATTCAAGTTCTTATACCACCTCTCCTCTATAATTTTAA
GAACATGTTGTTGAATGGCTCTTTTCTTTCTTTGAATCCGCTTCTCAATCTTCTCAACTG
CAGGATATAATGCTCCAAATAGATACCCCATTG