Map Locations of contig_227755 (7886 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_227755

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32341 3 3970 bp AK364339 Available Available None
MLOC_32340 1 665 bp None Available Available None





CDS Structure of MLOC_32341






CDS Structure of MLOC_32340






Contig Sequence (7886 bp)

>contig_227755 7886 assembly3_WGSMorex_rbca.fasta
TATTTAAAGTAGAAACAAATGGAACTAAGAAGTAAAATAAAAAAAACTAAACTAAAAGAA
CAGACAGCCACGCATGGACGGTCCAAATAGGTGTGCTGCATCTTTTTCCAATGCCCAGAG
CGTAATATAGAAGGTGTCTACATGAGCCGGCCCAGTCTGAAGATTTTACTGTTTGGAACA
TTTTCTGTGACTTATAAGTGGCAATTGTGGGTAATTTTCATCAACTTTATGAACAATGTT
AATGACAGAAGCATTACTTACTTTATTAGTAGGTAAAGATAAGGATTTGAAGGTCAATGA
TGCCCATCGATAAGGATATCGATGAAGTTGTGAAACATTGAATATAGATGAAGTGACGAC
AACCTTGTAGCATTCTCCATGACAAAAAAAAGTCACAAAAGCTTAAAGACAAGAACAGCG
GTTTAACACGTAATGTTGTATGACGTAGAGCGTTAACCGATTAAAAAACAATATGTATAA
CGGTTAGGTATAACTGAGATGTATGTTGAGATGAATATGTGGTATGAGATAAAGCTGAAT
AGCACCGAATGAAGAGAAGGCTGTCCAATAAATGCCAAATGATTTTAAACATATTCAGCA
CAGGCCTTCACAATGCATAGCAAACAACTAAAGCTGTTAATAATATCAAAAGAGGCTGGG
TATACCAAACTTGAGAAATCAAAAAGACTTGTCACCAAAGAACTAGCCATGAACAGGGAT
TCATGAAAGCTTCCATGTACCTGAAATTGTTCACAAGATCTTATAAGATTCAACCCTAGC
CTACACCAATTTGTTTGAGACTGAACATTTCGCTGTTCCTATTTGTTTTCTTTGGTATCT
CAGAGATTGGACAGTTGCCTTGTATAGAAAACAGAGGGAGTATGTAGCTTTCTGAGATTA
TGTAGAATTGTATTACATGGTGTTATCCCAACAGGTAAATATTTACCCTAACAAACATGC
AACCGCGGCCTGAACATGAAACTTAAATAAACAAGCGAGCTATGCCAAAGTACAAGAAAC
CAACTTGCAATCTTATATATTACAAAGGTTGGGAAGGTACAAAGGGGCCTTGAGAAACAA
CGAAGGATAGTATCACATATCTCTCTCTAATCTAGACCTACAGAAGAATCCTTGCGAAGT
CAACAAGTCATCCCAAGGAGCCTGCTGGAGCTTACATTAGGGCTACACCGCAACTCCAGA
CAGAATCAACAAATTAAGCTGCGGAGCGAGCTGGTTCCATAAATGAACTTGCCACAGATC
TAGACTAGAGTTGGCAAAGATCTTATGACCTTCCATGAAAGAAACTTCGCTTGTTTGTTG
TTTTTGCCATGCCATTGCTAGACATGATTTTACCATCTGCCTTCAAGTCCCCAGTGTTTG
CAGATCTGTGTCGAAAAGGAAAGTTTGTGAGTTGAACAACTTACCAAAGGGACACCAGAC
CCTCCATTCCACCCGGCTCTGGAACCTCATGCTGTTGATGTCAAACTAACTCTGCGCAAA
GTAGCAAACAAATACCAAACAGCAGAGTATAAAGAAAACGGAGCAACATAGATACTCAAT
GTACAAGGATTGAGTTCAAGATCATGCCTCAATGACAACTTCTGGAATCCATCTGACTTC
ACACCTGCATGAGCTTTAAAAAGGACTTCAATCCCATTGTTCAGCTTTATAGACCAAATG
AGCAAATAAGGAAATTCAGATCATATCTAGAAACAACCACAAATCATTTCAAGAAGGAAA
GAATGCAAGACCTCTAATTCTTCAGGAAGGCCGCTCTGAGGAACTCCATTCCCACCAAAG
TGCAGATTTTCAACAAGTACATTTCCCATGTCCGTTTCTGCAATCTGCAGTAACTCTGCA
TTATTACCGCCCATGCTTTCACTTCCAACAAGCTCCAAAACGACCTTCTCGGCAACACGC
TTTAAAGTTGTACTCACTGCTACGGTTGGAGCAATGCTGTCCTTGACAGGTGAAATACAA
TCAACATGCTTGCTAGTCACGTCACCGGAACAAACAGCTTCAATTTTCACACACTTGGAG
CCTGATGCGACTGAATCCAAGCTTTTCTCAGATGCATGTGATGAACCTGAGCACTTTGTT
TGATCTTGATTTCCACTGCCAGGTGAATCCTGACTCCCACCACTTGCATTAGAAGTAACC
TTCTGTTGGCTGTTGCTTATGGGCTCATCACTAACATTGCCTGACCGAGGTGACGAAGTT
TTTGGGTGACCTGGGCTGATTGAAGCCCTCTTAACAGATTGGCAAGGTTCAGTATCATCA
ATCCCAGTAGAATCATGCTTTCTCTTCAGCTGGCTGTCTGGAGATCCATTTCCAGGGTCA
TTTTTATCAGACTGGTGCTGATGGTTCACATGCCTTTGAGGACGAGGTCTCTTGTATCCT
TCTGGAAAAACATAAGCTGGAATCTCTTTCCTACGGACATGAGAAACCGCCAACTCCATC
CCAGGTTTCCAGAACATATACATGTTGATCTCATGCCTGAACTCATCAACTGTTCCACGA
ATATCAAACTGCTGACCTTCTTGTATTTTCACACCTTCTTTCCTTGATAAGCCCATGAAG
AAAGCACAATGAGCACACTGTCTAGAAGGATCCGCATACTCATATGGGTATGGATGGCAT
TGCAATTTCCCATAGGTGTCCCGTTCAATCTGCAAGTGTCGAGCAAAATCCGCAGGCTAA
ACAGTCAAGCATCAGACATAAATAGTAAGAACACGGTTGAAACTGAAACACAGGGTCTAT
TTGCTGTTCGAAATAGGCATGCAAATTGTCACCCTACAAGTTCCCAACCCAATCACTAAA
TTCCACTCTGACCCTCCCCTTTATAATTGTTCTGCAGTTCAGAAAGACTTAACTTCTACA
TAATCCAAGAATCAAAACAATGCAATCCCGATTCCACAACCAGGAATTCCCATAACAACT
CAACTAATGCAGTATAGGCCCAAAAGGAAGTGAAGCCGTGCACAAATATGAGCATATACA
ACACACTATTACCTTTAAAGTCAGTTGCCTCAATCGAGACTCCACCCATCCCTTCCAAAG
TCTGAGATCTTCATCATCCTCAGCGATGATGTCAACTTGCAAATAATTTTTATACGCCTC
AAAAAAATTGAAAGGCTCAAAAAGGGCAGACCAACTAGCCTTATTCATCTCAATTTCCTG
CATTAAAGAGTTGGGAACAGTCAAAAAAAGCAGTTGCTGAATACTACCTCCATACCAAAA
TATAAGGCATTTTGATACAGAGTAGTAATTATGATGCCAGAGAAAATACCTGGCATATTT
TATTGCCAAACTGGAATTGTTCTATCATAACCCTCAGTGTGCTCGTCGAAACATTATAGC
TGGAGTTCATGCAAGGATATGCTGGGGTGATAATGGGCATATGATGAGTTCTGTCACGAG
GATTTTTGCGGGGATCCCACACAGGAAAGCCAAGTTCCTCCTCCTCAATGGCACAAAGCA
TCACTGGAGTTGGCCAGCGCCACTGCGTAAAAACCCTGAAAAATCTCGAGACCAGCATAC
TTGGCACGGCATTAGGATAGAGCTGGCAGACTCGTGCGACCAGTAAAGCCCAATTCACAC
CTCCAAGAAAACCAGTAACCTAGCAAGCCAGATATTGGATTAATCCTAGAAATTCAAATG
TAGTTACCAACATTTAGTAAAACCACACCTACATTAGAATAAACACCTCTTCTTCTCGCC
CAGTGCTTTAAACACCTTAGTGTTGTTCGAAAGCTCTACAACAGAAGTATGTATATTGTT
AATATTGCCATTCTAGAAAATAAAGATGAAAAAATGTTGAGTAGATTAAAAGTAGATTAT
AGTTCCTTGAGTCAACCTCAATATTAGGAACAAGCCTAAGAATTTGGTCAGCCACTCTGC
AGCCAGTAAGACTACGAACAGTTGCCTCATCAATGTCATAAAGCACTGCTTCCTGAGAGA
TATCCAAATCCTGCAGCAACATGTTAAGACAAAGATGTATCTCTTGAAACATTCGAGATC
AATATAGGCAAGCAGGAATGGACTTCTAAAGAGTATTTCCCTTCCACAGTTCAAAGAACA
CGAGCACGAACGGAATTAAACAGCTGACAAAATCAACAGCAGAGGAAGTGTTGAATTGAT
GGCTGTGAATTGTCCTCTTATCACCGCAGGACTGTTAGTGAAGAACTGTCCCAAGTAGCA
AAAGAAGTAATTTTACAAAATACAATTTGGCAATATATGCATGATAATAAGGAATAAACG
GTTAATTCTAGGAAGGAGTTCTGCCAATGGCAACAACTAGGCTTTACCGTGAGGTCAGCA
AACAGGATTAATGGATAATGATGATGGGAGATTTAAGAGTTAGTCACCACAAGAAAATCA
ACATCAAAGTTACATTCACATCCAACATAATACGAACATTGCAACTTAAATATGCTTGCT
AAGAGAACTAGTTTTCACCCAAAAAAACAGACCTTCAACATAACTGCTCTAACACTTCCC
CATATGTTAGAAAACACTATGAAACAAGCACACAGAAGTACAAGTAGATCACGCTATGAA
TAGCAGGACAAACCTACATTACCCACCTACAGTACTAGCACACCAAGCTGAAAACAGGGT
ATATGTGATTACTATGAAATTATCACAAAAAAGTAAGAGTAATCCATCAGGATGAGAAGG
AAAGCAGATATTAGGAGGAACCGTACTAGTTCGTATTCACCCCTACTTAAACTTGGTATG
AATTGAGAAACAAATAAATGCACGAATATATTTTATAGGAAATACAAACTTACAGATGGT
ACTACAAGAAGAGAAACGCTGGCATATAGAAGGTCAATCGATATCCCATGGAACTTAAAT
TTCATCACAGGTACATGTGCATCAGGTACAGGTTGCAATTGACTGACGTCCTCCGTTTGT
GCTAATATGTCATGCAGTACAATGAAGAAGTCTTCCTGTGAAAAACTACTATGTTAGGAA
ACACCAATGCTATAGCTAACACAAAACCACACTAGAGGCCCACAACAAGACAAAATATTA
CCTCGCGGTTCACATATGAAGGTCCAACACATAGAGTATCGATGTCAGCCCCAGGTCCAT
GGACCTACCAAAACGTAAGTATCAAATTAAGCACAGGTGGATCATTTTCTAAGAAGGATA
ACACCACACACCGCAAAGAACACACACACAAACACCACACACCACACACCAATTAAGAGA
AACACCACACACCGCGAAATGAGATGCATGCACATACAATAACATCACATATGCTCTAAC
TAGCCAGAGAATAAGAGTACATAACTATCTATAAGTTGCATCAGAAGCTCAAATCAGTTA
GGAAAATGTGAAGAAAATGATTAAGGAACATTCATAAGAAAAATAAGACAATGCAAGGTG
GAAAAATGAACAAATTAGCAACAGGCGCGAACATGAACATGTGTTTCTTTGTTGGTAATA
ATAGGCTTGAACCAAGTGCAAAAGCAAACCAAATAACTTGTAGCTGTATGGACACCAAAA
GTACCATGCCACCACGCTAAAAAATGTGACATGTACTTCCCCACAAGCCAGAACGAGGAA
TAAACTGACCATGTACCTAGCAACCATAGGAAGGGTGCTTGGCTTTCCTGTGTTCCAATG
TCTCTTTACGACAACTCTTATATAATATTTGATTAGGCGTAAGTTCCAGGTTTCCAATGC
AGTAAGGCACGTTAGGGCGATCAACCCCCACCTTACCGCCAAATGGAAGCTTAAACGGCT
AAAAGCCTGAGGCGGCAGAAGTTCCACGGCGCTACCAGTGCACCTTACCACATAAGCGAC
ATTCAAACGCCACCATATATGGACACCGTAAAACATGGCTAAGTTCAGAACCTGCCATTT
AGGGCAACCAAACTAATATTGGTAGATATTAAAGCAAGACATATTTGATTACACATGCTG
CTAAAGTAGTGATATAAACACTCTTATATTTCTTTACAGAGGGAGTACAAAACACTAACG
TAGAATTGACTAGGGTATGTGGTGGGCAAAAAATGAAAACCGAACAACGAACCGAATACA
ATGGACTTTTCAGTTAATTCCGTACTCGCCTGGAATTTCAGTAGTGAATTGCAACCAAAC
AAACTGGATTTGGTCACTTCTGCACTTGGCTGAATATAAATGAAAATTAACAAGCTGCTA
ATCTAGCCCATCACTAAAACACAGTAGGCCACCAGCTCTTTAAGGCACAAACCATCATCA
GTGCTCCATCTAAAAAAGCACACAGCAGCAGTGCAAATGCTCAGAGCCCACCATCTCCAA
CTCATACCCCGATGCCATACCCTAACCACCAGCTCTATATCCTGGTGGTCTGGCATCACC
TACCCTGTGTTGCCAACATCAACCAAATTGGTAAGATATCTGGATCACAGATTCTTTGTT
CGAATTGGTGCCTACTTCCATAGTATTATGTGTTTCTTTTCTTCACACAGATGCAACAAA
TGTTAGTTCAGTTTGTACCAAAATAAAATCAGTTTCAAGTTATACTTGTTTCCATGGCTT
GTTCAGAAACCAATATATTACAAAAATGCTATATAACCAACCCAAAATGCCAGTCTAAAC
CGAAACCCCGTGGCTACTCAAGCAAGCAATCATTCAACTAATTATCAAACAAAAACAAAG
GTAGCCCAGCAAAACAGTGCTGCTTTAACAGGCCTGATGCGATAGAAACTTTAAGCTATA
ATATGCATGGTAGAAAGCAACACATACACTTACCCCTAGACGGTATGACCCAAAGGTGAA
AAGCACAGCATTTGCCTCTTCAACCATTTGATCAGTATATCCTCTCTGACTAGTTAACTG
TTTCACCCAAACTTTTACAATCTGCAAATTCAAACAAGGGCCTTGTTCAGCAGTCAACAA
TCTAGCAAGCATTGTTTCAATCAGTAAGCAATAGAACAAAATAGTCAAAGATTCACATCC
AACTGTGTGTCCTTTTTATATATCATACAAAAGCAGGTAAGAAACAGCGTTGCAAGAAAG
TAAACACCTTGTCAAGCTCCCCCAGCACCTCCTCCCGCCTAGCAGACTCATCGGCACTTT
CATATAGGCCGGCTTCAACCAAAAACTGCAATTATGGTAACAAATAAAACAGTCTTGAGT
AACAAAATCATCTTCTGGGAAACAATCAGTAACTGAATGAGTAGCTACTACTAACCTTGT
TCAACTCCGCTGTCCTCTGGACATCAGCGTCCAATGGCCCAGCCAGTGATATTGGCTTAT
TAGAGGTCGCCATTTATCACACAACAACGGCAGCACCTCTAATCTAAGATGATGCAAGCA
AGTAATCCTCACTCCCGGACAAGCCGCCTTCAGGACAAAATCTAACGGAACAGGAAACGC
TAAATCGCACAGATCGGCGCCTCGGAGCACTGAAAAGGGTTGACAAAATTCGAGGCTAGC
CGCCCCAAAATCGAAGCTTTTCGCACGAAACGGAACAGAGCACGACCTGCCTCGGATGAA
ACCAGAGCCCACGACCGCCACCTCTATATTGACCCTCAAAGGAAGCACGAGTACTAGTCG
GACACGAGCAGGGGGGTCGTGCGATAGACGGGTCCAAACAAGAAGGACGCGGAAACCTTC
ATCACCCGGGGAAACCCCCCACCCCCTGAATCCGAGCCCCCGGCCGCAGAATCGCCCCCA
CGGAGCCCGACGGGATCGCGCCGCCCGGATCGGATCGAAACCCCGGCTGGATCGGCGGGC
GGGAGACGAGGACGCGGCTCGAGATCGGGCACGGACACGGATCCGGCCGGCCGGCCGGAG
GGGGGGGGGGGGGGGCGGGACGGCGGGGGGCGCCCCCGGGCGCGGGGGGGGGGGGGGGGG
GGGCGGGGGGGGCGCGGGACTCCGGG