| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_227306
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_32301 |
1 |
130 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_32301
Contig Sequence (10974 bp)
>contig_227306 10974 assembly3_WGSMorex_rbca.fasta
CGTTGAATCGCAACCAAGAGAGCGGACGTCTCCTTCTTTGGAAGAACTACTTTGATACAA
CAAATCCGTTGTTCAAACGTCAGAAATTCCACCGTCGTTTCCGTAAGAGTAGGCATCTTT
TTAACCGTATTAGAGAGGGGGTGGTCGGCTACGATGACTATTTCGAGTGCAAAGAGGATG
CCTTGGAAAGACTAGTTTCTCCTCTTATCAGAAATGCACTGCCGCCATCCGAATGCTTGC
ATACGGAGTGCCTGGTGATCTCATTGACGAGTACATCCGTATGAGCAAGTATACATGTGT
AGACTCCGTGTATAAGTTCTGCAAGGCTGTTATTGCTGTGTTTGGCCCTGAGTACTTGAG
AGAGCCGACTCCTGAAGATACAACCCGTTTGTTGGCGATGAACGCGAGCAGGGGCTTCCA
GGGATGCTTGGCAGCATAGACTGCATGCACTGGGAATGGAAGAATTGTCCTTCTCCTTGG
CAAGGGCAGTATAAGGGTCATGTCAGGGCTTGCACTGTCATACTAGAGGCCGTGGTGTCT
CATGATCTCTGGATCTGACACTCTTTCTTTGGCATGGACGGATCACACAATGATATCAAT
GTGCTTCAGCGCTCTCTGGTGTTTGCTAGGCTTGCCGAAGGCAATAGCCCATCGGTGAAC
TTTACTATCAACGGACCAACTATGAGAAAGGATACTATATGGGTGACGGTATCTATCCTC
GGTAGACCATTACTGTCAAGACAATTTAGATCCCGTCGGAGAGAAGAGGAAAAGATTTTC
CCCAAGAGCAAGAGAGTGCTAGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATCGTTCGGTATCCTGCTAATACGTGGAGCACGCAGAAACTTTGGAAGGTGA
TGACTGTTTGTGTGATCATGCATAATATGATCGTAGAAGATGAGCATCCGGAACGTCTGT
ACGATCAAGGGTTTCAGTTTCAGGGTGAGAATGTTGTGCCCGAGCATGGCGGAGCGACAA
TGTTTGAACAATTGACCCAATTTCATCATGACATGCATGATTGGGAAACTAACGTGCAAC
TTCAAAATGATTTGGTTGAGCANNNNNNNGCTCATGTTGGCAACCAATAGATGTATCTTC
TTTATTCGGCTTGTAAAACTATGTTATTTTATTCGATTGAAACTATGCTATTTTATTTGT
CTATATGTTTGAATGCAAAAGCAATGCGAAAATGGGCTATTTGTTGAAATAGAGCGGTCA
GCCAACCACGTCGGCACATATGTGTCGGCGCGTTGGATGCAGTGCCGATCCAAATCTGAA
ACAGGACGGACGCCGGACAGACGGTCGACCCAAACTGAGAAAAAGCGGACAAAATCACCG
TCCGTTTGGGTTGTTCCGTTCAAGTTGATCTTATGCTACACCTAAATCATTCCTTGGAAG
CTCACAAGAGTGTAACGTGGAGTCCAGCATTATGCAGTGGCAGCGTCGTCCTTGGCTTGC
ACGCCATGTCAATGGCATGAGCGTCGGCAATCATTTCCTCCAGATCCAACGTCTCTGCCT
GGCCCCAACAGAATGCAGGGGACACTTTGTCTTCACTTACAGCAATCAGGAGGGCACCAG
TCCCGTCTGAAAACAAAATAATTTTGTACGTCCATGTACCATGCGAGAATTCTACAGTCT
TTGTAGGTTCATGCCACCATATCCATTCGCTGCCTGCATCTATATACGGCTGCGCTGCGT
GCATCCCATCGCTGCATGCATGATTGGGAAACAAACATGCATACTTGCACGCTACGTGCA
ACCGACGGATCATCCTCAGGGGACATTTTGTCTTCAGTTACAGCAAGTGTAGGTTCATTC
AACTATATACGGTTGCGCTGCCTAATCCCATCGCTGCATCTGCATGCATGATTGGCGAAC
AAACAGGCATGTCTGCAGTTACGTGCAACCAAGCAGTGGATCATCCTCGGGAGGCATCCA
ATGGATATGCATGGATGATGGATCGAACGCCGGGCAGCCAAAGATCCGCCCAAAGGCCAC
CGCAGCGGCGAACAAGCGGCTCCTCGGAGGCAGAAAAGCCAATAACAGTGCGGCTTTCAT
GGGCAGAAGATATGCCGGGACGCGACTGTGTCCATGCTCAACGTCGCTTGCTCCAGGACA
GCGAAATCCGCAATCCATACTAGTGAGTACATAGCTGGGTAATGCATGCATTCCTGTGGG
GCTGAAAATTGTATGCTTATATGAATCAAAACAGTCGGACATGGACTAATTCAGGGCCTT
CTTCCTGGATGGATATAGGCTACAACGATTTGCTCAATGACCCGCACACGGCACCCGCGG
AGGCATCTTTCTACTATGGGACTAAGACAAAGGTCAATGCTCTAACATTCAGATGGACGA
ATTTTGTTTATTGACAGAAGTCCTCATTTTATCGTCCAATAAGAGTTTCAAGATTACGAC
AGGATACAGTCCAGCAACTTCAAATAGAAAAGAGGACTTTTACACCGAGCTTCTAGTGCA
TAAACCACCACTTGGTGATCGTTGGCTTCTTTGTGGGGACTTTAACCAAATGTACAGAGC
TCGTGACAAAAACAAATCAATTTTCAACAAAAGACGTATCAATAGATTCCGGAAGGCTCT
CTCGAGTGGGGAGCTGAATGAGATTCATCTTCAAAGTCGACGTTTCACCTCGAGCAATGA
GCGGCAAAACTCCACGGTAAGAAAAGTAGATTCCTTTTTTGTAACTCAGAATGGGACACC
TCCTTTCAAGGCCATATACTGTACGCGCTCTCGTCATCGCGCTCGGACCATTGCCTGTTG
CTCCTTTCTCAAGCCCACGGACCAAAACGACCAAGAAATTTTCGGTTCGAAAACTTTTAG
ATTTCAATGCCCGACTTTAAGAAGGTAGTCCAGGACGCTTGGGCAACGCAAACTGGACAT
GTAGAACCCTACCACATTCTGTTTCACAAATTGCGCAAAACTGCCTACATGCTTAAAATG
TTGGAGCAAGCGATTATTCTCCAATGCAATAATTCAACTCCACATGGCCTTGCATGTCAT
TCTTCATCTCTACATGGCCCAAGATTCTCGAGTTCTTTCTCAACAAGAATCAGATTTACG
GGCTAGACTAAAGAGGAGGGTCATTAGTCTGGCCGCGTTGGAAAGGGCCAGGAAAAAACA
ATGCGCGAGGGTGAAGGATTTGAAGGAAGGGGACGCTAATACCAAGTACTTTCATCTTAG
GGTCAATACGAGACGGGAGAAGAACTACATCCACATGCTCAAAGTGGGTCCGGGTTGGGT
AACCTCCCATGAGGAAAAAGCAAAAATTGCACAAGAACACTTCTTCGTTGTTCTTCAAAA
AGGGCCACCTCGGTCTCGAGATCTTATTTGGGAGGCTCTTCAGTTCAATAATTGTGACCT
ATTCAGTCTTGGAGACAACTTCACGGAGGATGAGGTTCTGACCGCCATCTCGCAAATGTC
GGGTGACAAGGCACCAGGTCCAGATGGTTTTACAGGGGCTTTCTTTAAATCTTGTTGGAC
AATCATTAAGGAGGTTATGATGAATGCCGTGAACTCCCTCTCGAATCTTCAAACCGCAAA
TCTGCACTGGCTAAACTCGTCTAACATTGTGTTACTGCCCAAGAAAGAGGGCGCGGAGGA
CATTTCGGATTTCCATCCCACCAGTCTCATACATGCTTTCGCAAAGATTCTATCCAAAAT
TGTGGCAACCCGACTAGCTCCCTTCATGAATGGATTAGTATCCCGTTCTCAAAGCGCTTT
CGTCAAATCAAGAAGTATACATGAGAATTTTATGTTTGTGCACGGCCTTGCCCGTCGCCG
CCTTCGGACCAAGACTCCTTCCTTGTTGCTAAAGTTGGACATTAAGAAGGCTTTTGACTC
CATCCGTTGGGATTATCTAATGGATTTGCTCCAGCGACGCGGTTTCCTCGCCAGATTCAA
AAAATGGGTCACTGCTATTTGGGCTACCTCATCTTTGAGAGTCCTTCTCAATGGTATTCC
GGGCATGCCAATCAAACTCGGGAAAGGTCTATGCCACGGTTACTCACTATTATCTCTTCT
ATTCGTCATCGCTATCGACCCTTTGGAGCAGCTAATTTATAAGGCCACAGAACAAGGCCT
TCTTCATCGTCTTTGTTGTCAGGCTATCGCAGTGCGTACCCCCCTATACGCTGATGACAC
GGCTATCTTCATTGCTCCTATTAAAGAGGATATCCAAAACCAAGCGACCATTCTGACCAG
CTTTGGGAAAGTTACAGGACTTATGGCCAACCCGCGTAAGAGTATTGTTGCGCCCATCCA
TTGTGCAGACATCGATTTGGATGACATCCTTCAAAGTTTCCCTGCCATCAGAACTGGATT
CCCGATGTGTTATCTGGGCCTTCCTCTTTCCACACACAGCCTCACGAAATCAGACTGCCA
ATTCTTGGTGGACAAGGTGGCTCGGAAATTCCTCCCTTGGCAAGGCAGAAACATTAACAT
TGTCGGGCGATCCACTCTAGTTAAATTCGTGCTATCCTCCCAGGCTATATACTTCATCAA
CGCGCTTGACATTCTAGTTGGGACCTCTGTGGACATAACTAAGATTCAACGGGCCTTTTT
GTGGGTAGGCACCAATACTGTGTCTGGAGGTCAGTGCAAGGTCAACTGGAAGCTAGCTGG
TTTGCAAACCATTGAACCTCGGTGGATTGGGAATCCTCGACCTCGATAAGTTCTCCAAAG
CTCCCAGACTCCGGTGGCATTGGTTCCACTGGGTGGACCCCCCAAAGAGCTTGGGTTTAT
TTTGACATCCCTTGCGACGATGGTGACATGGATTTGTTCTACTCTCGACGACTGTGACCA
TAGGTGGTGGCATGAAGGCGAGTTTCTAGTTCACCCCTTGATTACAAGGACAAAAACCAT
AGGACATGGCTCCGGGCATCTTCGCCCTCTCCAAGCGCAAGAAGGCATGTGTAGCACACG
CACTCACAAGCAATGAATGCATCCGCCGCACTGACATGCAGAGAGGACTCTCTGTCGTTC
ACATACAACAATTTGTTGATCTATAGAGCAAGGTTTAGGAGGTACAACTAGAGACGAGCA
CGGAGGATGGCATTCGATGGAAATTTACGGCACATGGACACCACTGTGCCGCCACAGCCT
ACAGAATCCAATTCACTGGGTTGATTAAATCAGACGTGCCAACGATGGTCTGGAATGTTT
GGGCGCCGCCTAAAATTAGATTCTTGTCATGGCTCATTCTCCAAGACAGAGTGTGCACGC
CGGATAGACTAGCCCATAGGGGCTGGCCCAATTGCAACCTTTGTTAGCTTTGCAAAAGAG
AACTAGAATCTGATGCCCACCTCTTTTTTAAATGCCGCTACTCGGTCAGGATTTGGAACT
CGATCAATGATTGGCTGGGAATTTAATCACAGACCAATGCATGAGAATACCTTTCGTCTG
TTGAGAAGTGGTGGGATGCTGACGGGCCCATCAACGACGCACACAAAAGGCTATAAAATC
TCTGAAGATGTTAATTTGCTAGGCAATTTGGAATGAGAGGAATGCTAGGGTATTTCAGAA
CAAGGCACCTTTGCCTACCCACGTTGTTACATCCATTAAGGTAGAGTCATAGTTATGGAT
AAAAGCAGGAGCTAAGTATCTCGGGATCATTATCCCGGGAGAGTAATCAATTTTATCTTC
TCTTTGTCCTGTGTGGCCATGTAACCGACAATTCATACTCTTCTCTTCTTAATTAATGCG
ATGAGGCAAATCGTTTGCCTCCGTTTGAAAAAAAACTTCTTGTGGGTGATGTGGGGCTAT
GGTCTCGGATAAATATCTGAGCTCCTTGTAACTCGATCTTAGCATCTTAGACCATATTCA
ACTGGACCCTTTAAACCCGTCTCGTACGTCCGAGCAAACCATCTGATCACTAACCGGTTA
CAAAAATTTAACCTAGAAGGGCTTTTTAAAAGGGCCTCAAACGTATGGGCTGACCGACAC
CCCTCATATCCAGTCCAAATATGAGGAGGATATGAAGAAGCCCGGGCCCGTCCGGGCATG
CCCGCCAGTCGGATCCGACAACCCAAAACCACCGCAAATTGCCTCCAAATTCTTCAAACC
CTCCCTCCTCCTCCCGCCACCCTTCAACATTTTCCACACCCGAGCCCTCGCCGTACGACA
CCGTTGCTACCCATCCTCATCACCGGTCCCGATCCGCCGCCGTGATGTCTTCCAACCCAT
CTCCGACCGCCACGACGAAAACGCAATCCGCCCATCCGTCGGTGTCCTTTCCCCCACTTC
GTCTTGAAAGCTGGGGAACGTCGCCGACAGCGAGAGAGGGAGGTGAAGGCGTCAGCTTCT
GACATTGTCGAGGAGATGTCTCCCATGGCATGTCGGTCTCCCCGCACACCATTCATCCAA
GCAACGACGCGAGCGTACGAGCATGGGCACCGCCACCGCCCGGGGTGCACTCAACATGTT
CGACGGAATCACTGAACTAGACCGGGTACGTTTGCTCCTGTCCGATCAAATGTTCAATGT
TTTGCATGGGTTTAAGGGTACCATTTGAGGTATGTGGTGCGGCGCAACATATGAGGGATG
GACGAACGCTATCCACGTGTGTTCCCGGATGCGCCTGCGGGCGTATAGGGAGTCAGATTT
GTGATGTCCAGTTATAGATGCTCTTATATCATCTCCAATAGTCGGTCCATATGTAAAAAG
ACTTAACTTTTGGATCTTCACGAGCAAAAAATGCTACTCCAACACATGGTCCATATGTTA
AAAAATTTACATCACCGCCTCCCGGAGATGTAAAAATGAAAACTTTGTAATACAAATTTA
CATCACGAGATAGAACTAATGTAAAACCGCAACCACCCGCCAAACGACGAACTGCCAGTA
TATTCCCCTTCCTCCTCGTGATCGCCCGCTTGCGATCGAGCACCAGCCGCCGAAATTCCC
GCCGGCACAGCCCAAGTCGTTGTTGCCACCACCACCCCAAATCGCCGGCGTCGCCCTCCG
TACTAGCCCGGGTCGCCTTTCCATCTGGAGGGCATCTCGCAACCGCCCCGTCGCTGCCGT
TTTGCGAAGCAGCCGGGTCCGGCAACCCATATAGCTCTACTCCGTCGGCCGCCGTGCTCC
CTTAGCTTCTCCTCTGCGCTGTCGTCCGCAGTAAAGACCAATCCAACTGCCTGCCATCTT
CTTCCACCCCGCGCACAAGGTGTTCGATGGAATTCCCCAAGGTAAAAAATACGATGAAAC
TTGATGATTTAAATTGGGACTGGATAGAATGTTTGACGATGGTTGTCTGCATTGTAGATG
AGCTTGGTTGACTCCTCATTCGTGGACGATTCATCGTCGGATGAGGAATTTGATTTGCAT
GAAGAAGAGGACATTGCTATGCTAGTGGTCGCGCACAAGGGGAAGAAGCCAAAGCACGAT
GGTTCCATCGATGGTTGTGCGTTCATTCGGAGAGAACGGATTGATGCACACAAATGGTTG
ATGTGCAACTACTTTGGATCACCACATGTTTTCCCGGAGAATTAGTTTCGACGCCGTTTC
AGAATGTCGAAAGACTTGTCGTCCACATTTGCAATTCCGTGAAGCAGCGCAATCCAGCCT
TAGAGTAGAGAAGGAATTGTGCTAGGTTGCTTGGCCATAGCATTGAATAGAAGGTCACTG
CTGCTTTTGCACATGATGGTATATGGTGTTCCGGTAGATTACATTGATGGCAATTTGGCG
ATGGCAGAGAGTACTACTATCTTCTATGTCAAGCAATTTGCAATGACTATGGTAGAAGTG
TTTGGTCCACAGTACCTGAGAGCACCCAATTCTCAGGACACTCAGAGGCTTTTGGAGATG
AACACAGCTCGAGGGTTTCCAGGTATGCCCGGGTCTGTGGATTGCATGCATTGGAAATGG
AAGAACTACCCAAAAGCATGGCATGGACAATTCAAGAGTCCTGGGAAGGATGCCACTATC
ATTCTTGAGGCAATTGCCGATCATGAAACATGGATTTGGCATGCATATTTTGGGATGCCT
GGATCTTGCAACGACATTAATGTGCTTGACCGGTCACCTCTATTTGCCAAGCTAGCAAAT
GGAGAAGCACCACCAGTGACCTTCCAAGCAAATGGCCGCACAGACACCTATGTGTACTAT
CTTGCAGATGACATCTACCCAAGGTGGAGTACATTTGTCAAGTCGGTTGCAAAATCCGAA
GGTAAGAAAGAACACGTCTTTCACAATGCACAAGCAGGCGCTAGAAAAGATGTTGAGAGG
GCTTTCGGGATTTTGCAATCTCAATTTGCTATTGTGCGAGGACCATCAAGATTATGGGAT
CAAAAGATCCTTTGGTACATCATGACTGCTTGCGTGATTATGCACAATATTATCATTGAG
AACAAGAGTTGAAAACATTTAGATTACAACTTCTCTCACTTGGGGCATTCCTATTAATCC
CATACAAAAGGAACATCGCATCAGACGTTTCATGAAGGTGTATAGCGAGATTAGAGACAC
CGATGTGCATGATCAACTCCAGAAAGATTTAATGAAAGATCATTGGAAATGGCATGGCGA
AAGAGCAGCGTAGATTCATTATTTGTTTGTGAAAAACTATGTTGTATTGCGCAAAACTAT
GTTGTATTTGTGTTGCATCTGATCTCTGGGATTTGGAGAAATATGTAATAATTTGATATT
GTAACATGTATATTTTTTTATGTTGTTTTTATATTTTTTCTTGCAATATGTGCGGCTGTA
CAGTGGCTGATTGTAGCCGCGGGGCCACCGGCCCATTTTGCATCTTCGTTTAGGACCATC
TGTTGGAGTTGCTTTTTTTTACATCGCCATTTTAAACCATCTGTTGAAATTAAGTTTTTT
TCAAAAATGTAAAAAATCACTTTGTAGTGTTATAAATTTAGACCATCATCGATTTGAAGC
ATTAAAATATACATCATTTGTTGAAGATGTTCTTAGCATGTACTCCTTCCATCATGATTT
AGAAGTCGTGCTTAGAAATTCTATGAAACCTAGGTGGTTATTGATTGGATGTGACCTGTG
AGATGAGCTGAAAAATAATATTCACACTACACATGCATATAGAAGTACTACAACAAAATA
TTAATTAGCTGCTAGAAATAAATGCAATACGTCTTAAACCTTGTTTATTATAAAAATGCA
CGTAAATTTAACCGTACCTTCTAAAATGAAACTCCATGGACACTAGCACCCATGGTTTAT
TGATATAGAAGAAGCATCCCTCATGAGAATTCCAGAAATTCGTCTCTGACAGAGAATCGA
ACTCTGGTCGTTAGGTTTACAATCATGCGCCCCCAACCACTGGGCTATGCCCACGTCCTC
TAATTGTGCATTATTAGTGGTTGTTGTCGAAGAACCTACTGTTATGATGGACCGTGTTCG
AATTTCATATACTTCGTGCCACACATGTAGGAGCTGTTTGGTTTAAGGCCTCGCATACCG
TATTTTATCACACATTTTTGCCAAGCTTGCTTAAGATTGGTTCAATAAAATAAAAGTCAT
AAGTTGACAAGTCTAAGGGAACCTTGTCACAATTTTTTATGTGTATGTAGCTCTAGTATG
GCTTGACTAAGGTGTGGTTTGAACCAAACACACATCTAAGAGCATCTACGTCCCAGCTTA
GCAAATATGACCCCCAATAGCTACGTGAGTGATCGGGCGTGTTTGTTTTGAGCCCCTACC
TTTTTGTCCGTAAAGCCGTACTTTTTTTTCTTCATATGTCTAGTCACTTGCACGTGACTC
GTGGAGAAGAAGAGAGAGAAAGAAAAAAAGAAAGAAAGAGAAAAGATGGTCCGGGATGGA
GCCACGTCTTACGTGGCAGACTAGCCGGCGTGACCGGATGCATCCGTGAGCCCTCATACC
ATCCTCGTATTTCAGATGGATACGAAGGGTGTCGTTCAGTTCGATCATTTGAAACACGTA
TAAGAATCGGTTCTTTTGCTGTCTTTTAGAATAAGCTTAAATAAGCTGACCCCTATCCAG
CTTATTCTAGAAGCCCAACCAAAATTACCTTTAGAAGCCTACTAATTAAGACATAACTAG
TAGGCTTCTAAAAAAATATTTTTGGTTGAGCTTCTAGAATAAGCTGGGTAGGGGTAGCTT
ATGCTAGAAGCCCAAAAATGGTACAAAAAGAACTCGCCCTAAGGGGTCCGGTTGGGTCGT
GTTTTTGTGACCAATCACTGACCGGATGGCCTGCACGGTCGTTTAAGACGGGTATGAGGG
ACCCGTAGATGCTCTAAGTTGATCAAATTTGTCAAACCTTAGATGTGGCAACATTTGACA
AACTTAGGGGTTGCTTGGCCATCGTTTGCCATGCCAAAGTTTGGCAGTCGTACTTTAATT
AGTATGTGTTTGGTTTTTACCATAGTTTGTACCACATTTTATTGTTTATATGGCCTATTC
GTCATAGAGCCAATTTTTTGTCAACTTTTGCCGAAGTTTAGCTTTCAGGGATTGTTTGGA
TCGTGACTATCTTTGCCATATATTGTCACATTATTTTTGCCATATTTATCACACTTGCCT
TACTTGAATTGTTCAAATTGTTAGCCATATTTTGGCTTGCCTAAGGAAATCGTATCATAC
TTTTTGTGTCTACGACATGTGGGGTTTACTACTCATAATTTGGTTTGCCTTAGGTGTGGC
TAGAGCCAAAACACATACCTAACTTGACCAAAGTTGCCTAAGGTGATGCGTGGTAAAGTG
TGGCAAGGAGTGGCTGAGAACCAAACAACCCCTCAAATTTGCAGCCACACTTTATGATTG
GCCATATTTTTGTTTCTTGCCACACTTTGAGTTGGCAAAATTAGTCTCCAACCAAATAGA
CCCTTGTAACGACCAAGATGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGCATCTAAGCGTCTCGCAAACAGGTAGCACAACACATACATAATAATA
