Contig Data
morexGenes
Links



Map Locations of contig_226559 (1840 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_226559

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_32229 1 1072 bp MLOC_32229.1 Available Available LOC_Os01g08860.1, FRAME:-3, EVALUE:5e-60, 13101.m00941 protein hsp20/alpha crystallin family protein, putative, expressed





CDS Structure of MLOC_32229






Contig Sequence (1840 bp)

>contig_226559 1840 assembly3_WGSMorex_rbca.fasta
GTGTCCGACTCATATAAGAGCATCTTCTATGAAGATCTTTTATACGGATCCGTTTTAAAA
ATTGAAAAACCGGTTTTCAACTAGAGATGCTCTAAGAACATCAAGTAGAAACGAACACCT
AGGATTTTTTAATACAAAGTGTGGCCAAGGGATTCGCATGTTTTATTCAGAATTAACCGG
AGAACATCCCCATTACCATTAACGAAACATCAAACCATCACCACCTGCGCACGAACCGAC
ACGGCACACCCTCGTCTAGCAGACGAAACGAAAAGACTGACACTCCACCACTCATCACAG
CAAACACGCTACCGACTCATACTCTGCTTCGATTCGACGCGCACACCATGCATCTCATTT
TCAGGCGACCTGGACCTGGATGGTCTTGGGCTTCTTAGGCTCGGGCGGCGGCAGCTTCTC
GACGGTGACGGTGAGCACGCCATCGCGGCACGCGGCGGAGATCTTCTCCATGTCGGCGTT
CTCGGGGAGCACGAACTTGCGCATCATCTTGCCCATGCGGCGCTCCATCCGCACGTACCT
GGCGTCCTCCTTCTCCTCCCTCCGGCGCTCGCCGCTGATGACCAGCACCCGCTCGTCCTC
CACCTGCACCTTGATGTCGCCGGACCCGAGCCCCGGCATGTCCACCACGAACGCGTACGC
GCCTGGCAGCTCCTTCACGTCGGCAGGGGTGGCCGCCATGGCGCGCGCGTCGCGGACGTA
GGCGCGCGTCGGGCCCTGCTTCTCGCCGGCGGCGGCACCGGACTCACCGTCCGGGATGTC
CAGCAGGTGCTGCAGGGCTGTCATCATCGGGGCCTCCAAGCCGAACACCATGCCCGCCAT
TTCTCGCTGGCTGATCTCGAGCTCGATCGATCTCCTCCGGTTGGGCTGTTTTGGAGTTTG
GAAGTTTGGATTGCTTGTTGAATATTTGTGGAGTTTTCGGTGGTGATTCAATGGCGAGGA
GGAGGGATTTTATGTAGGTCGCCCCAGGGGGAGTCTGGAAGGTGATGGAAACTTCTGAAA
TGTGGTGGAACGAGCGCGGAGCAGGGCGGAGTCCTTCGGCCGCTGATGGGGAAACTTCTA
GAGGTTCCACCTTCGGAATTGTTTTGCGGTAGCCTTGGGCCCATATGTCATTCGGGGGCA
GCAGAGAGTGATTTTTTTTAGAATAGGCATAGAGAGATCGAAAATTGCAAAATGGTGCGT
GCGCATCTTGGTGCCTGTTTTCAAAAATCATTTTCTACAATATAAAAAAACTAATTTTTT
TATAGACACACACAAACATGTATGTTATGTATCTGTTTGTAAAATTTTAAATCGTTTTAC
TTCCACACATGGCATATAAAAAAATGATAGATATCTATTTATAAATGGGCTTCTTTTTTT
GTTATTGGTCAAAATTTTATTATTTTTGTACAGCTTATAAATTACATTTTTTAAAACAAA
ATTTCAGTAAGTCGTAATGAATACATAGAAGTTTTCATAGAATTATTTTTGAATTTTTTT
AAACTTTTAAATATGTTTTTGATTCTTTTCTAAAAAGGACACCAAGGTGTCCGGACACAC
AAACTTCGCTCCCATAGAAAGATGTTCTTTTTGAAGAAGACGCATAAAAAGATTTAAAAA
AAGATAACACCCATAGGTGTGGACGTTTGCATCTCGCCAACAAGCATGGATTGGCGTCCG
TTTTGTGGTTGCACTTGTTAGGAATTAATTAAATATATTTAATTAAGGGATAATCCCTGC
TATGTCGGTTGCTTTAGTTTAGCAACTGCTCCTTGTAACTGCCTTTGTACCGGGGTATAT
ATACCCACATCTTCAATCAATGAGACAGCGATTTCATCAT