morexGenes - Barley RNA-seq Database

Contig contig_225180

Source Contig contig_225180

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_225180 (1341 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_225180

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32089	2	1252 bp	MLOC_32089.2	Available	Available	None

CDS Structure of MLOC_32089

Contig Sequence (1341 bp)

>contig_225180 1341 assembly3_WGSMorex_rbca.fasta
ATGTGCAAAATGCTCGAAAATTTACGGAAGTAGTATCATTGGAAAGAGGGAAATTTTAGA
TGAATTTTGGAAGTACCCTGGATTTTAGAAAAAGAGAAATAGTATTGTGGGCCAGAACGA
GTCTGCCTGATTAAACAGTACTACACCCGGGAAGGGGGGTCGGCGTCGAAGTCATTAAGG
AGAAATACACCTTCACTTACGCGCCGATTTAAACCTGCATTGGGGCGATCACACAAGCCA
CACATGAGCAGCAAAACCAGAATAATCAAACAATATATAAAGTTCACAATCAGGCAATAA
CAAACAAGATTATATGGACAAACTAGAGGATATTACTTCAAGTGGCTGCGCCAAGGAAAC
CAGAATGCAGCTGAAGCAGGAGCAGGTAGCTTAATTCGGAGAGTTTTTTTTTTTGTGTGT
GTGGGGGGGGGCACTATTAGCAGGAGCAGGAATGGCAGTTGTTGTGGTAGACGCAGGTCC
GGCGGTGGATTGATCCTGGGACGCAGCAGGTGTTGTAACTTCAGTAGAATACGCTGTAGG
CTGCCCATAGCTACCAGTAGCATAACAATCACAGTATGACTGCTACTGGCCATAGCCTGG
CTGACTGTATCCATACTGCCCATAACCAGCCTGAGTGTGCCTGTCCATACGGAGCAGATG
AAGGCGGCTTCTGAGCATGCAGAGGCTACCCATAAGCACCCTGGCCATACGTGCCCAGTG
GTGGTGGCTGCATATCATAGACAGGCTGTGTCTGTGGAGCAATGTATCCATATTGAGGGG
CAAAACCTTGCGCCGTTTAGCTTGATGCAGCAGCACTAGTATAGGTGCTTGATTAGGATA
ACCCAGTTGGCCTCCAGTGGCTGGAGTTGAAGCTTGCTGCCCTGAAGATGCTTGACCAGC
TCCACCTGGACCACCGTAGCTCGGTGCAGTACCATACCCTTGTGAAGCATGAGTAGCAGG
CTGGCTGTAATTGTACCTGCTAGCACCAGCAGGCACAGCAGTTCCAGTGGCAGACTGTTG
TTGTTGGGATTGCTGCTGTTGGTTATAGTAGTCATAGCCAGTGCCAAGGGGAGCTGCTGT
GCCATAAGGTTGCTGGCCATACTATGGTGGTGCGCCAGGATAAGCTCCAGGCTGCATGTA
AACATGCTGTTGTGTTGCTGGTGCATCAGGCGCAGCCCAGTTTGCCTGAGGGCAGAGAGG
ATGGTAGCCCTGTTGGATTTCTGGCGCGATTCTGCAAAAATATAGTTTCACATCAGAATA
GGTATAGAACACAACATACAATGTACCATGCAGAACAAGTGCAAACCAGACAAAACATAT
CCAAAGACAAAACAATGTAAT