morexGenes - Barley RNA-seq Database

Contig contig_2251135

Source Contig contig_2251135

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2251135 (2831 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_2251135

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32084	1	2107 bp	AK377022	Available	Available	None

CDS Structure of MLOC_32084

Contig Sequence (2831 bp)

>contig_2251135 2831 assembly3_WGSMorex_rbca.fasta
ACTGGTATCGAGCATGTGTTTTTAAAAATAATTAACATTGCTAATTGATATTGGTTTCAA
AAAGATATTCATATTTTAAATATGTTCACTCTTTTTAAGCCCAAAAATTGTTCCAAATAA
AAAAATGTTAAATTTGTTCACAAAATCATGAAAAATTTATTAAAAAGCATGTCCTCATAA
AATATTCGGCACCAAAACATGTTCCAATTCTAATTAAAAAATAGTTTCTCAAAAAAAATG
TTTTCCTGAAAAGCAAAACATAAAACCGATTCACATACTATTTCATGAACCACTACTCTT
CCAACAAATGTAGGAAGTTAGACTAATTTCTTTATTTCATGAACCACTACTCTTCCAACA
AATGTAGGAAGTTAGACTAATTTCTTCACGTCCACACTTGATCTCCGAACAAGAATTAGA
GGGTAACCTTATTACCAATGTTTAAGAGTAGGTTATGTAATGTTTTTGCCAGAGTAGGTT
ATGTAATGTTTTCGCCCGTTGCAACTCACGGGCATTTGTACTTATCTTTTAAGGGGGAAA
CCTATTCTCCATATCGCAACATCAAAAAAATTAACTGATTGTGATAATACTAATAACCAG
TTTTATTTAAGAAAAACAAGAACGGTAAACAGGGTCAGGATACAAATATACCCTTATCAC
ACCCTGGGAACACATTATGCAAAAGCACTCATAAGCACCGTGCCATTGAGAGCCAAAACT
GAACGGACTGATCAAAGAATAAAGGGACACACGGATAAAAGAGAATAGGACAGCCCAAGA
GACACACCAGTTATTATCATAATCCTCGAGGTACTAAAGACAAGGACTGAGACATATGTT
TGCATCTCCCTCCACTTCCAGGTTCAAATATAGAAGGCCCACTTTCTGAGGTCATCTCCA
CATCTTCCTCATTGACATGGTGCCCCGCGAGAACCCCGTTGCCCCACACTTCATACAAAC
CTAACCTTGCAGTCACATTTAAATAAGCAGATATGCAAACTAAAAGATTTTTCCAGTTCA
ACATTTACCATGACAAGGAGGGATAACATATAACACACCATACAATAGGTAAACCATTTG
AGCAGACAAAGGAGGTAAAACTGCCAGGTTCCTCACAACACCTACCAATTTTCTTGTCAC
TACCATCTCTGGAATTATACTGATACAGGACAGACGAGTTGTTTCTACACCAAAGGGAAC
TACAAGAATCTTCTCCTCAAGAACCACCAGCACCTGGGCCATCACTGCCACCAGGCGGTT
TACGATTCAAATATCTTATAACAGCATCCTCAACCCTATTTCATAGTGGAATGAAAGAAA
GTGTAATCAGCATATGTACACACAACATGTGACAAATATAACAAATTTAAGTTACAAACA
TGAAAGCCTACGGGCACTGCTTAAGCTTACCATGGCTGGTTATAGAAGTCCGCACGTCTT
TCCCTTTCAATATTCCTACTCGCTTCACCAGCAACAAGCTTCAAATCTTTACTCTGGGAT
GCTATCAACGCATTAATGAACTCCACTGGGGACTGGCTGAACCCAAGGAAGAACGCCCTC
CTCCTACGATGCTCGTGGATCTTCTTGATTGAAGCAGATATCACCTCATCACATGCCTCA
ATGTCCTTGTGCTTCTCAGTATTGGCAAGAAATGCTGTCATCTCCTTCTGCAGTGGGAAA
GGAACATCTACCAATACATCATAACAGGCACTTGAGTTTGCTCCATTCCCTGATAGCTTG
ATCTTATGTTCCAAGTTGATGGGCGGTGGAGGAGCAAGATGTTGCGATATCTTCTGCGAC
AGCATAGCAAACCTCATTTTATCCTCCCCAAATACCTTCTTCAGTTGGGGGTCACACATA
AAGTACGAAGGGTCACTTGGATTCTGTAGCTTCTTTGCCTTGATGTACTGCCAAAGGGCT
GCGATCACCCTTGCGCGAGTGTCCACCTCAACCCCAAGCACCTCCATCAGTGGCTGTGAC
AGCTTGAACTTCTCCGGATTATAATTCATCTCCAGACGGATATTGGCAAGAAACTCCTTA
TCCCCTTTCCTCTTCACCTCAAACCCTTCCTGAGGCGCAGCAGACCGTGCATTCTCCCAA
ACGATCAGTGGGTTCTCTGGATAGAGTGAGGAGTCAAGAGCAATAGTCACCCTCTTAAAG
AACGAGGAGAATTTCGGATACACTGGGTTGTGCTTCGGTACGACACTGGCTGGGTCCAGC
TCCGCACCGTCTTCAAGCACACGGCCAATGATCTTGAGCGACCAGGTGGGCGGATCGCCA
TTCTTGGGCGGCGGGATGGTGCGGGGCGCCTGGTTGGCGAAGGTGTTGAAGACGTAGATG
CGGAGCGTGCGCTGGAGGGACGGTGGTGTCTTGAGCGCCTCCTGAATGTCCACCTTCTTG
CGCGCGAGCGCTGCGTCTACGCGGGCCTCGAACTCGAGGAGCTGCGTGTAGAGCGCGGAC
TCCGGTAACAGCGCGGCGACGCGGTCCGGGAGCTGCTTCTCCGGGAGTTTGCGCTTCTTG
TTGCGGCGAGCAGCAGGGGTGAGGTCGACGCTGCCGGAGTTAGCAGCCTTATAAGCGGCG
GCCATGGACGCTGCGGCGGCGTTGGATGTGGGTGCCGGCGGACGCGAAGGGGGCTTCTGA
GGAGGGCGCTTAGCCGATGCGGCGGCAGAGGCCGCGGCCGCGGCAGCCGCGGCCATTAGT
GGGGTCTGGGGGGAGGAGGATGCGCCCATGTGAATCTGAAAAGCAGGATTGTGGCTAGGC
GGGGTGTGGAAAAGACCCTGGAAGGGGGAACCGCCGGGGGGGGGGGGGCGCAGGTGGGGG
GGGGGGGGGGG