morexGenes - Barley RNA-seq Database

Contig contig_224394

Source Contig contig_224394

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_224394 (556 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_224394

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_32014	1	519 bp	MLOC_32014.1	Available	Available	LOC_Os01g11240.1, FRAME:+1, EVALUE:1e-30, 13101.m01212 protein DUF538 domain containing protein, putative, expressed

CDS Structure of MLOC_32014

Contig Sequence (556 bp)

>contig_224394 556 assembly3_WGSMorex_rbca.fasta
AAACACAAAATATCAACGAATTTGGTGGACGCAGCGGGAAAAAAAAGCTAAAAGCTAGGA
AGCATACACGACACAAAGATGCAAAATCCATCGTGTATGCAGAAGACATTGTACTTTTTT
TACGAGATCTGACAGAACCCGAAGCAGACGAGATCCAGCCTGACGAGCACCAGCAACGGA
TGAGGGCAGCAGCCGGTAGCAGCAGGTAGTAGCACGCCAGCAACATGTAGCAGCACACCA
AATACCCCAATATCAAAAAAGGTCCCAGCAACTCGAGCGCGTTGACTCCATCCAGAGTTG
AATCTGAGTTTACTTCGCGAGATTTGATTCAACCAATCGAGATGGCGCAGGCGATCGAGG
CTCAGAGGGAGGGCGTGGAGGTGTACCACGGCGCGGCGCTGTGTGCGGAGAAGGCGGTGG
AGCTGCTGGCCGAGACCAACATGCCGCTGGGCCTGCTGTCGCTGGCGGACATGGAGGAGG
TGGACTAGAACCGCGCCACCGACTTCGTCTGGCTGCGCCAGAAGAAAGCACTCGCGCACA
CCTTCAAGCAGATCGG