Contig Data
morexGenes
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Map Locations of contig_2239656 (1397 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2239656

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31972 1 924 bp MLOC_31972.1 Available Available LOC_Os01g40250.1, FRAME:+1, EVALUE:4e-86, 13101.m04117 protein down-regulated in metastasis family protein, expressed





CDS Structure of MLOC_31972






Contig Sequence (1397 bp)

>contig_2239656 1397 assembly3_WGSMorex_rbca.fasta
TTTAGGAACAGAGGGAGTAGATGTTACCATGTGTTTTTTTTACTAGCTGTTGCAGTGCTC
TTAATATTTTATTTCCAGAAATATCATCATGTTTTGCTATTGATGTTTTGCTATTGCATT
CTTTCTGTCTATATCTTGTCATGATTTTTTTACTAGCTGTTGTGGTTCTCTTGTTGTCAT
TTCACAGCTGGTGTAATACTATGTCTCTTCACAGAAAGCAAACCTTGTTCATGGCTAACT
TATATAATAGCAGAAACAGATACCCATACATTTTGTTGCTACCGTGACACTTCTTTACTT
GCAGGCGATATGGATGACAATTTGCAAGCTACTGATACATCCCCATTTTGAGTTACGCAA
TAATTCTAGCTCTCTGGTATCCAAGTATTTTGCTTCAGTAGAGAAGAGGAAACAAGAGAA
GTTGGATGTCACATCATCGTTCCTTGTCCAACCAAGCAGGCTATTCCTAATTGCTACTGC
TTTCTTGAAACAGCTGAGGATGGAGCTAAGTGATACTACGGAAAATAAGAAAATTGTACA
CAATCTTGCATACTCAATCTGTAACTTGCATGTGTTGGTTAAGCAAACTACTTCATCGCA
TAAGTTTTGGTCTAGCCTTGGTTCTTGTGATCATGGTGCCTTCCTCGAGGGTTTTGAATT
GCTTGGTTCAAGAAAAGCAAAGAACACGTTTCTCCTCTGCACTGCCTCTTGTAGTGATAT
AGCTGGATCTGGCCTTGACAGCTGTGAAGAACTTGCATCTTTCTTTGTTTCTTCTCTCCT
GAAGAAAATGGGAAAAATTGCAATGCAGATGGAGGACACACATGTAAGCACCATATCGTC
ATCACCTAAGTCAATAAGTCATTGACCATTGGAAATATTATTCCTGCGATTTCATATGAT
ATTTAATACTTGCTGTATATTTCTGTGTTTGCAGATGAAGATCGTGTTCAGTTGTTTCAG
TATGATTTCACTAAAACTAAAAACTGAAGCTGAATTTTCAACCTATGCTGTTCACATGTT
GGCCCCATTGTACAAAGTTGCTGAAGGATTTGCTGGGAAAGTCATCACTGGTATGATCCT
TTTCTTCTTCATATAAAAGGGGGGATGTTGCGTATTTTTGTACCAATTTCCTATGTTTCT
GTTCCCTTGGCTTTGGAATCCTGGACGCGAGGAGTAAAAATTCATTTTTATTTTATTTTT
TCTTACAAATTGGATTTGTTTCGTACATTTATCTATGAGAAAATCCTGGGGTCAGAATTC
TTTCCAATTTGAAAGTCCCAAATGATCCAAGGGAGCGGAAACAGAGGGATTCGAACCCTC
GGTACAAAAAAATTGTACAACGGATTAGCAATCCGCCGCTTTAGTCCACTCAGCCATCTC
TCCACGTTCCAAAGCGA