Contig Data
morexGenes
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Map Locations of contig_223675 (3106 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_223675

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31941 6 2668 bp MLOC_31941.2 Available Available LOC_Os07g23900.1, FRAME:+3, EVALUE:2e-64, 13107.m02356 protein OsFBX234 - F-box domain containing protein, expressed





CDS Structure of MLOC_31941






Contig Sequence (3106 bp)

>contig_223675 3106 assembly3_WGSMorex_rbca.fasta
CCGCCGCCGCTGCCGGACGAGCTCCTCGAGGAGGTCTTCTTCCGCCTCCCGCCGGACGAG
CCCGAGCACCTCCTTTGCGCCTCCCTCGTCAGCAAGGTCTGGCTCGCCCTCCTCTCCGAC
CCTTGCTTCCATGCTCGGTACCGCGACTTCCATGGAGCTCCCCCCATGCTGGGCTTCCTT
TGTTCCTCGCGCTCCATCTCCGAAGATAACGACCCGTACTTCTTCCCCACCACGAAATTC
CGTGCGCGCATTCCCGACGACGACTGGGAGAAGTTCCGCTACGCTGCGTGGGACTGCCGC
CATGGCCGCGTTCTCCTCGCCGATGACTGTTTCATCCCTGATTCCCTCGTCGTTTGGAAC
CCCATGACGGGCTGCCGGAGGGAGCTGGACCAGCCCGGCCATGTCGGCAGCATCTATGCG
GCAGTGGTGCTCTGTGCGGTGGCCGGCTGTGACCACCGTGCGTGCCACGCAGGCCCCTTC
CAGGTGGCCTTCATCGGTACGACTTATGATGATGGCGAATGCTTTGCAAGGGCATGCGTG
TCGATGCCGATGACGATGACGACTGATCGGAGCAAGCCGTGCTCTCATTCTGGTCTTGAT
AAGTGGGGCGAGCCGTGCTCTCCTCTTCATGTTGGTGACTACACTCCATTCTGGGACGAA
ATCGCCCCTGTCTTCCTGGAAGACGCACTTTACGTCAACCTCATGTATCAGCAAGATGAT
CACATAGAAATTCTCAAGTACGACTTGGGATCTAACTGCTTATCGCTGATTCATGCACCG
TTGGCTGGGTCTATCCGTCACAATGCCGCTATCCTCATGGCCATGGAGGATGGCAGTCTG
GGGTTTGCACATGTGGACCAGGTAACCCTCCAATTGTGGTCAAGACATGGAGATTCTGAC
GGAATTGGGTCATGGACTCAGCGTACTATCATCCATCTTAATAACCATCTCCCCCTTCAA
ATTCCCAATAAAAGACTTAGACTGATTGGATCTCTGGAGGGCGGTGATACCATTTTCGTG
AACACGGGCCTTGACAACTACGAGCTTAATCTCAAGACATTACGGTGGAAGACAATACAG
AAGAGAGAAAAGCTTTATGTTTTGATTCCGTACATGAGTTTCTACAATCCACAAGGTATA
TTTGTATTTGTATATGTTCTCTCAGTTTTGATTCGGGAACAACTCTTATGGGATACTCCA
TATTAGTTAGTGGGACAAACAAAACACTTAATGCATAATCAAATTGAAAGTTATATTTGA
AATATGCCTGCAAATTCTGAGTGCTATGTAATTACGACTAATTATGCTTACTAATTTGGC
AATTTATATAATATCATGTCATCTCCTTTTTGGAATTACACCGACAAACGACTTCGCTTG
CAGAAAAAGTGATCACTGGTGATGTGGCGCACTGACAATGTATGGTTGAGTATGCTTGGG
GTAGGAGGCCACTTTCATCAAGAAGAAATTCGAGGCTAGAAGGGTAATCGCTATTTAGTA
GTTGGTTTTGTGCACCGGTGCTTGTTTTTCATACTGTTGTTGGCTTTGGCCACTAAGCTT
ATAATTTCCCCGTGAGTAGCAATGTGTAAGCGAATGAATGAGTTATCTTGTAATGAACCA
TCAGTTTCTTGCGGCGTCAGCTATGTGCTCTCTTTTTAGTAGCCATGTACTGTACATTTT
GCTGTCCCAACTCTGATCCATAATTTATATTCATCTCAAAAGATGTTCCATTGAAGAGAA
CATGCGCAAGAGATGATACGATGATGATTTCTGCATGTTGGCATGCTGATGTGCCCTAAT
TAATCTTGTAGATTTAGTTAGTGTTGATGATCAGATGTTGATGACTGACCACCCTCAGGG
AGCTACCATTAAAACCCGCTTCAACGTTGCAGATTTTAAGTTTGTTGCAGATGCTCCTGG
AAGAATTTCTCTCTGCAACCTGGTGTAGGCTAGCAATCAGCATTTGCAGAGAGCAGGGTG
ATCATAGGATCAACATCATGATCATATGGCAAGTTGTGCTTCTGTCAGGTCTCCTCTTCA
GGCAGAAGCAAAAGCTCTTCTCATTCCAACTGAGGTTGCAAAATTAATTCAGATTCAGTA
GGCAACAGATAACTATCCAACTGACGAAGATGATAGTGGTGGTTCAGAAAAATATAGACA
GTAGCGAGTGAATTGGTTTTCTTCTAATGAACCTCTATGTTCTTGCAGCATGAGAGATGT
GCTCTGTTGTTTCTGTAGACAGTAGCTTAGTCTTACCCTTTTCTAAACTATACTATTTGC
TCTCCCAGCTCTGATGCATTCTTTAAATTCATCTCAAAGGATGTCCATTGCTGAGCTGAG
GAGATGATGAAAGTATATCCAGGGTTAGTTGTTCTGTCATCCAAGAATTGATATAATGAT
GGTTTCTGCATGCTGGTCTGCTGATGTATCCTAGTTAATCTTGTGTGGCTTTAATTAGTG
TTATCTGTCACCCTAAAAAACATTAGTGCTATCTGTCAAGTGCTGATGTCACTGCAGTAG
TTTTTTTTTAGAAAGCAATGTTGCTGAAGAGCATAGCAATGAAACTGAATTTGTAGTCAA
AAGAGCATAGCATGGAAACTGAATTTGTAGTCAACGGTGTAAGATCTCATACATGTTTTT
GTTGCTTCAGCAGGTCGACAAAACTGTCAGTTACTTGTTGAATACTTTTGGCCATGTAGA
GTGGAATAATAGTAGACTGCGATGCCCATGTAGGAGGATGGAGATATTCATACTATGTTA
TTATGCAGTGATCAGCAATTCAGCATTGGAGACAGGTGCCGCTGGGCAGCAAGATTAACT
GGCAGGAGCAATGATAGATGTTGATAATTGATCCCCTCTGGGAGCCACCCATTCAAATTT
TAAAACTACAGGATCTACATTTTAAAACTATGTTATTACATTGCAGGTTTAAGTTTGTTT
TCTTCTTTTGCACATGCCTCTCCGAACTTGCTGCATGCATTGGAATCTACATTTGCAGAG
AACATGACAGGATCTAACATCATGATCATTGGAAGCTATGTTTTGCTGCCGGCTCTCCTC
GTAATGCACTTCAGCTGTCCATTATGATCAGCTGACTTGAACATAA