Contig Data
morexGenes
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Map Locations of contig_222514 (4929 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_222514

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31807 1 680 bp MLOC_31807.1 Available Available LOC_Os01g45640.1, FRAME:-2, EVALUE:3e-31, 13101.m04683 protein tat pathway signal sequence family protein, expressed





CDS Structure of MLOC_31807






Contig Sequence (4929 bp)

>contig_222514 4929 assembly3_WGSMorex_rbca.fasta
GGCAAAAACTAACTTATGTTTGGTTATAAGCAAATCACTTTTGTGATGGAAAGACTTTTG
TAATGGATGTAAGCAAAGTTTTCTCGTGTTGGAAACATAATAAAAATTTATGGGAGTCAA
TTTCATTCCATGTGAAAAAAAAGTCTGAGAAGCAAAAAAATTATATGTGGAAGCAAGGTT
CTTGGACATTTTTTTGTAAGATTGCAGTAGAAACAAATTGGGACGTTAGTGGAAGCAAAT
TTTGGTGTGTTGGGAATAAAATAAAGGCACACTCGATACAAGTTTTCGTGTTTTCATCCG
AATAATTTAAAGATTATTAGTATAAAAAATGAAATTAAATAGAAAGTATGAAATATTACT
ATCACATCCTCGCTTGATTGAACGATGGAAGGAGATGCAGATGCAGCTTGGTTCTAAGAA
GCAAGGCTGGTACGAATTAACTCGCTAGGACAACGGAACAGTTAGAGGAATCATCGTATT
TAAAGAAGGAGTTACCAAATCTAGTAAACTACCTAATGTACCTTTCTACACAGGATCTAA
CGGCTCGTGTGCTACTAATCCAACAGCCACAGACTAGTCTGATGAAACGCTAGGGATCAG
TAGTCTGATCCCTAGTGGCTGTCTTAATTCAGTGTTGACGAGCTTGCCAACGTTTCTTTT
ATGTTTCTTCGAAGTGTTGGTTGGGGTACAAAAATGATTACATTTCTATCGTTCTCGATT
CTTCTGGCAAAGTGATAATACCAAGAATAAGTACAGGCTTGCCAAATTGGATATTATATG
TAGACCCAAAGACCAAGGCGGGTTACGGATTGAGAACTTAGAAATTTAAAATAGATGCCT
TCTTAGTAAATGGATCTTCATAATGTGTGTTGAGACGGAATGTACGCGGTTACAAATTCT
TCGTAATAAGTACCTACAATCTAAGACTTCGGCTCAGGTTAGAGCTAGACCTTGTGACTC
ACCTTTTTGGAAAGGGTTAATGAAGATGAAAGATACTCTTTTTCACACGGTGAAATTTCA
TGTTGGTAATGGTAACACTACTAGGTTTTGGGAAGATACATGGTTAGGGGAGACACCCTT
GGTTGTACTGTATCCTTCTCTCTATAATATTGTGTAACGTAAGGAAGATTATTTTGCTAC
AGTATTACGTACGGTTCCCTTGAATATACAATTCAGAAGGTCCATTATGGAGAACGATCA
AATTCATGGTTGCACTTAGTCCGTAGATTGATGAAGGTTCAACTAACAGACCAGCCACAT
GATATTCAATAGAAATTAACAGCGAATGGTAGTTCCTCTATGAAAACAATGTATTTAGAC
CTAATTGATTATAGGCCGTTACCGACATGCTTGCACATCTGGAAGGTTAAATTCCACTTA
GAATTAATATATTTATATGATTCGTTCATAAGAAAGTGATTTTGATGAATGGTAATTTGA
TTAAACGAAGATGGGTAGGAAGAGTACGAGATGTTGTGTTTGTGATGAGAACGAAGCTAT
TAAACAGATCTTTCTCGATTGTCCGCGGACCAACTACTTTGACGTACTTTACATATGGTC
TTTAACGTTGGCCCTTCAATTAATATGAACACGTTATTTGAGACGTGACTTAATGGAATG
GAAACAAATATAGCGAGTCATATTCGGATAGAGATATGTGCTTTATTCTGGGCTATACGA
AACAATAGAAATGATATAACATTTAATAGAAAAAAATGTTAGTAACTTTTTGCAGGTTAT
ATGGGATTGACATGAATCCGTACGTGATCGTTACTCATATCTACGAAGTCCAAAAAACTT
TTTTGGTTACTCGCTGCAACCGGTAAGACACAGGCAGCAGAGAATATCATCAACCGGTTT
AAATGACGGCTAACTAATAGACTAGGTGTTTAGTCATCCTAACCAGTTTTTTTAGCCAGA
TTTGGCATTTATTTTACTTTTCCTTTTATGAGCTATTTCTGTTAGCTCTTGTTGGATATT
GCACTTTTGTGAAATCTTTTATTACTTAATAAAATGGTTGCATGCATCATCATCATGATG
AGGTCGGGGGTGATTCTCCTTTCCCAAAAAAAAAAAGATTTTGGTTTGTGCTTGTAGAAT
AGAAACTGAATCAACTCCATGTCTATTGGGTTTTGTCCATGTATGTATCAAGGGAGTACA
ATATAGCCATGAAAACAATGCAGTGAAGACACAGGAAAGTTATTTTGCAAGGTTGTCTGG
TCTCAATTGTTACTAGTACATTCAGAAGTGTTAAGTAGCACCGGGCGAAGCTACATGCAC
CGGGCTGCCTTTTTTTACATTTAGAAGTGTTAAGTAGCATTTAGCATAAACATAAAAATT
AACGAGACGATGCCTTTCAGATGTAAGCATCGACCAAAGTAGGAGGGATTAGCAAGTTCG
CCACAGACTCCTTACTCGTGTTCTCTTTCTTCTCCATTGAGCCTAGTGCCTCCTCCCGGA
TCTTCTCCAGCTTCTCCATTACTTTCCTCTTGTTCTCTTGTTTGGAGGTTCTTGCTTCAG
CACGTTCAGCCACCATGAACATTGCAAACAAAGCAGACGAAATGTATGCCACGGTACCTC
TACGAGATGTCCTGCTTGCTTCTTGGACAATGGTTGACTGCAGAAAAAATGATAAACTGA
TAAGTGAAAGGGGTAGTTCAAGCCTCGACAGAGGTTAGTAATAATTAACTCACGCATGAA
AGTAACAACATTACATGATGACTCTGTCTACAAGAGGTAATGGCTTCAGTCCAAGCGTGA
TTAGATGACATGACTAGTATCGAAGTTTTGATGCTTTATATGAGTATATACAGTATCAGT
TGATGCACGTAGCAACAAATGTATGACTTACATGAAAACTTGAACAGTGAAGACTTCATT
CACACTACACTCAAATGAATACGCACCATACATTTAGTCAAATGTAGTAGATAAGGTAAC
CAGTACTTCAACTAAGTGTCATGGAGTACTGTCCCCAAATGTTGGCGAGTACCATGACAT
TAAGAATATAATCCTAATCTATAAATGTTGTAATTTCATTTATAACTAATAAGGGCAACT
CCAGTGCGGTTGTGAAAAAAAGAACGGTTACTCTATCCTCATCTCTTCTTATCAGTCACT
GCCATAAATCCTAAATTCCTAATATCACAAGCAGATGCAAAAAGAGTAAGACAGCGACTC
AGGCAACGGCAGGGTACTCTGACATGTTCGATGAAGGAAGGTCGAACAAGTTCCTGAACA
TCAATTTACAAATCCTAATAACTTGGCTGCTGAAGGACAGCATGGATAAAATAGTCTGAC
AAAAGATCTTCACTCATACGATGTTCAACCATGCACCAAGCCACCAACCAATATGGAAAG
CACATACATGATTTACAATCTCTTACCACCAAGCCACTCATTCAGCCTTCCAAAACAAAA
ACACGGGATCCAGTACAGAAACTTCTAAGATGTTCCATCCCTTTGCTCACTCGACAGCAC
GCTACTCATATCCCTGTTCTGATATTTGTAGAGATCTAAAATTACTGTAAGCGGCAGCCA
ATCAACCGAGGCGTACAAAAGAGACACACCCGATCTAGCAAGAGGCTACTGCTAACACAT
CCAATCATTCAGAACAGAATAATTCTCGAGAGCCGCAAAAATGATTCCCCAAAATCAGTA
CCTGGTTATGTTTACAGCTAACAAGAGTAGCGCGCGGCCTTGTGCGGGTGCAGCCATTTC
TAGCAGGAGTAAGCCAGTGGATCGGAGAGGGCAGCTGCAGAGAAGTGACGGCCATTGTTG
TTCCTAGATGAGAACCGAGAAGCTTGCGTTGGGTACTGGTGGTAGTGCCGTAGAAGGCAA
GTGCAAGTGCCTCCTCGGTAGCTCTCTTGACTCTTCTCAAGTCTCGACACTTCCACTGGC
TGACACAAGCACATTTGTCAAATAAGACCCTGCACTCTGGCGCGCCCCTCCCCTCGCTCT
GGCGACCTAGCCCTTCCTTCTCCACCTCTCCCTCACCCCTCCCTTCTCACCATCACCGTC
GGCTCCCGCTGACGGGCCTGGCCCAGGCGACGCTGGCGGCGGCGGCCCCTGGTCATTCCC
TTCTCGGTTGCTTCCGGCGTCGGGGCGTGTTCCTAGACAGCGACGGTGTATCCTAATGCG
GCGTGGAAGATCTGTTGTGTGGTGTTGTCGTCGTTGGCGGTGGGGTGGCGCGGCGACGTG
GTGTGGGGCGCCCTCTTGGTCCACATCTGGGCCCTTTGGGTCCCATCTGGGTCTGGACGG
GCCGACAATGGGTGGGTCTACGGCGTGGCTTTCGGGAGATGGGGGAACGACGATGGGCAG
TGGGTGATGGCGGCGCTGGGGCCGCCCTGCTACAGCGTGGCCGACAGGGGCTTAGCGGGC
CTAATTCGGGCCTCATCGGGTTATGGGTGGTCTGGTATGCCCTGCTGCGTCCGGACGGCG
ACCGCGAGGTTGCCGGAGGCCCGGCGGTGGAGGTGGTTCCCTCCCACGCGACTACGGTGT
TGTTGCTCCCGTCGCCCAACGCTTCTCTATTTGTCCTCTTGGCCTCGTGGTGGTGATTTC
ACTAAGGCGACATAGGTGGCGTCGCGACCGTGGTGGCGCATGCTGGTGGGCGGCGAGTTG
GCCGGTTGGCTCTGGTCCGGTTGGACGATGGGATTTGGAGTGCAGGAAAAATCCTTGCCA
ATTCTTTTGACTCGATGCAGTGACGCCTGCGGGTGCCACCATTCCTTTGTGGAGGGCGTC
GGTGCACTAAAGACCGGGGTCTCCAGTGCCTCGGACTAGTGCGCGTAGGGCGGAAGCAAG
GCTCGGAAACCCACCAAGTGCAGACTGCAAGCCCCCCGGCAAGCGCCCGCTTGTCAGGAA
TGAAGAAGAGACCCCGCCAAGAGCTCCCTGCCGGGAAGATAGACACTGCCAAGGCGAGAC
CCTCCCGCC