Contig Data
morexGenes
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Map Locations of contig_221288 (770 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_221288

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31680 2 708 bp MLOC_31680.1 Available Available LOC_Os01g67054.2, FRAME:-3, EVALUE:5e-26, 13101.m07271 protein calreticulin precursor protein, putative, expressed





CDS Structure of MLOC_31680






Contig Sequence (770 bp)

>contig_221288 770 assembly3_WGSMorex_rbca.fasta
CACGGGACAGAAGTAGGCAATAACATCCCTGTATGGAGTGTCTCCGCTATATTTCTTNNN
NTTGACATAACCAGACATTAGCTTAATATAGCCGCCGCCACACTCAATTTCCTGCTCAAA
CTTTATGGAGTACTGGACCACGAATGTTCGGCCCTTATTACTGAACTCCGGTATCTTGGC
TGAGATAGCAAAATGCCTAGCATCTATCGTTGTTTGAATGCCTGGAATACGCGAATAGAA
TACAGGGATTAGACGGTATGTAGAATTAAGGTAGCGACAAACAAGAGTTTATTTGATTAG
CGCCCAAACCATCAACATCATCAATTGAACAAGTACTACTAAGGGATGAGAAGGCAAACC
CCGGAGGCGAGCAGGAGCAGCGAGGAGAGCGTGAGGAGGCGGTGCAGGAGCTGGCGGTCG
CCCCGCCGGCGGCTGCTACCCATCACCGGTGGGTGGCTCACCGAAGACGAGGAGTAGGTG
GTGGCTGCTGCTGCTTCTGTCGGGCTTTCCATCGCCAACTGTCTATGTATAAGTCAGGGC
TTCTAAGGTCGTTATAAAACAATATAAATTTCAGAACCAAAACAATGCATGACCCATCAG
ATATTACAAGAACCAGATCAGTTAAAGAGAAAAGGGCATGGAATCCTAAGCTCGAGAGAA
AATTCCAGTATAAACTGTAGGTACCACAAACTCAACCAATATAAATTTCAGAACCAAAAC
AATGCATGACCCATCAGATATTATAAGCACCAGATCAGTTAAAGAGAAAA