| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_221143
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_31664 |
1 |
1128 bp |
None |
Available |
Available |
LOC_Os02g15610.1, FRAME:+1, EVALUE:5e-15, 13102.m01741 protein 40S ribosomal protein S15a, putative, expressed |
| MLOC_31665 |
2 |
796 bp |
MLOC_31665.2 |
Available |
Available |
LOC_Os05g15630.1, FRAME:-3, EVALUE:8e-31, 13105.m01647 protein membrane associated DUF588 domain containing protein, putative, expressed |
CDS Structure of MLOC_31664
CDS Structure of MLOC_31665
Contig Sequence (6360 bp)
>contig_221143 6360 assembly3_WGSMorex_rbca.fasta
TCTAGAAATGAATGTATCAAAATACTAAAACGTGACTAGATACATTCACATCTAGACAAA
TCTAAGACAAAAATTTTGGGATGGAGGGAGTATTCATCAGTGTTCAAGAAAGCGTTTTTA
AGCGATGCTTAAGCGCTGAGCGATGGCAAAACACTCCGCTTTTGCCCTAAGCGGTAGATT
AAGAGTTTTTTTTTTAAAATTGGCCAAAATTTGGATGTTTTTCAACTACTGCTGCTTGTC
TGCTTGTGCAATAATGGCAATATGCCATTTATCTTATTATTAGGCTTTGTTTGGAAACTA
TTTCCTTCATATTCTGGCCACGTGATCTCTATTTGCTTATGTCTATTTGAACTGAACTCC
ATTTTAGTTGTTATTTTGCTTGCTATGTGAACCTGATGTGTATTTGCTATTGTGTGAACT
GAATTTTAGATGCCATTTCAATTACTCATGTGCCATGTTTCCTATTTTTGTGAGTATATT
ATTCAAAATCTGCCAAATTCTAGTCAATTTCAAAAAACGCTTAAGCGCGGTTAAGCTACG
CTTAAGCGCCCATTGCTCTAAGCTGTGGCCTTCCGCTTTCCGCTTTTTTGAACATTGCTA
TTCATTTATTTTATAGAGTTGGTGTGTTATATCTAACAGACAAACTCATTTCCTTTTCGT
GCTCTTATTTGCTTTGCAGTGGGGCTATGTTGTGGTGACCACCCCAAATGGTGTTTTAGA
TCACGAGGAAGCAATTAGGCAGAATGTAGGGGGCCAGGTCCTTGGTTACTTCCATTGAGA
AGGAAACAGAGTCATCACATGCTGAATCAGCCCTGGGTTGCGTTGTTATCTTTCTGTTAT
GACTGAAGTCATTTTATTTGGACATTTAGAGCTCGCTGCTTTTGTTCATGGCCACAGAAA
ATGCGATTACATGTCAAAAGTATGTCTCGTGACAATAACATAAATATTGTAATCCTTGTA
TGGGAGAGATATTTCTGTAGGTGTAATACACCCATGTACTTTGAGATACATGAGTAACGC
TCTATTTCAAGCATCCATGATCTTGCTGAGAACCTTGTCACAACCACTTTTCGTAAATCT
TACATGTACCGAGGATTTAAACACACTGTTAATTTGGGGTATGTTTATGTTCTTTCTTGA
GGCAGTATTGGTCATTATTGTTGCAAGATTATGCAATTTGATATACTGGTTGTTCATATA
TGTTCATGCACATGCATGTAGTGTAGGTGATGAGTTGTTAGCAACCCCCAGGATCTTGTT
TCTGCTAGAACATGATGCATCACAAAAACTGGACGTTCAACAATACTTAACTCACTATAA
TAACTACTTAACTTGGACACCTTATGATTTGGAACCTTCTGTTTTATTATATTTACTGTC
AAGAGTGAATTTCAATTTTACTCTGTAGTTGTACATTTGTGACATAGATTACCCCATTTA
GTCGAACTTCTATCGAAATATCAGTTTTGAAGACTTTGTACCCTGATTTGCATTTTGCTT
GTTTATGTTAGATAGGTTCGGCATGTTGTCTCAGTCATTCATAAAAAAATATGTAAAGAT
CAGAGGAAATAATTAACTGGACGTTTAACAATACTTAACTCACAGTCATTCAAGACACAT
TCTTTGTCCCATGGATTACGGCACATTTGTTTACTTATTTCACAGAATTATCTTCAAATT
AATTTACATAGTCAGGTCGATGAAGCTTTAGTTGTACCAAAGCAATAGCATCATTTCAAG
TCTAAAAATTTGCAAGTAATTTCACAGTATCACAAACTGCGTCACTGAGAGCGCGCGTAT
TAGAATTTATTCTCTTCATTCACGCAAGAAAATCAGCGGCAAATGGCACAAAAAGGTAAC
ACGCCCTAGGTGTTCATGGTGTAAATGGAATGGAGAACGACGAGTAAGTGGAGGACGACC
GCAACGAAGCCACATGCGAGAGCCCCCGTGACATGGTCGCAGAAGGTGCGTACTAGCCCG
CAGATCGGCTGCCAGCCGGCGTGGCTGTTCCCGTTCTTCCCGAGGGCAGATATGGCAGCC
GCTGCCGCCGCGGCGCCGGTGAGCACCATGCCGAGCACCTGCAGCTCATGACAACACGTT
CAGCAAGAATGGCCTAATCAGAGACGTGGGCCTATTGGCCGGGCAGGGGCAGTGTGGTGC
GCCATGAACTCACCGCGTCGGCCACGAGGACGTGCCTCGCGGCGGGGCTCGCCGGCGGCA
CGAGGATGGCGAGGAGGCTGTAGGCGCACGCGACGACGTTGGCGGCCACGAAGAACCTGC
AGGGCACGCACGGGCGCGGCGTTTCGTTCGTTCTCAGTGACACAGCCGGCACGATGATAC
GGAAACGGCTGGGAGCAGCAGCTGTATAGATACTTACACGAAGGACGGCGTGTATTGGAA
CTTGGCCTGCACCTGTACGCCGAAGACGGTGGTCGTCTTGTGGCTGGTGGCCATGACTAT
CGCCGCGACGCCGGCGGCCGCCGCCGGTGTGATCCTGAGCGCGAGGACGACGAACCGTCG
TGCTTTCGCCATGGTTGTCTATGCACTATGCTGACCGCTTGTGTTTATGCTGAAATATGT
TCGGTAGAACGCGGTGTCATGCACGGAGCAGCTTGTAGAAGGGTGGGAATTGAATACGTG
TGTGCGACTAGGTGTGATTTGTGATGAATTATATACTACGTTTCAGTCAATGCAGTCGTT
ATTATCTTAAATTATGAAGTCGATGGACTACCTTGTTTCTTGGGACTTGAACTCAATATA
AATCTCAAGAATGATGGGGAAGAGAATCGGGGTTGTAATTGTGCAAAGATAACCAACCAG
GAGCAAAAACCGTGCTTACTTGCATCTAAAGAAAGAGTGAGGTGTCGTAGACCCGTCATC
GCGGAATAGCACTAGTAATTACTTCCTCTGTAAACTAATACTATAAAAATGTTTAGATTA
TTAAAATAATGTTTTTAATGTTTTTATATTAATTTATGGAGGGAGTACTATTTATATGAC
GAAAACGTGAACACCCCTCCGCCTCTGCATGTAGTAACGCACATAACATTTTATTGATTA
TTTCAGAGTTCAATATTTAATCACAATAATTGCCGCACATAGCTGCCCAGGGGCAAATAA
AAAAGCAACAATAGAAAAATAAGTATCATGCTTCCTTCCTTCCTAAATACTCCCTCTATT
CATATGTGTAGGGCCTAATGCGTTTTTCGGAGCCAACTTTGATCATATGTTAGAGTAACA
ATATATGGCATGCAAGTTACACAAAGTATATCTTNNNNNNNNTACGTGAAAGGAGTTTTC
AATAATATAATTTTCACATTATACATTTCATATACTATTAATCTTATCAATAGTCAAACA
CAATCTCGAAAAATGCATTAGGCCCTATATATATGGACGGAGGGCGTACAAGTTTTTATA
GAATTTCACTAATGACTACATGCAGATGCATACAGAAATGTTTTGAAGTGTAGATTAATT
CGTTTTTCTCCGTATGTAGTCCATAGTAAAAGCAGAAGAACTTTTGATACCTGGGTGTAT
ATACACCCTATATGCAAAAATAAAGTAACAATCCAACAAGAAGTCAAAAAAATCTGAAAA
TATTTTTGAAATAAACTTGACCTTTCATTGTACTTACAAGAAAAAATCCGAAAAAGAAAA
TTACACTTTGACTTCTTTTCAGAAAACACAATTTTTTGATCAAAATAGTGTGAATAATGA
CCTATAATAGCAAATAAATTTTATCTTTTTTGCCCAGAAGTCAATGTTGACTTTTTTTAT
GAAAATTTATATACTAGTGCAAAACAAAATCAAATTTAATCTCAAAATACTTTGAAACTA
ATTTAACTTTTCAATTAATTATTAAAAGATTTCTTGATATGATGCATATATAACGAGGAA
CCAAAGTGTATTTTCCATAGTAAAATCGCTACAAAGACCTATATATGGGAACGAAAGAAG
TATATCACAAATCCTACTAGTAGCCCACCAACCAAATTGGTTGAACAAATGCCAAGAGAC
CATCCTCAATCGGTTGCACCCAAAGACCGTAGGCTCCCTATCCACCTTCTAGCATAGTAA
CGACCACATATAGAATCATCTGAGGACCATAAAGATAATCCATAAAAAATTAGAACTTTT
CTTCTCTTAAAAATACAATCATTACAAGTGTTTCAAATGGCCCAAAGTAAAGCCCAAATT
TCCATACGGGTCTCAGACTTCGACTTGGGATGCACTCTCACTAACCAATTTTCGAACATA
TTCGTACAACTCATGGGTGGAGGTAGATTAGAAGCTATATGGACAAATCACCATAATAGG
TGACAAGCGGATAGTGAAGGAATACACGTTGAGTCGACTCCTCACTATAAAATAACACTT
ATTTTCACCACAAAAGCAACACTCTGTGCAAGTGCAGCTTTGCCAATCTTTTTTTCCAGA
TTATCTTTTGTTGGGATGACCTTGCGATACCACATAAGGACTTTTATTTTCAACTTGACT
TCCATTTTCTAAATACATTTGTGGTTGAAAAGTTGTCCATGATTGATGTGGTTTGTATAC
ATGGATTTGACTATGAAGACATCAAACGTAGTCATCATTCAACGGAATGTGTCCGATTCA
TGTGGAAGGTTGACCATCATCAACCTTTCAACTAGATTTAATCGGATCGTCAATTTCCTC
GGTCAGTGGCCTTTTGAAGGAAAAATTCAACCGTACATGGCCCATTACAGGGGTGACAAA
GACATCTTTTCGCAGCACAATATCATAGAGGCAAGGGTATTACATGGTTGGTGACATGTC
TCCTAGCCATGTATCTTCCCATAACCTATTAGATAGGCCATTGCCTAGGACAAATGCCCC
CGTAAAAAATCATTTTTGACCCCCATTAGGCCTTTCCAGAAAGGTGAGTCAATTGGTTTT
CTGTGAACCTCAAAGGGGATTTAGAATGAAGGTATTTATTCCTAAGCAATTCTTGTCAAA
CTTCGTCCTCGCTAAGTATCTTTTATAGATAGTTGCTCAACAGACACTTTTTAATCTCGA
AGTCTTCACCCCCTTGGTCTTTAGGACAACATATGGCATCCCACCAAATTGGACGACATT
TACGCAAAATCTTCATCGGATTACCATAAAAACCTAGATTTGTTGTAATCCAATCTTTTA
CTTACCCCTTTAGGTATTTCAAAGAAAGATAACATGAACATCGGTAAACTTGTGAGAACA
ACATTGATGAGGGCGAGGCTTTCCCCATAAGACATATGCTTATCAATAAAAAACTCAATA
TGTTCTCAAATCAATCCTTAATATCATTCCATTCTTTATTAAGAAGTTTATGGAAATGCA
TTAGGATACCAAGATAGCTAAACGAGAAAGAGCCTGACTCACAACCAAACAGTCGTGTGT
ACCATTTCTATTCTTATTTGGCATTTCTGAAGTACAAGAGTTCACTCTTGTGGAATTTAA
TCTTGAGACCATATAACTACTCAAATAAACAAAGAGTAAGTTTCATACTTTTTGCATCTT
CAAAGTCATGTTCCATGAAGATAATAGTGTCGCCGACACACTGAAGTATGGAAGCCCTGT
CATCGACAAGATGAGGAATTAAGCCTGCAACATGACCTTATTATTAGCTCGCCTAATGAC
CACCGCTAGAAGATCTGCCACAATGTTGAATGGAATAAGTGAGAAAGGGTCTCCCTGCTA
CAAGCCTTTTTGATTTTGGAAATAGCGACCAATGTCATTATTTACCTTGACACCCACACT
GCCACCTATGACAAATGAGTCAATCCATTGTCACCATTTTATCAGGAAGCCATTCATGCG
CATACATTGTTGCAAGAATGTCCATTTAACTTTCTCGTAGGATTTTTAAATATTCACTAT
GAAGATAACTCCATCAAATTTCTTCAAGTGTAGCTCATGAATCGCTTCATGTAAGACAAG
AGTATGTCCCCGATTCTCACATGCACCCTTTGGTCCGGCTCCCATTGGTTTGTGTCCACC
GCATCCATGGCCCCCTTTTATGGCTTGGGTAGGCTTCAACGACTTTGTGTCGGATCCAAA
GTATGTCTAGAGGGAGGGGGTGATTAGAATACTTGACCAAATAAAAATTAGCCTTTTACC
AATTTTAGTTGTGGGCAAGTTTTAGCAATTGTTGTAAGTCAAGCACACCATACACATGCA
AGTCTAAGAGTGTATCAACACAGAGTAATGACATGCACATGTAAATAGAGGGTAGGGAAA
GGAAGATCAAACGCAAAGGTTGACACGATTTTTTTTGGCGTGGTTCTGATCGGTGGTGCT
ATCGTACGTCTACGTTGATGGAGACTTCAACCCACAGAGGGTAACAGCCGCGCGAGTCCA
