Contig Data
morexGenes
Links



Map Locations of contig_220384 (2126 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_220384

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31594 2 1186 bp MLOC_31594.2 Available Available LOC_Os03g46710.1, FRAME:+1, EVALUE:1e-26, 13103.m05027 protein expressed protein
MLOC_31595 1 422 bp MLOC_31595.1 Available Available None





CDS Structure of MLOC_31594






CDS Structure of MLOC_31595






Contig Sequence (2126 bp)

>contig_220384 2126 assembly3_WGSMorex_rbca.fasta
GAACTTGTGGAGCAGAGGAAAGTACCTGGACTCATGTTCTCGCCGAACCAATAGGAAGTG
TCTCCTTTTCATGTGTGACAATGTAATGCAGTACATGTCTAGATGCTTGCAGTCTTTGTA
TTCTTGTGCAAAATAAAAGGCTTCACAAAAATGGCTGCAGTTCAGGTGAAATGTACGACA
GACTGATAATCTCTTTTAGTCCTATCAGTGATAGTTAATAGTTGCTCTGTTTCATGCCTA
ATAAAAAAAGTAGCACTTCATGTTTGTTTTATGTTATCTGAATGTACATTCGCATCGCAA
ATACAAAACTTTAAACAGAAAAATCATGTGCTGTTGCCGGTCTCTCATGAAGTTTGGATT
TATGGGGTCTAAAAATATCTCTTGTTTTGTTTCAGTAATTTGAATGGTTGGATTCACCAT
TAGTCTTTGCATATCTGTCACTTGACAGAAATTTCACATTTCTTGTAATCTTATGGAGGT
AGTTGGATCAGGAGTATTTAGCATCATTGCCAAAGATGTGGAGGCCTCTTCTGCAGCAGT
TAGACCCAGCAGAGGGTGGTATTACGTGGACAGGGTGACTCACCTGTTCGAATGTGTGAT
CCTTGCAAAAAACTCGAGGAAGCAGCACGCTATGAGTTGAGATACGGACACAAAAATAGA
GTCGGGAAAGGTCAATTTATTTCCATGCGCTTTCAATCAAATTTGTTTCTCATCAAAGGA
ATTATGATTTGATTGATACTTGATACATCTAAAAGTGGCGAGTCGTGCTTGATTAAAAAT
TAATCTGTTTGTCAGCATTGGACACAATTGCTTTTGTATTATACAACCTTCCCAACCAGC
ACACATTAGGGCACTTGTTTACGGTCGAGCTGCAGGGCTACTATTTTGTTCCCTCATTGG
CTACTATTTTGTTCTTATTTTTTGCATAGGTGAAATGTGAAGCCAAGCGTGAAGTCATGA
AGCCTATATGCAAAGAGTCTCATATCATAGTAGGCATATTTGAGTTGTAGTAGTGTAAAG
AATGTAATAGACTAATTTAGTGTTTTTTTGGATGAATTTTATTTGTTCTATGATCTGTTC
CAAATATTGATTTCGTATGTGATTTGTCACCTATGAAATGGGAACCTCACAAATTGTTTG
ACAAATTACAAAATTTATGGTGTCGATATGAATTATGAGATCAGCATGACATGTGGGACC
AATGTGACTAGTGGGAGGAGTATAAAAATAAAATGGCCAGAAAAGAAAATCAAGAGAAAG
TAAAAGGCCACAACCCAGCTAAGCAAAATAAAGAGAAAAAACATTAAATGGGCTGGATTA
ATGGGCTTGGCCCATTTAAAACAAGGACCGGGCTGATTCTATGCCACGTAAGCTTGCCAT
TTTAGATCCGACGTGGCGTGGGCAGATTGCTAGTGACCAAAATAATTTCAATGCTTTTGT
TTGGTCGTAAAATCTTACGACCAATCCAACAAAAAGGTTGTTATAGTTCATTAGAAACCC
TCAGCTTTCGACCGTTTGTTTTTGGTCGTAAATGAAAATCAATGACCATTCGGTGACCAA
TATNNNNNNNNNNNNGTTGACATATTTCTTGTAGTGTACCTCACGAGCCCGTCGGTCATG
GTGGCGCCTCGCCCTCGGGAGCCCTTGCTTTTGTACCTCGTTGCCACCCTACACTCCGCC
TCCGCCGCTTTGGTGGCAGTAAGGGAGGAGCCAACAGGCAAGGGAAGGGCGCTACTTTGG
GAAGCCACAGCGGGCCCTCGCCCGATGCTTCGGAGGGCTCGCGCGACCCGCAAGCTCCAA
CTTCTCCGCGAGTGGAGGGACCCGAGGTCTAGACTCACGAATCACGTCTTGAAGAGCCTT
GTCCTCCCAAGATCCCGGCCTCCCCTCCGGACGACGAAGCGTCCCAACCTCCTAAAGCCA
CCAAGGATCAGGATGCCCCGGGCGGTCGCGTCCTCATCGAGCACCCCGTGTACTTGGTCA
GCACGGTACTACGGGACGCCCGCTCGCGCTACCCCATGCAACAGAAACTTCTTGTGGCAC
TCCTCGTCGCATCGCGCAAGCTGCGTCACTACTTGCAAGGACACCCGATCAAGGTCATCT
ACGCTTACCCCTTGGAGAAGATCTTG