morexGenes - Barley RNA-seq Database

Contig contig_2199658

Source Contig contig_2199658

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2199658 (1053 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2199658

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_31549	1	657 bp	MLOC_31549.1	Available	Available	None

CDS Structure of MLOC_31549

Contig Sequence (1053 bp)

>contig_2199658 1053 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGTTAAAATATGCATATACCTTGACAATATTTTGTGCCAATATTAGCAGC
TATTTATATCATTCAGTATAATGTAGTTATATTTTTCAGACGGAAGGATTGCATGGTGCT
CAAACAATCAAGGAGATGATACAAACTCACTCAGCCATCTTGATGTGAGAAGAAGCTCAC
CGATGTCTACGAGTCCCGGATGAAGATTAAGTATTGCAAATAATGCACTAACATGCATCC
CAACCATCTATGCTTTTGCCATGTCGATGTGACTAATGTGCATCCCAACTGCTACCTATG
CTCTAGTCATGTCGATGCGTACCTCAACAAGCTATGCTCTAGTATAATCAAGGGATGCAC
TAATGGCAATCCCCGCCATGCTCAAGCAATCAAGGAGATCGTACAGACTCACTCGGTGAT
CTCAATCTGAGAAGAAGCCCACCGATGTGCATGAGCCCTGATGAAGATTAAGTACTGCAA
ATAGGCTTCCTTCTGATTTTTTGCTAATTAATCAGACAATTATATTCTTAATAAATGGAT
AGAGGCCTCCGGCCTAGTTGCAAGAAAAAAAGATTAAGCGTCACAAATAATGCACTATGG
CCTCCCAACTACCTATGCTCTAGTCCACTCTAGTACTATAGCCATCTTCTAATAACTTTA
TAGCATTTGGAATTAATTGTACGGCCCAAGAAATAAATTTCATATTTGGGCTTGATGCAC
TCTAGTACTACGCAGTCATCTTTGGAAGCTAATATATCTTCTATATCTAAATAGCTGTCC
CTCACTAACTATTTTTCTTAACATGCAAGCATGTCACATCAATCCAATACATGCGTGAGA
AAAACACCATCCCACTATCATATGTCTCTCAACATGCAAGCATGTCACTTCACCATTAAA
CACGACTCATCTTAACATGCAAACATACTCCTTCCGTTCCTAAATATAAGTTTTTTTAGA
TGTTTCACTAAAAGATTACATACGGATGTATATANACATATTTTAGAGTATACATTCACT
CATTTTGCTCCTTATGTAGTCTTCTAGTGAAAT