Contig Data
morexGenes
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Map Locations of contig_218961 (3224 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_218961

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31445 2 1052 bp AK375583 Available Available None





CDS Structure of MLOC_31445






Contig Sequence (3224 bp)

>contig_218961 3224 assembly3_WGSMorex_rbca.fasta
AAATGCTATGAAAGATGATGCCTCTGAAAGTGAAACCAGGAGTGTTGTGTTGGTTGGTCG
GATGTTTTATTAAGTTATTCTTCTATTTAGGGCCCGTTCACCATCCCTCGGCTCCGCTCC
CGGAGCGGAGACAGTAGTAGTTCAAATTTGAGGAGCGGCTGCATAGATGCTCCGTAGATT
CTTAAATTTTAAGAAACTCGTGAATTACCGAACGAGTCCTCAAACTACAACTTTCCGTCA
TGATTCTTTCCGCGATTGAGTTTTGCGTGTGACGCCGACAGGAGATCAACCGCTCCGTCC
TCTGTCAAGTCGCTGGGGACATGGACGCACGTGGGGTGGTCGGTCATGGCAAACTAGGCC
ATGCACGCGGAGCATCGGTTTCCTCCCTGCCGTCGTTCACCTCCCTTTTTATCATTCTTT
TTTATTATTCGAAACTCTATGGTTTTCATAGTTGCTATTATATGAAATTATCACTATTTT
TCACGTGTTATTGTATACAGAACTCCCTCTGTACTGATCTTTTTTGTAAACGAAGGGGGT
AGTACACAGTAAGCTTGAAATTTCAAGCAGGATAACTTTGTTACATGAAAGTTAATTAAT
CTTAAACCGATAGTAGAATTCAATACCACATGAATTTCACACACTGCTTTGATCGAGACG
TGCGTTGCACGTGCATACTTAATAGTTTAATAAACTGGCTATCCACATCCATGGAGGGAT
AGCCATTGAACCAAACGCCCCAGTGGATGGAGTTTTTCCTACATAAAGCATCGGAGACAA
CTTGTAGTAATTCACAGAGGCAAAATGGGCAAGTGTGACTGACTAGCCAGCCAGTAGTGT
TACTCAAGCATCGGAGTTACTCAAGGAAGTGGGATCCGGCTTATGCCCACCTAGTCCCAC
CTGCAGCCTGAAATGCGAGCGATTTCAAATCAAAACAGAAGGAAAATAAAGTTTCCTTTT
ACACCAGCGATTGTCAAATACTCAAATACAGTATATCAGACCGCATGTAGATTGTAACGG
ACAAAATAAATACATAATGAGATCTCAGTTTCACTCTTCGCCTAGAGCAATGGCTCCTGA
TAGCACCCACCAGCACATAAAGTTACAACAGCCGTAGAAGATCATAACATAAACGTGAAA
TTACACATCCATAGCTGTTACATCGCCAAAGAAAAGAAAAGGCCCACTTCTCCGAATTCT
CAGAGTTTCGCTCTGGAACCCTTTGGCACACAAACAAACTCGCTCATCACCGCATCAACC
ACCGCGAGGACAGAACACTGATCACACAACAGATATATCGGCCAAAGGTACATCATTGGT
CTGCAGGCTGGCGAACTAGATGCCGAATATCAAGTCCATCACATTTGTTACAATGGATTT
CGCTGGAGCAGCTACGCTGCCTGTTGTGCGACGTCCCCCCTCTCTGATAACGTTTGTCGA
GGACTTCGGGTCATACGGGCGTGGCAAGGCTCCTAGTTGGTTTGATGCGCCTGTGCTACT
CTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGATTGATTCCAGT
GAACCTGTCATCCAGCTGCTGCTGGTGCATGGGATCAATATGCTTCACTCCAATTATAAC
GCCACTGCATAGTTGGATGCCATTCTTTTGAAGGGCTTTCCTTGCATCATAAGAGTGCTG
TGAAGAGAATTGTCAGTTTAAGATCCAAGGCCAGAGGAATTAATTGCCACACCAATAATG
CAGAGACCTATCATGTGATGCATGGGCATAGCAGAACTGAGGCAAACGTTTGTTAAGAAA
AGAGCTAGGTTTATGACTTCAAAAAGCACTTTGAATAAATCTTATCCCGCTAATTACAGG
CCAGAGAAACGCATAAAAATTTACAACACGGGTTAATGCGCAGACAGATTATCCGGACTA
CAACATGTGATGATGAAAAAACATTCTCAACAGGCCAAAACTAGCTTCACAGTGTGTTTC
ATGTTCAAAAGATAGCCAAATCATACACCACGGCATGTACACGCACGTGGACCTAACTCG
ATGTGCGCTGTGGTTTAGCTAAAAAATAGTGACACTTTAACTGAAACTGGAATAAAGAGC
ATGCAACCTTTAGGCTAATTCCATCTTAAAATAGGGCAAAAAGGCATCTCTTTAACTCAG
TGCAGCCATTCAACACTGAACAAGTAGAAGATTAATTCCAAGGTCATATAAGATGGTGAA
TGATCATGCACTCATTACCTAAAGACATGAAACAATAACAGTTCAAGCATAAAGGAAATT
ATAGTTATAAGTTTATGTCGAGTCACTGGTCATTTGCAACTACTCATAGTAAGCAACAAA
CCAAATTAATACGACTGTTAGGGAAGCATAAAAACAGGGGAATCGAAAGGTTAAACAGAA
AACGGTAACGACAGTAACTGAAGATGTGATTACCTGGTATAATATGTGGATCCAATTACC
CTCTCTTGGGCCAGAATGATGTCTCAGTATAACACCACATTTCTCAAACTCTCGGAGAAC
GAGGTTGGTATCTCTAAGGGAGAATCTGTATGGGGAAACATCAAACGTCAAGAAACCAAG
ACATCATATACTAAGGCACCCAACAAAAAGCTAACTGACGGCTACTGCTTTCTTGGGCAG
GGTCTGCAAACTTAACAAAAATGAAAGTGCACTAGCACTATTGAATCCAGCATATCCAGG
TGCTAAGATAAGCACTAAGAGCAACACCACTAAATGATCAATTTTTGCTGTTGCTCGTTG
ACATGCACAAGAGCAAGCACATGGAAGTGACAGGCCTATGAGCCTACCGGCAAAGCAGCA
ATTTTTTTCCAGCTCCACAGCTTCTTGCGGTTCTGAATCTACCATGTACATGCGGCAGGC
AACAGCTTCCTCAGAAGAAAAAAAAGTGATGAATTAAGCAGCACAGTTTCCTCACCCGAA
TACAGTGACCCACTCCTCGCCATCCACCTTCCCTTCGGTCGCCGGCTCCGTCCTAGCCGT
CTCCGTCGCCGGAGTCACGGGCGACGGCGCCTCGGCGGCCGCGGCCGTGGCCGTCGGAGG
AGGAGTACAGGGACTCGACGGCGGGGGCAGCGCGAGCAGCTCCTTGCGAGGCGGCTCGAC
GACCCCGTCCATGGGGGATCCGTGGGCGGAGGCCTTGCCTCGGGAGCGGTCCCATGAGGG
CGAGCGGCTGCCGGAGCCGGCACGGGGGGAGGGGGAGGAGGCGA