morexGenes - Barley RNA-seq Database

Contig contig_217376

Source Contig contig_217376

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_217376 (2749 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_217376

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_31283	12	1893 bp	AK363297	Available	Available	None

CDS Structure of MLOC_31283

Contig Sequence (2749 bp)

>contig_217376 2749 assembly3_WGSMorex_rbca.fasta
CACAAGTAATTTGCACGCTATCTACCCACAGGCAGGGAGCTTTACTTTATCTCTATCTAT
AAACCCAATATTTACATGCTATAATTAAAATCCAGACTTTGAATGACAAGTTACATTATG
ATTGTGACATGGATAGTTGGACACACTGATGCATACTTCATAGGGATAACTCATCGGAAT
TATCTTAGCGCCTGTGCGTTGCCATGGAAGGAGAGGAAAAAAGCCACACTAATCACATAG
AAAATATGTTTATGCCTTGCAGTGGGAGCATAAGTGTTCAACCTGCATGGGGAAGAAATC
GGTCAAATGATCTTTTCCTAAAATCTAAGATATACACCCAAAAAAATACATATTGTAGGC
AAAAAAGAACCAAAATTTGAAAAAAAAATTGCATATTAATGAGGGTATGATGATGCCTCA
AGGCATGTAGTATGGGCATGTACATCGCAAGGAAAAACAAAAAATAATAGCATTAGTAAT
TTATGTGTATGTATAAAAGTACCCCCTCCTTTTCTAAATATAAATATGTTTAGAGACTCC
ACTACAACCTTTATATAGATGTATATAGAAATATATTAAAATGTAAATTCACTCATTTGC
TCCATATTTAATCGTTAATATTTTTTAAAAGGACTTATATTTAAGAACGAGAGAGTAAAT
TCAAACTGCATGCACCACATAATGTAGCAGTGGCAATATGTAGACAGAGAGGGACATGGG
CGAATATTGTCACCCATAAATTCAAAGCGTGAAGTCGTGTATAACAAAGTGATAGGCATC
TGCATAAATATTTAGCAATTAGTAATGCAATAGAAAAACTAACCTTAATAATTGATCAAT
GTTAGCTTACATGTGTGATTGTTAAGTTCTTCCTCTGCATACCTAGACATGCAAATTAAC
CCAAGTGAGCATCGATTTTCTTCTACACAAAAGCACCATGGAAACAATGAGTTATTTTTG
AATCACTTATTTTGAAACGAAGGGAGTACATAATAGGTTGTTGCACTAAACTAGCTGACA
ATCGTCCCCATCACCAGAGAACACGCGACCGTCGCCACGAGCGGCGATGCAGCCTCTCCT
CGGCCGTCTTGCAGCTATGTCCACGTGAAAGTCACGAATCTATCTAGGATTGGGTTCAGC
AATGGCAACATGCTGGCAGCATCTTGACGGTGCCGCCCAATGGAGTGGGCTGCAGATTCG
TCGACTCTAACCACCATCCACCAAAACATCAATCAGAGCGGCGCACAACAGCATCTTCTG
CATATACAAAACATGTATCAAAGAGAAAACTTGATCGGCATGCATCCTTCTACATTATAA
TCCACCTGATTAACAGGTTTGACAGGAACTGGTGCCAAATTTAGTAGGTTGGTACAACCA
ACTCCTGACACCAATACAAACTCATCATAAGATACATTCCAAAGAACAGGAGTTATACAA
TGTAGAACTGAAAAACAAATCCAAAAGAAAAAAAGGTGAACCACCTGGGTCACCAAAATT
CTGGAACACTCGGAGACTCAGAGAATAGTAGAGAGAAAACTGACGGATCACACACTTGTA
CGCATGTGGAAATTAATACGCCGGAACAAATCGAGAGGTTCACCTGTAAGTGAAACACAA
TTTTGGCAAGAACAAAATCGACAACAGTACACCTCCACCGCCCCCTCTGCACCCACCCAT
CCACAGCTGCACAGAGGCCAATCGGAGAAAGGAAGAGAAAAACTTATACCAAACTATATG
CATAATCGATATTGGAGCAAACTCACCAAGCGCCCGAACTCGGTGATCAGGAAGTTGACC
TCCGCGCCCTTGGGAAACCTGTAGCCGCCGACCTCCGTGTCGCTCTGTATGCCATGAGGG
AGGAGGAAGTGGGCCGGTGGGTGGAGCCGCAGCCCCTCGAGGACGACGACCTTCAGGTAC
GACATCCCCTGCAGGTCGCCTTCGCTGAGCTCCGGCTTGCTCCTGACCTCCTCGTAGACC
TTGGCCTGCTTGTCTGGATGGTTCACCAGCTCCGCCATGATCCACTCCAGCAAGGTCACT
GTGCTGTCCGTGCCACCGCTCAAGAACTCGGAGCAGAGGCTGACGAGCTCAGAGTCCGTG
AGTGGGCGGTCGCCTTCGTCCGCCACACGGAGCGCAAGAAGCGAGTCGGCGTAGCATGGC
GGGTCATCGGCGCCGCGGGGCATGGAAACAGAGCGCCTTGCTTCGATCAGCGGGAGCAAT
ATCTCATCCTGCCTCCGGCGGACGGCAAGGTGCGCCTCCCATCGCTTGCAGAAGAGCCTC
TTGGTGAGCGTCGGGAAGAAGGAGGAGATGGGGAAGCCGGTGATGGTGCGGACGACCCAC
AGCTGCATGTCCTGCATCTCGTCGAGCACCTCCGGGGAGAGCGTGGCACCGAGGCTCATG
TACAACAGCAGGTCGAACATGGCGTTTTGGAACAGCGTCCTCACCTCTACGCGGTCTTCG
GCACCGACGCGCACGCGGAGGTCGCGGACGAGCGTGTCGCGCATCCGGCGCCTCATGGGC
GCGAACTGGCTGACGCAGGCCGGGTGCAGCGCCTCGGAAGCGAGGTTGCCGCGGACGAGG
CGCCAGTAAGGCCTGTAGGGCGCAGCGCTGATGTTGCGGGAGCCAGACGTGAAGAGGAGC
CCGGGCTCGAAGAGTCGCGGCCGGTCGGCGAAGGTGGAGTCGCCCTGGACGAGGATGCGG
TGGGCGAGGCGGCGGTCGCAGACGAAGACGAGGGCGCAGAAGAGGCGGG