Contig Data
morexGenes
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Map Locations of contig_216171 (1060 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_216171

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_31149 1 206 bp MLOC_31149.1 Available Available LOC_Os07g39940.1, FRAME:-1, EVALUE:9e-25, 13107.m04148 protein helix-loop-helix DNA-binding domain containing protein





CDS Structure of MLOC_31149






Contig Sequence (1060 bp)

>contig_216171 1060 assembly3_WGSMorex_rbca.fasta
TAAGACACATCACGATCACACACAGAGTTCCTAGGGGATAAAAGGCCTAATGCAACCATG
TCATTTGGGCTTACCTTGATCTGTAGCTTCAAAAACTTGACGTAGAGGACTGCCTCCTCG
AGCATAGTGCTGAGATCCACCTACGAAGAAATTTCACAACAGTCAGAAAGTACTAATGCC
AATAANNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTAGATTTTTATTTTTTGAAAAGGAG
TTTGCTTCATACATAGAGTAGGCAAAAGAGGATGGACTCACTTTGGTTCCGTTGGGCACT
AGCTTCTGCAAAACCCGAAGCTTTTCGTTGATCTTCTCCCTTCTTCTCTGCATTGGACAA
AANAAAAGTCTGAACCAGTCCACTGAAACAGTCACATTGAATTGACGCGCGGGGATGCAC
ATGCGTTCAGCTCACCTTTGCATACAAGTTCTGGGGGTTGCTCGCCGGTCCGCGGCCGNN
CCGAGCTTTCACGATGCAGACGACTCCGATGTTGGCCTCCTCGCCGCCGTCAGAAAACTG
AAAATGTGCACATCAATTTGCGTCAAAGAAGATTACTACAAGTTCCCGCAGCAACCTTCA
AAGAGCATTCTCCAAGGTCTGGTTCTCCTCTAGAACCAGCACGGTTTGCTTCTGCCAAAT
CAGATGAGAAACCGGCTTAAAACTACATGCCTATGCATTTATAACACATCACAGCTCATG
GATTACCAAATACATACAGTAAATCGGAACATGACTGATATCATCTAACAAAAATTCTAG
TTGTGCGGTACATACATGCCTGAGGCTTAATCGCCTCCTGAACTGCCTGGAGGGCGAAAG
CTTCAGGGGCTTCATTCCTAGACAACACGGTTCGGAACACTCCCTGCGACCGAGCAAATG
ATTCGAGTTTAGGGAAATTCCCATCCGAATTGGCGGCCTATCATCCTCCCGGTCTAGAGC
ACATCGCGCCGAAGCGCCTAGGGTATGAGATGGGGGGAGGGAGGGGGCTCACGATTATGC
GGTCGCGGTCGGCATGGCTGGAGACGACCGCGGGCGCGGA