morexGenes - Barley RNA-seq Database

Contig contig_2152899

Source Contig contig_2152899

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_2152899 (419 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2152899

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_31056	2	260 bp	MLOC_31056.1	Available	Available	None
MLOC_31057	1	160 bp	MLOC_31057.1	Available	Available	None

CDS Structure of MLOC_31056

CDS Structure of MLOC_31057

Contig Sequence (419 bp)

>contig_2152899 419 assembly3_WGSMorex_rbca.fasta
TTGTAACCATCTTATAATATCTGAAGTCTATAGTCAATTCTATATAGTAATTGTTTTCAC
ATTTTCAATTTGTTCATTTTTGCAGTTTAATTCTCAGAGTTCTTCTATCTCTTCTCAAGG
GGGCCTTGGGCTAGGGGTTCAGGGACCAGGTATCCCTTCTGCCTTCCTGTCTCAGCTACA
ACCTCATGAATCCCAAATTCTCGAGCAATGTAATGGCCATGCATTATTTCTAGTATACAT
AAAGTTGGAGGCTCATCGTGTTTGACTAGTTTTTCCTTTGCATTAAGAATTATCAATATG
TGCACACGCTGGGCAAACAAAAAGTGACGAGCAACAAGGCTTGGCCGATGATGTTGGTGT
GGAGTCTGCTGCAACAACTGGACCGATTAAGCACACCAATGAAGATGACACGAAGGCTC