| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_215022
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_31026 |
3 |
2736 bp |
None |
Available |
Available |
LOC_Os05g41970.1, FRAME:-3, EVALUE:8e-20, 13105.m04464 protein SSA1 - 2S albumin seed storage family protein precursor, expressed |
CDS Structure of MLOC_31026
Contig Sequence (3196 bp)
>contig_215022 3196 assembly3_WGSMorex_rbca.fasta
GCGGGAGAAATCCTTGCCGGTTCGTCAGTCTTTGATGCGGTGACACCGACGGGTGCCACC
ATTCCTTCGTTGAGGGTGTCGATGGTAGCCATCCCCTACCTCCTTCCATGTGGTGGGGGA
AACCCTAGGACTCGTCCGGGCAACAGCGTCGTCGACGTCGCATCCCTTCTTGGAGGTGCT
GCTTGACACGTGACGGATCAAAGCCTCGGGCTGTGGTGGTTTGTCTTCGAAAGGCGCAAC
GGTGGCAGATCATCCGCTCTTTGTCGAGCTAACACTGTTGGCATTTGTTTCTTTTTTGTT
TTTTTGGCTTGATTTGCTGTTCGCCCCAGCAATGATCTCTGTACGGTGTTGGTTGCTCTG
TATACAGAGCGGGGGAAACCCTTTTTCGGTAAAAATAGAATTGTGACCTATAAGATACTT
CCTCTATCCCAAAGTAAATGATGCAAAGTTTATACTAAGTTAGTATAAATTTTATACTAA
AACAGCAACACTTATTTTAAGGCAAAGGGAGTACATTATTACGACACATCTGTTCCTAGT
ATTATCTTGCTGCAGTTTTTTGTCTTCTCATTCAACTTTGACACTTGGCGAAGCAAGCTT
TCACACACCATTTCCATTGGATGGCCAAACTGTTGTACTCCCTCGATCACGGTTTAGAAG
ACGCGCATGAGCAATCTCTTAGACTAAGGTGAATCTTGATTGGCTCTAATTTTTTTGCAA
GTGCTCACACAATAACCGCACGCGCCTAACTATTTGAGAAGATAATGCACAGTAANCTCA
CACAACCACTAAACGAGAAGTGCATGCTACCTACTAGTACTTTTACTTAATTAAGCATTA
AATGTCACGCGTCTTAATCCTTTTCTGTTCTGGAAATGCATGTAAACGAAACCGTGACGG
AGGAAGTAATTAATCACAATAGAACGTAGTATTTCTTTTAGTAGCCTGAGCTCTGCTAAC
ATTCATGTTGAAAAGTTCAAAGCATGCATTTTCAAGTTCCAAAAAGATTCCTTAACAAAA
ATGTGGCGCACTGAAAAGAAAAACAGAAGGGAAAGTTCTTGTTGTACACCATACCAGTGT
ACCTTGTATCCTCACCGTCGGGGATCCATAATTCCAAATAGTGATGCGCTCTCCGGCAGC
AAATAAAAGCATTTTCCCATGGAGTTTTCAAGATTTACTTTGTATTCCTGTGCCGTGCGT
GTACATGTATACGTGAGTGACTATTTTTGTGAGTTTTCGTGAATCGCACGTTTAAAATTT
TGAAAGGAGAAGAATTACGGCAGTCAGAAGCAAAAAAGTAAAAGCGGCCCTGGCAAGTAA
ATCCATTTGGTTATTCATTTATTTTCCATTGTTATTGTCATTTCCGCATGGAGGATTGTG
ATCACATTCACAGAATCACAGGTCACACTTATTATCAGAGCTCACAGACTGCGTCGACCA
ATCAGCTAGCCTAGTACTGGCAGGGTGGAGAAGACGCTACACTCCTGGGGCTCGATCCGG
CACGCGGTCGGTAGCCGTACCTTCGTCAACCTCACGCGACCGACCTTCGGTTTCTGCTGC
GCCCCCTCGCCGGAGAACCCTTCTCCCTGCTGCTGCCGCTGCGGCCTCTCGCGACAGAGC
ATCTGTCCTTGCTGCTGACCACCACGCCCGACGGTCACGCCGTGGTAGCCTCCTCCCTGC
TGCTGCTGGCTTTCACCTGTCTCACTGCCGTACTGCCCCCCTTGTACCTCCTGCTGCTGC
TCCGCCGTGGACTCGCCGGAGCATCCCTGCTCTTGTTGACGCTCCCCCGACGAGCGGCGG
CGCCCTTCCCTCAGCGGCGGCATGGACTGCTCGTAGTCCCGCACCATGCCACGGAGGGCG
GAGCAGCGGCACCCGCGGCTGACGCTCTCGAGCTGCTGGCAGCACCGGTCCCTGGCGCCC
CACTGGGCCTGAAACGGCCGGACGCCGACGGCGCGGCCGGTCAGCTGATGCTCGAGGATC
TGCCGGCACGCGAGGAGCGGCTTCGCCTGGACCTCGCCCCGGCACTGCGCGTCCGCGAGG
CTCTGCTCGAGCACGCCTTGGGCGGCGGAGATGGTCACCAGGGTCGTCAGGAACACCGCG
AAGAAGATGAACTTGCCCATGTTGATCCCAGTACGAACTGTGCTTGCCTTTTCGTTTGTG
GCCTATCTGTTGTGTACTTGTGTGGTGAGATGCTAAAGAGATTGGGATTGAAACCGAGTC
TTTCACGCTGGAGTGACAGATTTTGGAGCTTGCTAACATATTTCGCTGATGATGTTGGAT
GAGCTGGAAAGTTGCTTTTACTGCCAACACTCTTATCGTGGAGTACTCAGCAAGTAACGT
CTTTTGCACTAGTCATGAGTCACGATGATGAGGATCATGTCCGACTTATCCATAATATAA
TACTCCATCCGTATCAAAATAATTGTCTCGACTTTATACTAGCTTTTATACAAAGTTGTA
CCAGACAATTATTTTGAGACGGAGGAAAAATACCTCACCTGTGATAATCTTGTTAGTATT
TTGTACACTTCGCAATGAATTTTGAACAATGCAAAGGGTGAATCAATCAACTTTAGTTGT
ACTTTTACTTTGGAGTTTCCCTTGTTTTGAGAGGTGCTTCAGGAGGATTTGACAAATGCT
GGGTAAATAAATTATTGATGCGATGTCACAATTTTTTTTGTGGGGAGACAAAGACAGTCA
AAGAAGGATGGGCCTGGTAAATAATGTATGTCCCAAAGAATCGAGGAGTGACAAGTGGCA
AAACATACTTGCCATTTTCTTGAGAATCCACTCTTTACATGCTACTGTTTTGAGAGTTAA
GTACTTTCCCGATGGTGAATTTTCGAATACACGCTTTAAAAAAAGATCATCGGTTACTTG
GCAAAATATTATGGCGGGCGTGAATTCTTTGAAACATGGTTATATATGATGAGTTGGGAA
TGATTAAAATATTGGTATTTGAGATGATGCTTGGATTTCAAACCATGCAAATAGACAAGG
TATCCAAAAATGCCGTTTGGAGGCCGAGCTCCATGCAGCTCGTAATCTCCATTGTCAGTC
ATCATACCGATCAACAGCTCCATGCAGCTCGTAATCTCCATTGTCAGTCATCATACCGAT
CAACTGCAGTCTCGCATTAATCACATATATTTCATCTCACAGGTGCTCCTCTGAGACGGC
GAGACACATGCTCTTT
