morexGenes - Barley RNA-seq Database

Contig contig_2142495

Source Contig contig_2142495

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2142495 (356 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2142495

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_30949	1	140 bp	MLOC_30949.1	Available	Available	LOC_Os05g05280.1, FRAME:+3, EVALUE:9e-19, 13105.m00547 protein zinc finger family protein, putative, expressed

CDS Structure of MLOC_30949

Contig Sequence (356 bp)

>contig_2142495 356 assembly3_WGSMorex_rbca.fasta
TGGAGTGCATCGACCAGTGGCTGCGGCTGAACGTCAAGTGCCCGCGGTGCCGCTGCTCAG
TGTTCCCCAACCTGGACCTGAGCGCGCTCAACGGCATCCGCTCCAGCAGCGAGATGCTAC
AGCAGGAACGCCCCTCGGGAGCATCAGCTCTTACAACTGGAAGCATCAGAAGTACAAATG
GAGATGCTACGGCTCTTACAACTGGAAGCATCAGAAGTACAGATGGAGAGAAGAACCGTT
TGGCAAAGGCTTCGCTTGCTTATAACTGTGAGAGGTAAATGCATTTCACTTTAAGATAAT
TTTAGCTCTTTCCGGTGTGACCGAGAAAAATGTTGATCCTTCAGGAGAGGAAATTG