| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_214035
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_30925 |
1 |
886 bp |
MLOC_30925.1 |
Available |
Available |
LOC_Os01g27360.1, FRAME:-1, EVALUE:5e-111, 13101.m02844 protein glutathione S-transferase, putative, expressed |
| MLOC_30926 |
1 |
1143 bp |
MLOC_30926.1 |
Available |
Available |
LOC_Os02g45100.1, FRAME:-2, EVALUE:3e-37, 13102.m05055 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
CDS Structure of MLOC_30925
CDS Structure of MLOC_30926
Contig Sequence (5831 bp)
>contig_214035 5831 assembly3_WGSMorex_rbca.fasta
GAAGGGATTGGGGAATAGTCGTTGGGAGGGGTTAGGGAGAAGTTGATGGGTCAAGCGAAG
GGGTGCAGCCCTCGAGAGAGGATGGGGAGTATCCAACGAGAAGGGATGAGGTCCATGCAT
GCAACTCAAGCGATGAAGGTGTTGGATCTTGAAGATTTAGTGCATGCTTAGCATCAACGA
GGATCTCGACACACACTAGCTAGGTCGAGAGGTGATGAAAGGAGTGTGAGGGGGCAGGAG
GAGGTCTGAACCCTAGCTATTGAGGAGCGAGAGGGGGTGGGAGAGTGTATGGGCCAAAAT
TTTGGGCTTTGTTTACCCATGAATTAGCGGGACAATAGCGATTAGTCGGCCTGACAAGAG
ATTAATAGGCCTAACAAGTGATTAATCGGTCTGATAGACCTATTAATCGGTCTGACAAGT
TAACACGATGAATAGGTGCTATTCGATTCGGCCATCCAACGAGTAGCGATTAACCGGCAA
GTTAACTGATTAATCGAACGAATTCTTGAACAGTGATAATAAAATTGATACACTTATTTT
TAAACGAAGCGAGTATTACAAAACCTTTATTATCCGATCGTGGTTACAACATCATCCACC
AGCGTTCGGATCACGAAACAAGGGGCACACACGTGCGCGGTGCGGGCGTGCCAAACATGC
CCCGACCCCATGCGATCAGACCCTTTTCTGCATGTCGGCGCCGAGCTTCTTCATCGAAGG
CCTCAGCATGAGCTTCTCCCACCACGCTTTCACGCAAGGGAACGAGTCAAACAAGGACGC
GTAGGGGGTTTCCATGAAGCGCAACGTGAAGGGGAAATGGTTGAGGTCCGCGACGCTGAT
GAAGCTTCCAGCCAGGTACTCGTGCTTCGATAAGCGGCCCTCGTAGATCTCAAGCACCTT
CTTGAGCTTCTCCATGCTCTCGTCCACGACCTTCTGGTCCGTCTTCACGCCGTAGGCCGT
GGGATACACGATGCACTCGTACACGATCGGCGCAACCGCCTTGCTGTACTGGTGCGCCTC
GACCTCCGCCCACACGTCCACCGTTGCTGCTTCTTCCGGGTCGCTTTCTCTCAGCATGTC
GGCTTCGTCCGTCCTGTATTTCCGGAGTATGTACTTGGCGATGGCACGGGACTCTGAGAA
ATAAACAGACGAGCATGCAACATGTAAGCACGTATACTCGATACTACTCCCTCAGTCTCA
AAATAAATGACTGAAGCTCAATACAACTTTATACTAGAGCTAGTANNNNNNNNNGACACT
TATTTTGAGACGGAGGGAGCACAAAGTAACGAGATCGAAGTATCTATAACGAGCGTTCTA
TGGTTTAGGCTTTAGAAAGAAAAGAAGTAAACTTTACCAAAGAGCACAAGGTCTCCATCT
TGAAAAGCTGGGATTTCACCAAATGGCTGCGAGAATGCACAAACACGGATCGACGAACAA
GGTCAGACGAAAAGTTTCCAAAAAATCTATGCTAGAGCAGTAGTAGTACGAAGAGTACCA
AAACATGTGCGGCTTACGTTTCGGGCGAGGTGCTCGGGATTCTTGTGTTCCTTGGCCGCG
AAATCGATGTCCACAACCTCGTAGTCTGCACCAACCTCCTCCAGGCACACCAGCACGCGC
GCCACGTTCGTGAACGCGGCCGACCCGAACACCTTCACCGGCGCCATTCCTGAGGGGGTA
TGTGCGCTGTGGCGGGTGTGCAATGGCAGCGTAATCCCTCGTCTTATAGTACGTAGATGG
CATGCCCAGCACAAAAGTGACGCTTTTCTGAATAATTCCTCAGCAGTGTACGAGAATCAG
TACTCAGTCTTCAGCAGCCACCAATCCCAATTTCTTTACTACTTGAGTGAATCGCGTACT
CGACCTTCCAGCTGGTACCTGCTAACTCTTTTGGTTATAATAAGTTATCTGGGTACATTT
TTCTTTCTTTTTTCCGTTTGATGCAGCTATATGAAATTTGACAAGTATACTGATGAATTG
TTTGTGTCGTCACCTGTGACCTGAGGCGCTTCAAGGAGAACGAGATCGTCTGTGGTGCAA
TCAGGATTTCCAGTGCCAGAGACCTTAGATTTTGGATATAATTAGTTGTGCGGCCAGGTT
TGTTGTGTCAGTATGTTGTTCATATTATTGTTACAAAATCTACATCATTATAATTTGGAT
CACAGCAGGTGTACATCCTTTGGTCACAAGAAAATAGGCAGTGTTTATTTTTATTTTTTT
GAAACATAGCGGTCTTTATGATTTTCCCGTTTCTTAAGCAAACCCAGTTGTGCACCGTAC
ATCCCAAACTATCTTTTTGGCGAGGAAACAAACAAACTGTGATTTCGAAAAATACGTTGT
TGGAAAGCATTGATGATACAATTAGCACCGCATGAATAAAAATAAGAACAGCTGAAATGC
TAGTCACAGAGGATTTAAACAGGACTAAAAGAAGTAAGATTTCACACAGGATTTTCAAAT
GCCAATGCTTGTTCTGATGAGATTTGAAAAGGTTCCGAAGGCAATTACAAGTCGACATCG
ATTGTTCTCCTGTATCACCCAGAAAGATAAAGCATAGAAAATCTAAAACCAAACAGTAGC
AAACAAGAATCACAGCCCCAATTGAGATAACACATTACACCAGAAAATCTATCAGGACAA
AATGAATTGGGGAGGGTGCAAGATGATTAACAATGTCTCACTTCTGCCAAGAGAAAATCA
AGCCTAATGTCTGCATCCAGAACTATTGAACTTCAACTTCCATCTATCAAACTGACAAGG
GCCAGGGGATATTAGTAACTCAACGATTTGTAGAATTTGTAACATTCCATTGAAAAGATA
ATAGTTATTACTCTACTTAAGCATTCAGATACCCGCAAAAAAAAGTATTCAGACAAAATA
TTTAACTATCATCATATTAACATGGCCATCGCTGTACAATTATCAAAATGACACCAATAA
TGCAACCTCCATATTCCTGCTCCGACCAGAACTTTGAGATTGCCACTGGTGCCAAATCAA
GATTTTTTTTGTTTGTTTGGCATAATTACTATAAACAGTTCACGATCAGACAACTTATCC
ACACAACAAGGAGTAACATCACATATCACCACTTACACAAGCAAATACAGAACAGAGAGC
TTCTGCTTTATATAGTGTTTGACTTTATCAGAGTCTCTGAATGAAAGGGCAAATACATGT
TATGCATCACATATACCACACATCCTACTGCGCCAAATGAAAGATGACTCGTTATGGCCA
AAATTTTATCAGGACTAACCATTATTTTATTATAACCAAAATGAGTCGGCAAGGGCATGA
GATAATTAATAATGTCACTTCTGCCTTGAGAAAATCAAGCCTAATGCCAGCACCCAGAAC
TATATAACTTGAACTTCTAACAACCTAACTGACAAGGACTGGTGGATATCACAAACACAA
TGATGTGCAGAATTTGTAACAACCCCCTAAAGTTGAAGTTATTACTTTAATTTAGTATTA
AGACACCGTATCCAACTATCATATTAACATGCCATATCTGCAAAATTATCAAAACCTGGA
TCGAACTTATAAAGCAATAATGCGACTCCATATTCTTGCTCCGACCAAATTTTGAGATTT
GTCACTGGTGCCAAAATCAAGAGTAACTTTGGTTTCGCATCATGGCTACTACCAGTTCAT
TTCTAGACAACTTAACCACGTGACAAGGAATAAACATCATATATCATTACTTGAAAAAGT
AATACAGATAGAGTCCTTCAGACCTGTGCTGCTAATAGCCACACTAATCGAACTCTTTCA
GTAGTAGCCAAAAGATGCAGAATATATTTGTAGACACTAAATGTTAGGAGTACATTATGC
ATCCTTATACCACATCGCATAACCCATAATATACATAGCAATATAGTATCACCATAATAA
CCTTGACCTTGAGTCTGAAGCTCCAAACAAGAGGCAACAACTTATAGTCATTCTTAATAC
ATCTTGCTATTGACCTAATATCCAAATCTTGCAGCAATTCAGTATGTCTTGCCTTGGTCA
TTGATGGCACAATACAACTAGCGCCTAGGCAAGAGTAAAACTGGATATAACAGTTGATAT
TGGTACAGGTTATCCATACAAAGAGGAGCAACATGAGCATCAAATTCAATGCATATAACA
CTGCACATATGGCCACTTGCAGAAACAATATAGCCAGGCAGTTACACACTAATCGATCAC
TTGCAGTAGCAACCAAAATGCATCATATGAAGAAACCAAAGAAAGAACATCATCTAATTT
TGCATCACATATGCCACATTGCAGTAATCCATACCCTATATAGCAACATGGCATCATCAA
TCACCAAAACAGTCTTGATTTTGAAGATTCAGACAAAGGCAATAACTTCTACTAGTCATT
TTCATGTTGGGCCAATTCGACAGATTGCACACCAGTGCACTAGCCGACACCGTCAAAGCT
TGTTAAGGTAGATAACACTCATACGTATAACAAAGATCTTCACCTGAAATTCAACTACTG
CTAAATCCACCAACCCAGTAGATCAAAACTTACTAACGAGTGCTCCGATTTAGAAGGGCG
GAGTAGGACCGTTTCTCTTGAGCGCCTTGTTCCCCGCGACGACGGCAGCAGCCATGAGGC
CCCCGACGGCGGCACCAACGATGGCGGATCGCGGGCCCGAAGGTGCACGGTAGAGCATGC
CGGTCCCAAACCCTGCGGCGATGATGTTGCGCCAGTCGTCAGCGTCGCGAAGGTTGCCCA
CGGCGCACTCGGTCCCGGCGAAGAGTAGGCCGATCAAGGCGACATGGCTGCCGTACCGGC
GTCCCACGGAGCCGCAATGGTTGAGCACGCGGCTGGTGCGGAGCTTGAACGACTCGCCGC
GCTCCGCCTCCGCCACCGCGCGCTTGAACCCCTTGGCGGCCCCCGCCGCGGCGCCGACGA
GGTACCCATATCCGGGGTAGAGCGAGAGGTTCCTGCCCCAGTTGCGGGTGTCCATGTCCT
CCGGGAAGAGGACCTCCGGCGAGGTCGGTAGGTCGTAGATCGCGCGGCACGAGGGGAGGC
TGATGCCCTCAGGCTGGTACGGGGTGTAGGCACGCCGGGATCCGTCGGGGGCGCCATGCG
GCAGGCGTTCACCGTACTGGGACTTGTTGGCGGCGTCGGCCATGGCGGCGAGAGGCGGCG
AGCGACGGCGGGCGCTGGGGTTTAGGGCCTAGGTTCGGGGGCGGCGGTCTTTGCGTGCTC
GTGGTAGGCCGGAAGGAATCTCTGATGTTCCGCATATATCGCGCAGGGGTGTGACTTTAT
GGGCCGGCCCATTTAGACACGGGTCTGTTGTTGTTGTTTTTTGCTTCTCGGGCGTTCTTC
TCTGTTCTTTTCTTTACCGGCTTATCCTTTTTCCAGCTTTACTTTCCTTTCTTTTAAGAG
TAGTTTTTAATAATTCGCTCTCTTTTAAACAAATATTAGTAACATTTATTGGAAAAAATA
ATAATATGAAAAAAATAATAATTTTAAAAACCGTGAACATTTCTTTATAACTTTATAAGA
ACTTTCTTATTTATGAATATCTTTTATTTTAAAAAATAAATAGAAAATTTAAATTCGTGG
CCATTTTAAAAATCTGTTAGAACCGCCAGTTGGTCTTCTTCTAATCGAGCAGCTAAATCC
GCTTGTCATGGAGCGAACAAACAAAAGGTTTTTTAACTCTAGGCCATACTCTTCCAGATG
GTAATTATTCAAGCAACAAAATAAAATCAATCACATACCGAACACCCTATTGTGTAATCC
ATTTACGTCTGTGCTCATATAATGGGCATAAAAAAGCAACAAAATAAAACATGCAACTCA
AACCAATCATG
