Contig Data
morexGenes
Links



Map Locations of contig_211346 (5960 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_211346

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_30604 1 538 bp None Available Available None
MLOC_30605 1 705 bp MLOC_30605.1 Available Available None
MLOC_30606 2 1443 bp AK362524 Available Available None





CDS Structure of MLOC_30604






CDS Structure of MLOC_30605






CDS Structure of MLOC_30606






Contig Sequence (5960 bp)

>contig_211346 5960 assembly3_WGSMorex_rbca.fasta
ACCACACCTACACATATGCAAATAAGAAGTTAATTTGAGCTCATATTGGATATAAATCAA
ATAAACTCCCACAAAATTACTCCTCAAACTAAAACCCGCAAATCACTATACTTATAGAGC
ATTGCACGAGCTAATCTACCAATAAAAGATGAAAGGACAAAGTTGCTAACCTTTGTGAAC
ACTTTGAGAGATGGGGTGCCTCAAATCTTGACAAATTTTGATAAAAAATGGAGGATGAGC
TGAGCTAAGGGGAAGAATAGAGAGGGGAATGGAGAAAACAGAGAATGGGCTCGGTCTGGA
CGAAGGGCTTATATAGGCAAATCTTTAGTCTCGGTTTGTCTATCTAGTCCCGGTTGGTGT
TACCAACCGGGGACTAAAAGGGTTCGCAGGAGACCCAGCCTGCCATCACCCCTTTATTCT
CGGTTGATAACACCAATCAGGATTAGAGGTTAAAAATAAACCGGGACTAAAGACTAACCT
CATGAACCGGGACTAGTGGCAGCATTAGTCCCGGTCTAAAAGTCAACCGAGACTAATGCT
TCGATCCAAATGCCTGTTTTCTACTTCTGGCCTAGTGCAAGACAAACAAAAGAAATCAAA
ATGCTGCAAAACTCTGTTCATCTAAAAAAAACAATTGCAGTAGGCTAGAGTGCCCGATTC
TCTCACATGGGGGAGGAGAGATAGAGAGAAAGAGATAAAAGCACCCAGAGACTCCTCCTA
TCTCTATTAACCCGAGCAATTACGAACCGGACTGGTTGTGTTATTTTTCTTTGGGCCGGC
CTCCATCCGCTGGCATCGGGTGGGACGTTGTGCTGCGAACTGTATCCATTCGTCCATCTC
GTCAGAGTGGAGGGTCAATCTGAGCAGGAGGGAGCTTGCACCGGTTTCATCTGTGGTTGA
AGAGGGACCATAGCCGTTCCCTACGCTCGCGGTGGGTACATAAACGGGGATGCATGTGGC
TACGGCCTGCAGATCGTCAACTCATTGCTAAATTGCTGATACCTCTCAGGCCTAAAGATT
GCATGCCATTTTTAATGGAAACATGGTTACTCTCTTTTGGGACCAATAGCTTGTCAAATT
TTCTTGATGTGTTGCTTCACAGCTATGCTTCTTATTGAGACATGTCCGTATGCGTCTCAC
CAAATTTTATTCGCCTTTACCACGAGATGTCGCAATGAATGGTTAACTTAAAACAGTACT
GACCAACCATATTGCCAAGATATAATCAATATCCTGAAGAAAAAATAGTCGAATACTACA
CCCGACAAACATGTTATATTGAATGTACATTAATATTTAATACAAACCACATGGTATACC
AATTGCGGAAGTAGGTAAGAAAACATGATAAAATGATATTAAAATGCACCGCTTGGTATC
ACCAACTAAATAACTGATAGCAACAAGCGATATTTGCGTAGACCACACCACTCGCTTCTG
GATGAACAAATTTTAAGCCTAATAACTCGACACAGAATATTATTGAGATACAGAAAAAGA
GATGCAATGTGAAACATTAAAGTATCATAATCAGTACAACACCAGCACCATGGGTCTCCT
GAAAATTGTCCTTACTGTTCAGAGCAACACCAAAATTTATTATGAACACAACTCATGTAA
TTTGACTCTCCAAACTTTGCTAGCTGAACATGAATGAGTACAGCCAAACGGAACTCGACT
GCCACCACGAACTAGGTCTGAACTACACGATCTCGTTGGTAGTTAGGACTGTTGATTGAT
TGTTTCAGAAGACACATAACACATGAGCGCACAGAAATAACTTAGCAGGCAAGCATAGGA
GACAAATCTGCCAAACGCTCTATCATGGCGACAAAACTCAATTGCGCAGCAAGGTCATGC
ATGGCTGGAGCTCATGGGACATCACACCATTCATGCGCTTCCAGAGATGCTAGTACAGAA
ACTAGAAAGTCAAGCCTGATGCATCACACCATTGTTTTTGGGTTGGTAGCATTTGTGCTA
CTGACTCAGATGCCCTTTTTTTCGTCTGGTCTGACCTACTTGTATGAGGGTTTTCTAGCC
ACTTTGTATCGGTTTGCCACTTTCGGCTTTAACATGACATTTCCCTCGCTGCTAAATTCC
CACTACCTCTCAATCCTACATGCCACAAGCTGTTGTCTCTGAAAAAGGGTTGTTATGTTT
TTGTGACAACCTTTGTCAATATTTCTTAGGATACTGTTGAATACTATGCTCATTATATCG
ACATGTGGTGTGTGTGCAACGAATGGAAAATTGAATATGACTAGAGAGGCCAGACCAACC
ATACTATCACCATATACATTCTCCATAGTAAACTTGGTAGACCAACATAGTACACCCAAC
AAAAAACATGCTATGCTAAAGAGCAGCCACGGAATCAACAAATTTTTTACTTACATGGAA
TCAAAGAGATTTTGATTACACATGGAAAGTGAGTCACTGACATTTTAACACCATCCTACC
AAAGAGTAAGACATGAATAATTCTGCATAACTGAAAGAGGGAGTAACCGAGGAAGCAAAT
GCGCAATCATTGCTCAATTTATTGAATTGGGTGGCAAGTGCAAGCCAGCAGTAAAATCAG
CATGCTACAAAATTTTGTTCATCTTAACAACTACAGCAAAGGATATGTGAATCCGAAATC
TAAAAGGTACATGGTCGGTTTTATCTCTCGTTTCACATCACTTGAGCAATCAAGAAACAA
ATATATCGCTAATTAAGAGAATTCCCAGTACTCAAATTTCAAGGAAGTATGTCATGCCTG
TGATATTATTGTTTCTTGCTGATGTCGGGCTTTACCGAGCAGGAGTTTTCACCAACTGAG
TAGGCAGGTTCCATCCAGTAGAGAACATGATCCTCTCCATGGCGTACTCGCAGGTTAGGA
GGTCCAAATTTGATTGCATTTACAAAGCTGAAAAACAATAGGTGCTATTTCTGGATCTGT
TGCCTGGAGACCAAACACATGGCATGGGAAGCGCCTATTGCAACCGAGATGACACGAGGA
GGGCTTGGATCCTCGTCACCGTCAGCAAGAAAATTAACTTTAACAGGTAATGGTTGCACT
TCTGGAAGATCAGGAACGCCTAGCTGGCAGTCTCTTGCATTTCCCCACATGTACAAGTCA
CCTTTCTCTGGTCACACAAACAAAGTAAATTCAGGTAAGCTGCTCATAGTGAGAAATTTT
GATTGCTTGCATTTAGCTGACATGCAATGTGATGTAGAACTAGAACAAGGCAACTGAACT
AAGCTAGTTAAAACAAGAATGTTGAGAGAGACATCTTATGAAACGAATAAGAGGCTCTTA
CAGTGGCAATATATCTGGGTTTCGCGTATCAAAATAAATGGACTAACTGAATTTTAGTTA
CGACAATGGCATTTTTTCTTTATTACTCGAAAGTAATTAAGTTGTGCAACGCCTGTTTCA
TCAGCAATACATGCAATTAAATTTGTATGCAAAGAATCTACAAAACTAGTAAATCTTAGA
AATCCTTTCTTTCATCAGCAATACATGCAATTAAATTTGTATGCAACACCTGTTTCCTGC
ATAATTACAACAGTAACAAAAGACTGATTATCTGGCTGACTGGTTAACTCTAAGAATTTG
CTCTCTCATATCACAAGTACATGCCAGTCTTATAAACTATACAAAAGTCTCAGGTACTTT
CTTTTGCTCCCCAAATGGTTTTCAAAGTAGACAGTTTTATTCTCAGTTACTCGATGCCAG
GTGGTGGTGGTGCATGTTTGCCATTTCCTATGAATCTTCAGTTTAGACATTTGCGTACTA
CAATTCAGTAAAGAAAATAGCGAACAGAAGGTAGGTGAGGCTAAGAACATGTCAAGAGTT
CCCTGCACAGCAACAACCACCATGTTAAGACGTAAAAGAGAAGCAGCATTCACCTGATAT
AGCAGCGGAAGTTGATCCTCCACAGGCTATGTAGACAATTCGCTCCTCAGACAGAGCTTT
AATGGCAAGTGGAACTCTATGATTTTGAATGGTGGGATGCCCTAGTTGGCCATGTCCACC
ATGTCCCCATGAGAGAACTTCACCTTCATCTGAATAAAGTTAACAGAGGTAAGATATGTC
ACATACTTGTATGCTGCAACAACAAATACATTGTTCTGTGCTTCTATAACAGCAGTCATT
AATACAACTAAGTTTACATCTCCATGAATATAGTGGCATTATACTGATGGCTTGCTGTAA
GATCCAACAGAACTTGATTCATGATCAAATGTGATCTTATGATTGAAGATCATTATTGCA
GTCAAAACCAGCAGTAGGCTTAGTTATCCAACTTGCTGAGACAAAGGCAAATGTATATTC
CTTTATAACTCCTGTCTGAATGTTTGTTTTCAGAACTTCGATTGCAAATTCTAATTTCTC
CAATGTAATGTGTTATCAGATTTTGATAGGAGCCTGAATTTCGAACAAGTAAAACATACC
AGTCAAGGCCAAAGAATGGTATCCACCGCATGCTACTTGGATTACATGGACATTTTTGAG
GCTAGGGACAATTTGTGGCCTCCAGTCACTCGAATTGCTTCCTCTTCCCAGTTCGAAGTT
TGAGTTTGCTGAAGATCATAGACAAGTTGTAGAAACTCAATAAATCCATATTAGATGAGA
TGCATTTCAAATTAAATTAGTACATAAGTCTCTTATGACGGAACCTGGAAAGCCAGAATA
AAGACGTTGGGGCAGTTTCTTATATTTAGGAATGGAGGCAGTACTAAGCAAGATCGTTGA
GATTAAGGAAGCTTAAGAGCATTTCAGAAAATTATCATAACCCATGTAAGTGTAACTTAT
GCCCAATGGATGAAATAAAAGGTCTGGGCATGTAGTTGGAGGGAAAATGTTGTGCATAAC
CCACAACATTTCACATTAGCGAGAACCTTGTAAACTCATAATCGCAGCTTAATATGAACT
GCATGGTGTTGCATTGCACATTAGCAGCAAGTTAAGTCACAACTGTTTCCCTAGTTTTGT
AGAAGAGCATCAGTGCAGAATAAGTTAAATACATGGTGTTTACTAGTTAATAAATTAATA
CACAGTGACGTTCTCACCTCCCCAACTCCATAGCTGCCCATCCAAGGTCAGCGCCAGGGT
GAAGAAGCCACCGCAAGCAACTGCAGCAACTGGAACAGGCAGCGCGCTCACCTTCGAAGG
AACACTGAGAGAGCCGGCTTCACCTGGACCACCCCCACTCCCAAGCCCTAACCTTCCATC
GCCTTCATCACGACCCCAAGTGTAAAGTTCACCTGTTACAAGTCATCAAAATGCAAGGAT
CAGAGTGGAGGGAGTTTGATGAACACAACGACAATATTTCAAAATGACAACATTAAAAGT
TCTATTTTCTTTCATTTTCTCACACTATTCATTCGCACAAGGAAGTACAGTAACCAAAGA
TAAATAAAAAGTGTATGCCCGGATTAAGCGTGGATAAGAAGTTATAAACAACCTGATTCT
GTGATTGCCGCAGTATGCGCTCCGCTCGTGGCAATGTGCACAATCTTCCCTTCCCAAGGG
CCGTTCACTTTCCTCGGCAACAGCTCTCTATGGTAAACGTAGTGCCCCAGAGCTCCAAAT
CCACCATAACCCCTGCAGGCTACTAGAGTAAACTGAGTGATGCAGCAGCCAGCCACAACC
ATCGACCATCACAACCAAAATGCAGCACATCCTTCTTCTCGCAGTACATCCGGCATCAGT
GAAATTTTCGGAATGAGCGAGCAATGTGGGAGCGTCGTGTCCTCACCAGGTGAAGACGTC
GCCGGAGGCGGTGAGGGCGGCGGAGTGGATGCCGCCGAGCGCGAGGACGCGGAGGCCGGC
GAGGTTGGGGTTGGCGCGGGGGACAAAGGCGGAGGCCTCGTCGCCGAGCCCGAGGCGGCC
GCCGTCGCCCTTTCCCCACACCCAGGCGGCCCCGTCCACGAGGAGCGCTGAGTGGAAGAG
CCCGCAGGAGATCCCCACCT