morexGenes - Barley RNA-seq Database

Contig contig_210375

Source Contig contig_210375

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_210375 (2057 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_210375

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_30508	3	655 bp	MLOC_30508.1	Available	Available	LOC_Os05g47550.1, FRAME:-1, EVALUE:5e-43, 13105.m05041 protein ANTH/ENTH domain containing protein, putative, expressed
MLOC_30509	1	227 bp	MLOC_30509.1	Available	Available	None

CDS Structure of MLOC_30508

CDS Structure of MLOC_30509

Contig Sequence (2057 bp)

>contig_210375 2057 assembly3_WGSMorex_rbca.fasta
ATCTTGACCTTGTTTGGATAAACGCTTAGCCTCAACATCTTATTTCAGGATCCTGAAGCA
TTCCAATCTTTCCTCCAAAAACTGACCATATGTGTGAACCCATGCGGAACAGTCCCAAGC
TGGACAACACACAATCAGTGGTGGAGCTAGCAGATTCACAAAGCCTAGGCACACCGCAAA
CTAGAGTACTCCACTTTGGTCTATAGAGAACCACCAAATCAGATAAATGACATGTACCAT
ATGGCATAACAGCATAAGTGGTTAGCAAACTCCAAATTCAGATAGAATTAATATTTGTCT
ACATGATAAGGGTCATGCATAGTATGCTCTAATATTCCCTAGATCAGTGATGTACATGAA
ACACGAGATACACCAGCAAATAAGATGCTAAACTCTAGCCACACAACCAATCTAATGTTG
ATTCCACTTGTGAATTTATTTGTGTTGACAAAAATAACCTCCTACTTTCGAGATTAAAAA
ATTTAAATAGAAATTTGGCTCTACGAGCATTCACTTCCAGGATTCTTGATAAATTATAGA
GAATAGCGTGGTGTCGCAGTATCGGTGGCCCTTGTCTGTTGCTTATTATGGCCTTGTGCA
GGTTGAGAAATTTTTGAAGCTGTCCATGCTGCTACTGCAATATGGTGCACAGACGAGCCA
TCTTCCTGTCGTCGTTGATGGTTGAGCTAGCATGGACATATCATGGAAAGGAATAAGCTC
GCTGCCTTCCCGAGCGTGTGGCCTTGTATGCTGGATGCTATGGCCCAACAAATAAAAGCT
ACCAAATGGGCCTATGGGGCTATTCAATTGATGCGAGAGGCAGGAAATGGACTGGCTGGG
CAAGTTACGTTACTTATGTAACCCTTCGTTCTTTTTCAACAGAAATCGTGGTTTCTCATG
CTTCAAGCCACTCTGACATCTTCAGAAGCTCGCCCAAGTTCCAAAACGCAGAGGCATCGA
GCCCGGGCACGTGACCAGGGTGCCCTGGACGGTGAAATCGCCCCTGCACACAATCTTAGT
ACATGGGGAAATCAAAGGATAATAAGCAGGCCAACGGTATTTCCTACCAAATGAAGAGAT
ACTAACCAATTGGACTGGAGTCATCCTTGAAGTTTGAGAGCTACAGAATACGCCCCCTTT
GTGTAAAATTAAGAAGCTCTTCCCGAAATGTAGGGTCCCCCTCTCGTAGAAGCCTATGAA
CCACTGCAAGTGTCTTTAGTGCTACCTATACGTTACAAGAGAAGGGATGGCGAAAATCAA
TTGACTGCTTATAAGATTCTGAAAGATTTCTGGATTTTGCCTTTTTAGAGTGCAAGCTTT
ACTTGATAGTTGATATTACTAACCTAACTATGCAGGACTACATTCACAATCATCACTTTT
GGCTTTATGAGAATACATCACTTCTGAATTAAATGATGGGAGTTGAAACAACCAGCAAAG
TGGAGCAATAGTGGATGCAGAATCGAACCCTGACAGTTCCCCAAGAAGGACGAACCCTGA
CAGTTCCCTAACGTTCTCGGCGGGGACTTGCAACAGGACGTGGAGCGTACATGATGAAGC
GTGCGCGCGGCGACGGCGGTGCTTGTAGATGGAACGCGCCCTCCTGCTGCCGTTGCCGTC
CCATCGGTGCCATGCTGTAGAAAAGGGAATGAAATGAGGAGATGGTGAGATGAGGTGGGG
AGGGAGAATCTGTGCAAGGAATGAGTGGAAGTACCAACCTGGGATAGCCCGGTGCCGGAT
CCGCAGGCTAGTGGACTCGCCGTCGCCGGAGATGAGGTGGCGGCTGAAACCCTAGCTAGC
CACGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGAAGGAGGCGTGGAG
CTTGGGGAGCTCGGGGGAGTGCTTCCCATTGTGGGAGCTCACCGGAATAGGCCAGCGTGG
GTGGTGGCGGTGGTGAGGGAGAGGGGATCGTGGTTACGAGACACAGAGGGGGGGATGACG
CTGGAGTTTGGTGGGCTCTCTCTCTCTCTCTCTCTCGTGGGCTCCTTTTTTTCCTTTTCT
CTATGGATGGAGGGAGG