| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_208869
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_30372 |
1 |
1092 bp |
None |
Available |
Available |
LOC_Os03g52880.1, FRAME:-1, EVALUE:1e-49, 13103.m05768 protein BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| MLOC_30371 |
1 |
462 bp |
MLOC_30371.1 |
Available |
Available |
LOC_Os03g52880.1, FRAME:-2, EVALUE:1e-15, 13103.m05768 protein BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
CDS Structure of MLOC_30372
CDS Structure of MLOC_30371
Contig Sequence (2221 bp)
>contig_208869 2221 assembly3_WGSMorex_rbca.fasta
GCGGTACTACCGCAAGCCCCAACGGTACTACCGCCAGGCCTGAGCGGTACTACCGCTAGG
CCTGAGCGGTACTACCGCTAGGCTTACAGAAAGCCATGGTTGTAAAAATACTACTACCGA
GCCTACCACCATTGAAAAAGTATTCGCAAAAAGTCCGACGAAGTACAACCGCTCAGAGAA
GGAGGTACTACCGTCCCCAAACGGTACTACCGCTCGATTGGAACGGTACTACCGCTTAGC
TAGCGGTACTAGCGCTCATCTGGAGCGGTACGAACCGCTAGCGAGCGGTACTACCGCTCA
GCTTGAGCGGTACTACCGCTGGACCCTTTGCAAATGCTAGCAAAGACCAAGCGGGTTCTC
CATTGCCGCAAAGAGAAGGTGGTGGAAAGAAAATGTGCGCGTGTGTGAGTTGATTTCACC
CAAACCTTTCCGAGGTGGGCCCCCTCTTAATAGTACGACTTTCCTACTACTCAACACTAC
CAAAGAGAACCGTAGGAAACACCCTCCTCCAACAACACCGAGGGGCGACGAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTAGTCCGCAGAGGTGCTGT
CATCAATCACCAAAACTGCTTAGAACAAAATATGCCCTAACACTGCGCCTTCCGCTCGCG
CCCTCACGTGCCGCACCCTCACAAACTGCTTCCTGTTCGCAGCTGAACATTCGTGTTCGA
AGGGATGAGAGATTTGGCGCCGATCATCCTACGCTGCGCTCCACTACACACCAGCATGGT
TCGACCATGGGCTCATCCATGGACGCCCTGGACACGACCGCGTCGCGCGCCTGCGAGTTG
CACACCCGTGTGCTGAACTTGCATCCGTACCGTGGCCACCAGCTCGCGGGGACGTGCGCG
ACAACGATCGCGTCGCACGCCTACGAGTCGTACACCCCCTGATTAACTTGATCGCCCTCC
ACATGCTAGAGCACTCCTGCTTCACGCCCTGCACCCGGCTCCTCATGTCGTCCATGTCCA
GCCGCAGCACCTGGCCGTCGTGCACCGTCGTCGCCCTCCACGTCTCGCTCGGGCCAACCG
CGTGACGCAGCGCCATCGCCGGCCGCTGCGACCGCGGATGCGGATGCCCCGCTCGTGAGG
AAGCCTTGGAGGCCAGCAGCGTGCCCATGATGGTGCGTCTGAGCTGCAACTGCTGGAAGA
AGAGCACATGCAACACCGCTCGCAGAATTTGGCGGGCTTCAGGTTGGCGTCGGACGCGAC
CTTTGCGAGGTAGTTGTCCACCAGCTTGCCCACATGCACCATTGCCATGGCCGACGGACG
CCATGTTGATGTCGTCGCTGCCGCCGCCGCCGCTTCCTCCTCAATGATTGCAGCTGAGGA
CTATGCCTCGTCCTCGCAGACCTCCTCCTTGGCCAGGAAGTGCCTGACCACCCGCTCGAC
GTAGTCCATGTCGTAGAGCGTCTTCGCGGAGCCGGAGTAGCTCGAGATGAGCACGTCCTC
CACCGTTGCATGTTCCAGCTATGTCGCGGCCTTTCGCTCGATCGCCGCACACGCCGCATC
CGACGTGCGTAGGATGTGCGTCGTCCGAAGCAACACGAACAGGAACTTCGCGGTCACCAC
GCTCCCGGAGCCCTTGTCTGCAGAGAGGCTCGCAACCAGCGGTGGTCACCTAACTTCGCA
GTCACCTAACACTACTATGGTGTCATCCTACCACCACATCATGTCATCCTACCACCGCAA
GTTCACTATCTTCATAAAGGGTTAGTATATACTACCTCAATAAAATATATAGACCATCAA
ACAATTTTTCAAGCCCTAACTACACAAAATTTGCATCATCATCGTCGTCGTCGTCGCCGT
TGTCATCGCCATCGCATCCAGGATCATGCACGCGGTAACCAACATCAAGCTCTAGTAGTA
GTGCTTGTCCAGTCAGGTCCCGAGCGAGAGCTTCCCATGGGCGTTTGCCATGGTAACAAA
CCCAACACCCTGCGCCTTGTTCTCCAACAGGTGGCTCAAAACTGCCATGAGAGCCTCATT
GTTGAAGCCACCTTGCTCCATGTCAGGGTGGACGTCGAGGGTCTTACTCTCCCTAATGAC
GGTTGGCACCTCCTTCACGTCCATAGTCATGCTTGTGAAGACACTGATCTCATCCTTCAT
CAGGCCGCCCCTCTTCCTCTTCCTATTGAGCACACGAATATGTTGGGGAACGTCGCATGG
G
