Contig Data
morexGenes
Links



Map Locations of contig_207817 (4996 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_207817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_30262 1 533 bp MLOC_30262.1 Available Available LOC_Os08g37180.1, FRAME:-1, EVALUE:1e-41, 13108.m03909 protein patatin, putative, expressed





CDS Structure of MLOC_30262






Contig Sequence (4996 bp)

>contig_207817 4996 assembly3_WGSMorex_rbca.fasta
TCGACCATGCATGCAGACGCAGGAGATTGTTTTAGGTAGATTTGTATACGTGCATGCGAT
CTCTGTACCTGGCTTGAGGGAAGATACTCGGGCAGTGGTCGAGGTAGAACTGGTTGATGT
CCTTGGCGGCGAAGAGCGGGCGGCCCGCATCGTCGGGCGCGCTGAGCATGGCGGTCACCA
GCCCGCCGGTGCTCGTCCCGGCGATCACGTCGAAGTAGTCCGAGATCCTCGCCTCCGGCC
CGTCAAGCTCCTACACATATATATTCATGGCAACTCATTAGAACTGGTACTGTGCATTAG
ATCACACAAAGCCAAACGTGCGTGCATGTAAGAGGATTTAACTAGGGGTACGTACCTGGA
GCTTCTCCTCGAGGAAGGCGAGGATGGTGCCGGGGATGATCCCGCGGACGCCGCCGCCGT
CGATGCTCAGCACGGTGACGATGCTCCCGTAGGAGGGCGGCGGCGACCTGGGGCTCCCCA
GCGACGACGATGCGCCGCGGCAGAGGACACGCTGCGCCGCGTTCATCAGAATCCGGGGCC
CGTTGCTCCTCTTCCCGGCCCCTTCAGCTACTTGCATGGCCGGCGGCATGGTTGGTTCGA
TCAGCTGGCTGGTTCGATTGTCTTTGGCACTTTTTGTGACGACGGCGTTGTTGTTGATGG
TGGTTGAGGTGCACGCCTGTATACCATATTTATATGACCGGTCACTAGGAAAAGTCGTGC
TCCCCGCCGGAGCGCCGGAAGCATCGTGCATATGCCGGTGGTCATGGCCGCACCGTGCGA
CGAGTCAACAAGTTGAATTGAAGGAGCCAAAGACGCGGGGGCTGGCGGGCTCCGTGGACC
GTTAGGACGCACGCGATGACACTGGAGAAAAATGAATCTAAATTGTTTCCAGTTTCCATG
GACCATGGCTGGCACGAGCTATTCGTCCACTATATTTCGTGTGGCAGGCTCTGCGTGTGG
TGTGAGTGGTGCTCCGTTCAAGCTAGGGACACGTACGTACCGACAAGGTACTCATTCTTT
GTTGTTTACCTGGTCCGTTTACTCTTTTGGAATGTTGGATGGGTATAAACGTTTCTACGC
TGAGAAGTTTCTCCTGCACGAAAGATGTACGGAAGGCTCGTGCAGCTAGCCGTACGTGCT
TCCTCCTAGAGACGCCGTTCCGTGGGTTTCTTTGGAGGTGAAACTAGTACTCCCTTCGTT
CAGAAATATTTATCATAATAATATATATATCTAGATGTTCTTTATTTTTAAATGCATTTA
TCTTTATTTATTTATACGACAAATAATTTCGACACAGGGAGTACAAGCTACTGGCCGTAG
AAAACTACTAGTGCCGCCGCGCCATAAGGATTGATAAGCTATGCAATTTTCTTATAATAT
ATGGTAAGTGATCGACGGCAGATTACTTTTTTACTTATGAATCATGCCCAATTTATTTCG
TAGATCATGACAAATTTTCGTAATTCATCATGGAAGTTTAGTTTCTTAACTCCCTTTTTC
ATACCAACATGTCAAAATGTACTTGAACGTAGAGGAAAAAGTAGTTGAAATATAAAATAT
ATCATTGGCAATTTTAGTGTAATCACGATGACAATTTATGTGCAATAGACATGGCAACTT
TTCAACAAAAAAGCCATAGAAATATATCAATATGAGATCTAGTTTTGCAGATCTCGCCGC
GATGGATTTTATGATGAAAATGATCTGTCAGTCGAATTTCTATGTAAGAGATTTAACATT
TTAAAAACTAAAAAGATGAAAGATTCCTGCTGACATTATTAGTTTCGTCATTTAGGCATG
CATGGGTGACATGACCCACTCTTTGATCATGGGGCATGCGGGTGTTACATCCATTACACG
TGTGGTGGTTATCGACATCCTAGTCTTTCTCATACGAATGGCTACAGTCTTACGTTGAGA
ATGAAGCCTGCAGACTCCACTTCTCGAGATGGTAGATGGAATATAGAGCTCCCTCCTTGT
GACAAAATTCCCTCCCTCCGGCAAATGTTTTGCATCTGGGGAATTTCAGGATGTATGACC
TACCTTTCCAGCCCACACGGCACCTCTTACTCATGTAGTGGGCCATTTGCAAATATTCGT
AGTTGTGGACGGGCACCATGGTGCCCGTTACAAAAGTGTTTTCTTACTGCATAAAAAAAT
TCAAAACTTTTTACAAACACACACACGCACACGCATACATACTACATATGTGCAAAAATT
CATTTCATTTTACATCCATACGTGGCGTACAAAAAAAAAACAAATATGTATTTCCAAATG
GGCCAGAATGTTTTGTTTTTGGGCCGGAAATTTTTTTATTTATTGTACAGCTTACAAATT
ACATTTTTTTTTCAAAGCAAAATTTTATGGATCAGTAGTGAATACATACAAGTTTACACG
GAATTATTTTCAGTATGTTTTGAAAATTTAATTACGGTTATTTATTTTTTTAGAAAAAAA
GGGCATCATGACATGATGCCCGAGCACACAAACTTCGCTCTCTGCCATTCGGGCCTACTT
GCCGCTGGTAACCCAGTGGCCACATGTCATGAAGGATGCCGGCGTGAGGGGCGTCGTTAA
GATCTGAAGGAAAGGGATCAGATTGTACTGTATAAATGACATCAGACTTTTACCCTACGA
TACGATCCCGATCGAACGCATCGCAATTACTCGCTGCAGCATGGCGATCTGTTTTTGAAT
GGCAAATCTGAACGTTCGCTGGCAAATGATAAAAACCTGACGTCAGACAGCGAGGAACAA
GATGTTGATAGCGAAAATTAAGGATGGTTTCGTATATAGGTTGTTCTGTAGTGTCAAATC
GTTCTCTAATGACTTGAGTTTGCAAGCTGCGCTCTATGATTTTCAACGTTGATAATGTTG
ATAGATACATACTCCAGGTTAATTCCTATTGTAGTATTGTCGTAACTGCGGGTACGTACT
TGACTATATATATAAGGTGTGGCTAGGCCTAAGTCGACTGAGATTTAATCAAGTCTCAGT
CAAGTGACATAACATGGTACAAAGAAAAAGAAAAACCGATATGAAAATTTTGCACAGATC
TCAATGTAAGATCTCATGGATCTAGCATCGACTGAGAATTAACGAAGTCTCAGTCGACTG
AGACTTAGCAAGACTGATATATATATATGGTGATACATACTCCAGGTTGGATCGAGCATC
TGGAAGGATACATGCTAGCTCCACTTCCGTTAATTACTCGATATATAGATAACTAATAAG
CCGATCCATGGATGGATCGATGTCATGTCAAGGAAGGAGGAGGCCCTTGTCCTGGAAGCT
CTTGATGCAGTCGTCGAACATCTGCTGGATGGAGAGGAATGGAGGGAACCCCAGCGCCTC
CATCTTGCTCGTGTCCATCTTGTGCGCCCTGTCGTCCCCCTTCCCGCTGCTGCACCTGTT
CCATTCCATCACCATGCACACGATGCATGCATCCATGAGTTACGAGTACATGCATGACTA
TGGCCAGCTAGAGCAAGGAACCTACTCTGTGGGGATGGGGTACTGCGGGTACCGCTCCCG
GAGCGCCCCGAGCACCTCGGACCAGTGCGCGACGTCGCCGGAGCAGATGAGCCTGCCGGA
CGCCCTGCCGTCCTCCATGGCCAGGACGTGGGCCAGCACCACGTCGTCCACGTGCACGAA
CCCGATCGTCGTGTTCGGGTACTTGCCGAGGTCCCCCTTGAGGAGCGCCAGCACCACCAG
CGCGGTGCTCGTCGGCGCCGCCCGGCCCAGCACCGGCCCGATCACGAACGACGGGTTCAC
CACCACCAGGTCCAGCCCGTGCTCCGTCGCCAGCCGCCACGCCTCCTTCTCCGCCACCGT
CTTGGCGTACGCGTACCAGAGCCCGTACGTGCGGCAGTAGTCGGCGTCGCTCCAGTGCGA
CTCGTTCAGCGTCGGCGGGCCGCCGCCGTGGTGGCGGTAGCGCACGCAGGAGCAGGAGGA
GGTGAACACCACGCGGCGGGGCGGGACCGCCGCCCGGGCGCAGGAGCGGAGCACGTTGCC
CGCGCCCTTCACGATGGGGTCCACCAGCTTCTCCTGCGCGTCCTTGCCGTCCTCGTAGCT
CACCACCACCGGCGACGCCGCGTGGAAGACGCCGTCGACGCCGCTCACCGCCGCGTCGAA
GGAGCCCTCCACCAGCAGGTCGGCGCGCAGCAGCTGCAGCCGCTCGTCGGCGCCCTCCAG
CTCCCACAGGAACCCCACCTTGGCCTCGTCGCTCGGGTCCCGCACCGTGGCGCGCACCGT
GTGCCCGGCGGCCAACAGCGCCCGGATCAGGTGCGACGCGATGAACCCCGTCCCGCCGGT
CACGCAGTACTCCGGCATCTTGATGTATCGATCGACCTCCGGCTTCGGCTGGTGTTAGAA
GGACATGCATGCGATGGGTGCAGATTTATACTGGTGTGTTTTCACCATCGATCGATCGAT
GAATCTGTGGGAGGCGGGAGAAAGAGAAAGAATGCGATGGGCGGATCAGTTGGCCGGAGC
AAGGCAACGCAAATGTGGCGCCATGGAGTTCGGTTTGGATTAGGTTGAACATCAGGCATG
CGTGGGCTACTATTCTTCTATACACATGCGTACGTACGTATGCATGGACATGTAGCAATC
TGAACATCACGCATTATTAGTTACCAACTTATTGAATTACCTCAACACTAGTCGTACAAC
GCAAAAGTGGTTTTGGTTACCGAATGGGGGCAATTTCACTGCGGGGGCGGTAAGCGTGGT
TACAACGAAATTTTGAATGAAATTTATAAATAAATTTTGAATTCAAATTCAGTCAAAACA
GATAAAGATAGCACTTGAATTTATATCTATTATAAAAATAGCTTCTAGCTCAATGGACGT
TGTCGTCTTGTACTTATGTATAAGGACGTGGCTAGGCAGCGCATGGGTGCTCGATGGAGC
GTTCCGGTGCCCTTCCATGATAGATAAGTGTAGTCTAATCAAACCTCTTTATATGGAGAG
AATTCCTTATTTGGCC