Map Locations of contig_205133 (5371 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_205133

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_29946 1 707 bp MLOC_29946.1 Available Available None
MLOC_29945 2 1823 bp AK250053.1 Available Available None





CDS Structure of MLOC_29946






CDS Structure of MLOC_29945






Contig Sequence (5371 bp)

>contig_205133 5371 assembly3_WGSMorex_rbca.fasta
CCACCACCACCTAAGGTTGCACGACACAAACAAGAAGTCAGATCCGTCGCTCGGAGGTGG
ATCAAATCAAACCACATCAAATCGTCATCAGAGTATAGCAACAATCAATTCAGACCAAAA
ACAAGGATTGGAATCTTGAATAATCAATCGGGGGGGGGGGAGCCACGGATCAGATGCTTG
AAGCACAATCTTAACAAGAAATTCGCCGGGACAAACAAAAACACATCAAGGATTCACCCC
AGCCAGTCCCCATCAATTAGCCCATGGAGGCGTAGATCTCAGCCGACCCACGTACCGCAT
GCGTGTTCATGGCATGGGGCTCGTTCCATCTAATGCCCACCAAGACAACGCGGTGTGCCC
AAGCTCATCGCCCATCGACGTGCACATGCCGCCACAAGCGAGGCTCGCCCAGGAACATGC
CTGCTTGGATTTAGGACAAAGGGGGCGATTGAAACTCGGACGACGTTTCTAGAGGCCGCA
GCCTGGTGCTGGAGGCGGCGACTGAAACTCGGACGGCGTTTCTAGAGGCCGCATCCTGGT
GCTGGAGGCGGCGACAGACAGTGTACTCAGAGAGACTCGACGGAGGCTGGGATGCGTGGA
TGGAGCCAAAGATATTGTACGCGTGTTGGCGGCCATGATGGTGAGGCGGTGGCCATAAGG
CACGTAGGAGGCACGAGAGGATAGATTGAAAGAAGGGGGAAGAGAAGGGATGATCAGTGG
GCGACGAAACTGCTTCCCTATGACCCGATGGGTTGGAAGCGGGCGGCGTACACGGGAGAT
CGTGGGCTACCATCACGAGGGTGAGGAGATCCGGAGCTAGAGGTTAGGAGAATACCGGGC
TTGGGTGGGTTGCGATAAAAAGATTTGACGAAGCAATCGTGCGAGGGGTCGATAGGTGGG
AGGGGAACTCGTGCGAGGGAAAGGGAGGTCGAACCATCACCACAGACGACAGATCCTTTA
ATAGTAAAGATTTCGTCCAACCTTTACAAATTCAAGGTTTAAAATAACTTTTTCAAAAAA
AAAACATCAGACACGATTCAAGACGTACCGCGTGCCGTGCCTGATTCATGACGGGTCGTG
TCGGCATGCTCTGGGGGCTGGCCTGTTTGGTCCGGTTTGTTTGACCAGCTCTGGCTCCGA
CAGAAGCCTCGAGCAGCTGCCGTCGAGCGCGTCGGTCTCCAACGTGGCGGGATCCCACCT
TGAGCGGTCCTGCAGGCTGCAGCCTTTGCTGCGAGCGAACGGCAGGTCGGCACCGCGCAG
CGAGCGGCGTACACCTCACAGAAGCGGCCCCCGTCCCCGTGTCACCGCAACACATGTCCT
CGGATAGCCGACGCGCCGCGGTGGGGGCTCGGCGCCACTCGCGGGTTGCCACGGCGCCAC
TCGGTTTGAGACTTTGATTGAAGACGTGGGCGCCCGAGGCCCGTTGCCTGCGCGCTCGCC
AGAAAGCGCCAGGGGCGAGCTGAACCGTGCGGAGAGAATATCCGGTGAGCAGTTCTGGAC
TAGCGGCATCTCGCTCATCGCACCCCTGAAAATTCTCATCAGATGCCATGCAAGGGTACG
TGCAATTTCTGTAGCTGATCCGGCATAAGTTTGCTTGTTTGTTCGACGGCCAACGATCAC
GCACGCCTAGCCGGTGAGCCATTTAACACAGAAGGGGTGTGGTTCAACGCTCTATTTTTC
TGGGTATCTATTTAAACACGCTATCCCACTTGACTTAGGTATAAAATTAAAAACACGGTA
GCGTGACTTATATTGCGAATTAGTGCCAAGTCTTGTATCTTCACACCAACGCTTTTCCGG
TCAAAGTGGCCCGACTTTGCTTTACAGTATAGCCTTCATGTCGCCCTCAAGTTATATACT
GTGTTTTCGTTTCACGAGGTAAAAAAGTACTACTTGTACTCCTATACAAATACAAAACGA
GAAAAAGAAAAGACGGACAAGCAAACGGAGCCGAGGAAGAAAAGCTATCGATCGAAGGTA
GTAGTAGTACCGTGCCCTAGTTCCCAACTCGGACGGACCCCGTCTCTCTCTTCCGCCCTC
CACCGCTCGTTTATATTTGCCCCGTTCCCCACCCCGCACGGCCGAAGCCGCCTCCCTCCT
CCCCGTCCGCCTCCGTCCCTCCACCGCCAAGCCCAAAGAGAGAACCGGAGACCACGGCCC
GGCCAGCCCCTCCCCATCCCCGACCCCGCGCCCTCGCTACTACATGGCAGCTCGGCGTCT
CCACGGCCAATCCGACTCCGAAACCCTCAAGAACAACCCCTGCTTCTGCTTCTGCTTCTC
CGGCCCTTGTCCTCAGCCGCGCGCCGCGCATCTCGATTCCGCCCGCGCCCGCTCCTGATT
GGTGCTCCGCGTGCGCCGTGTCCTGACCCCTGACCGACTCCCGCTGCGCGGCTGCTTGCG
CGGCGCCGCTGGTTCCTTCTTGCTGCGATTCTCGTCCGTTTCGTGATTCCGGTTTCCTGC
TGCCCGGCCGGCCTCGCCATGGGGAAGAGTAAGTCTTTGTTTCGCTGGCTGCTTGTTTTT
TTGCTCTCTTTCCTGCTGGGTGGGTTGATTTGGCTTTTGGGGTGCTGATTCTGATTGGTT
TTGGGGGGCTTGTCTTATTCTTCTTCTTCAGGTAAGAAGAGCAAGGTCCGCGGCGCCGGA
GGGGACGACCTTCTGGACAGCAGCGACGCCGACAGCGTGGGATCGTCGTCCACCGCGCTC
TCAGATCTCTCCATCTCGTACGCCACCGAGAACGTCAACTCGCACGAGTTTGTTCTCGAC
AAGTACATCGACGCTCTCTACGAGAAGAGGTGGGGTTCTCTAGCATTTCTTTATTTATGT
CGTCACTGCAGCAGCAGTCTTGTGCTATGCAAAGGAATGTGTCGTTACTGGTGTGGTGTA
ATAGCATCACAATAGAGTAGAATGATGGTTTCGCAGCTGGTCCTTGTTGGCTGACAAATG
TTGATTCTGTGGATAGATTAGGATGATGTTGTTAACATGACATTTGATATACCATGCTAC
ATGGCTTCATGTTGGACTAGACCCTCTCCTTTACCTGTTGGGTTTTGCAAGAACTTAGTA
GCTTGGACTATGTCTACAAGAACTTAAGCTATGAAGATTGAAAAAATGCATTATCCTGTA
GCTCATGTTATTATTACCTTCTGGGTCATTGTGTTATGTTACAAAGTTATGGCAAGTTCT
ACTCGGGAAGGCTGTCATAGGTAGCTCGTTTATGAAATTTGACTTCTAATAAGTACTACT
CCGTCCCATAATATAAGACATTTTTGCAAGCTAAACTAGCTTGCAAAAACGTCTTACATT
ATGGTACGGAGGGAGTAATAAATAAGAGTATGCCTGTGTCTACAAAGTTTAACTTATGTT
TTGGTTAATCGGACATTCTACCCATTGCATCAGCACTGTTATGTAAAACGTATAAGTAAG
CATGTTGGTTTTATTTAGTGTACTCAATGCAGTATTATTTATATTGGAGCAGGGGGTCTA
CAAGAGAGGCAGCGTTGGCTTCGTTGGTTGATGCTTTCGAAAGTTTTATGCTTGATGGTC
TTGTTGAGAACAAGTAAGTTACTACATTCAACTAACCAATCTTAATTGTTGCACGTGGAG
TTAGTAGTAAGTAGTAACTTCATGTTAGCGATAGACATACTGGACATTTGCATATTTCAT
ATGAACAAAAACACTCCACATCTCAAGCTCAACATTTTATCACCAACCTTTATCATTTTA
CATTCTCTGTCATTATGGTGGCTCACCCTTAACTAGAGATGTGAAGTGTTTAATCACTAA
CCTTAATCCACTTTTTAATGTTGTTACCAAATTTATTTTCTCTTCTGAAGATATGCCACT
CTACTGAGTCTATTCAATACTTCGATCAAGAAGGGATCTATCAAGGAGGCTTGCCTGGCA
TCTCGTGCCATTGGTTGGACTCCTATCCATTAATGTTCTTTCCCCAGTTCCACCTCATTT
GGAGTTTGCTTACACCGTTTTTGGCTGTTGTATTCTTGATTTGCAGGGTTACTGTCTATT
ACACTTGGTGCTGGGAGTAGCTCACATGAAACAATGGTAGACTCACATCCACAGCTTTCT
AAGGTCCTTCAAACCTGGTCGGATGCTTCAAAGATGATCTCTGTAAGTGAAAGTTTTTCT
GTTCTTCTAGGCTTCCAGATTTTGTTTACATTTTTCAGCGTTGTGATCTGTGTTGACCTG
TTGTAGGCTCTTGAGTGCTTGGCCATCATCACATTTGTTGGTGCAACTGATCTGGCTGAA
ACAGAGTTATCTTTGAAAGCCATGTGGGATGTGATTCATCCAAAATCAGGTTCAAATGTA
TGTATAGATGCCATTGATTTATTACCAGATTCTGCAAATTGGTTCTACGAAGAACTTTAT
TTCATATTTTTGTGATTCCTGACTTACCTGCAGGTTGGTACTGTCCGGAAACCAAAGCCA
CCTGTGTTAGCAGCTGCTCTATCTGCATGGACGTTTCTGCTCACAACTATTGGTTCATGG
CGGATAAACACTGATAGTTGGAAGGAGTCAGTAACACTATTTCTCTCCCCTTTAAATTAT
GGGCTTTCTATTTTCGTACCCTTGGTTTCATAGTTGTGCTCAGTTTTGCCCCCTTCGAAA
ACTCAGCTCAGTTTTTCGTTGAGTTAGGTCTAAAACTCTACGTATTGTTGCATAGTGCTT
GTCGTTATAGTTCCAACAACACTGGTTTCATCTTATTTGGAGCTTGGATGCTTAAGTTAC
TGCGGTTTTGGTTTGCGTTTTTTAGCCTATTTCAAGCCGACGAGGGCAAAACTGAGCAAA
ACTAAGAAACGCGGGCATGAAATAAATATTTCATTATTTACTTATTTTATGCTTTTACTA
TTTGCCAGGCCAATCGCGTTTCTCTCTACTCTTCTAGGAGCAGAGGATCGTGCTGTTCGG
ATGGCTGCTGGTGAAGCATTAGCTTTGTGCTTTGAGCTAAATCTACTTGATGTCTCCCCT
TCTGAAGACGATGATGATGACACTGGAGTACCTGGTAGTTCTAAGGGCAAACTTTTCCTG
GATATGCAAGCATTGAAAGCCAAGATAGCTGGTCTTGCCTCAAATCTCTCTGCGGAGGCA
GGGGGGAAAGGTGCAGACAAGAAAAATCTTTCTGACCAAAGAGATCTGTTTCAACGGATT
TTGGATTTTGTCAAGGTCTAGTAATCTAGTTGATTTTCATTCTTATTTGATCTTCAGTTT
TGGTCTCTCTTTCAAATTCTTAATAGCATTCTGTTTCCAGTATGGTGAGTGCCCTGAAGA
ATCACTGAAGATTGCTGGAAAACGTGATGTTCTAAGGGTTGCATCATGGTCTGAATTGAT
TCAGGTGGCTGCTTCTTCCTTTCAGTGGTTC