morexGenes - Barley RNA-seq Database

Contig contig_203943

Source Contig contig_203943

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_203943 (1608 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_203943

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_29812	1	185 bp	MLOC_29812.1	Available	Available	None
MLOC_29813	1	309 bp	AK370494	Not available	Available	None
MLOC_29814	1	264 bp	None	Available	Available	None

CDS Structure of MLOC_29812

CDS Structure of MLOC_29813

CDS Structure of MLOC_29814

Contig Sequence (1608 bp)

>contig_203943 1608 assembly3_WGSMorex_rbca.fasta
CTCTCCCACCACCTCCGCGCCTCCGCAAGACGGCGTCCAGTGGGCTGAGGCCGCCTCCTC
GGCCGCCCTCCGCGTCCCCCTTCCGTGCACGAGGGGAGAATAGTCTAATCGGCCCAGTGC
GCACCACGCCTACCGCCACCTAGCTCCACTCTCGCCACTGGATCAATCAGGATCCCCCTC
GGGTTCGCTCCGTCCAGCTAATCTGGTCGGCCTTTGCTGGTTCTGGCCGCGGTCTGAGCC
GAGAGGATTCAGGAGGGGAGCGAGGGGAGGCATGGAGCACAACAGGGAGGAGTTCTTGGA
GCAGTTCGGAGGCGAATACGGCTACCCGGACGCGCCCAAGGGCGTCGACCAGATTCGGGC
CGCCGATTTCAAGCGCCTCCAAGGTGCGGATCCATTCATGGTTCTGTCAATTTTTATTCT
TGTCCCGTGTAGAAAGTATGATTCTTGAGCTGAGAGTGATGGCGCCGCTGTTCCCCGGGT
GCGACTACGAGCACTGGCTCATCGTCATGGACAAGCCCGGCGGCGAGGGCGCCTCCAAGC
ACCAGATGATCGACTGCTACATACAGACCCTCGCCAAGGTCCTCGGAAGGTACTCCCCAC
CCGCCGTGCACCCCTCACCGCTACCTGCATGCTGCTGCCGTTGCATCTAATCATGAACGA
TGCTTCCATAACAGCGCCGATCGGCCAGTCTCCGATGTAGTGATACTGTCTTAGACAAGA
TGTACTGAAACTGCTTGCCTCTGTTAGGTTATTACTAGTGTCCATTTTTGGTGCAATCCC
TGGTCCCTGTATCTTGTGGACATGTCTGCCTGCTATCAAGTGCGCGGTTTCAGCAAACTT
GTGTCTTGTTTGGGTTGGACGACTAGTTCCACGGTAGTTTCTGTTGAGTATTGTTTGTGT
AAGCCTGATAAGCCGATACTGTTCCATCTTTGCATTCTGCGACAGCGAGGAGGAGGCCAA
GAAGAAGATTTACAACGTCTCGTGTGAGCGCTACTTTGGGTTCGGGTGTGAGATTGATGA
AGAGACATCCAACAAGCTTGAAGGTTCGTCTGAGCTAACTTGTCCTGTTTCTCCTTCTGG
TAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTAAATACATCTGTTGGTTTGTGCTGCA
GGTATTCCTGGTGTTCTTTTTATGCTCCCTGATTCCTATGTTGACCCTGAACACAAGGAC
TATGGAGGTAATTCTGGACATATTATACATATCCCGCAACCATCTTTTCCTGCCTTTTTG
TTTAAACAATGCCATGTTAAGTTAAAAACTTCATGTCGATGATAAGCCATTTGTGGAAGG
GAGTTAGTCTATAACATTCTCTGTGGGATTAGAGATGCTCAAGTCGACAACCATTTTAGA
TTTTTCAAGGTTACAGACTTGCAGTACAGAAGTACATCTTGTTTTTTTTCAACCAGCAAG
ACATGTGTTGTCCATTAGCATTTAAATGATTCCATCTTGGTTATCCGATGCAGCATTATG
GGCGGTATCATTGATTTAATTGCTAATAAACCTGTAGATGGTCATGCACGTGAGTAGATT
TCTTTTATCATGAAACATACATCCTCTTTCAGTACAACCCATGGTGCT