| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_203542
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_29768 |
9 |
1471 bp |
MLOC_29768.3 |
Available |
Available |
LOC_Os08g06440.1, FRAME:+2, EVALUE:2e-79, 13108.m00654 protein secretory carrier-associated membrane protein 5, putative, expressed |
CDS Structure of MLOC_29768
Contig Sequence (4161 bp)
>contig_203542 4161 assembly3_WGSMorex_rbca.fasta
AAGCGGATCCGGAGGCGGCGACCTCGGATCTCGCCGGATCTGGCCGTAGGAGGGGCCAGC
AGCGAGGTCGGCGCGGGGCTAGCGCTGCGGCGGAGGGGCAAGGCTGGGCCGCAGCGAGGC
TAGGCGCCCTGTGTGCGGTAGGTGCTCCGGGCGCAGACGCGGTGCGGTTGGCGGCAGCGG
AGCGCACGAGGCAGCGAGGTCGCCGGAGGGCGCGGCGGCGGGGTCGCCAGGGAGAGTAGA
GGGGCGAGCGGGGCGAGTGGCAGCGCGGGGTGGCCAGGAGCCCGAGCTGCCGGCGACGGA
CGAAACAATTCGAGGGGGTTTTTGAAAATTTCGAACGATGTTTGACCGGTCAACTCAACA
GAATACGGAGCTATACGCGAGGAGTGACATTATAATCACCACAACTCGTATTCAATGACC
GTATTAAGCGTATTCTAAAGTCCAGTAATCGTATTATGCTTGGCCTCAACTTTAGTGACT
GCTAGTGTATTTATCTCTTTAATATTTTGACAGCATTTTGAAAGATGCATCTGTTGTGCA
GCGGGTGTCACCATCGAAGTGAAAAATTGGCCACCAGTTTTTCCCATCATACATCATGAC
ATAGCCAATGAAATACCAACCCATGCTCAACAGTTGCAATATTCGGCATTTGCTAGTTGG
CTAGGTACTTCACCTCCCAACCGTTTTCTCCAATTACTTGAGATTATTGCTGATAGTTTT
TACGTTTGTTCACCGGTTGCCCTTTTTGCAGGAATTATTGTATGTCTCAGTTGGAATGTA
TTTGCTGTCTTAGTTGAATCAATTCACGGGGAAGGTGCTAAATATTTTGCATCACGAACA
AATTTTTCCAGTGTGCATCTTTTTTTCTTATCTTTCTTATGGCAGATATTGTTCTTTTTC
TCCTCTCCATCATCTATGCGACGTTTGGATGTCCTCTTTCATACATTCTATGGTACAGAC
CTCTGTACCAAGCCATGAGGTTTCTTTTTTAACTACCAGCTCCAAGTAAATAATTGCTCA
GACAATGCTCTGTGCAAGTGTATAATTGCTGACTGGTTTCTCTTGTTTTGTAAGCCAGAA
CTGATAGCGTGGTGACATTTGCCCAGTTTTTCGTCTTCTACCTGGTAGTTTTATCTACTT
AGCTGAGTTATGTATGCTAATAATCTAAACATCTGATTCTATTGCATTTTTCTCGATATT
TATCTTTCACCCCTAATGTGAGATGAGCACAATGACGGCTCGATATGTGACAGGTGCATG
TTGGATTTTGTGTTATTGCTGCAATTGCTCCGCCGATAATATTCATGGGGAAAACCCTTA
CGTAGGTCTAATAACTACAGTGATGTTTTCTTGTTAAGTTTCCAACTGCAATAGTTCAGT
ACTGTTTCTTTACCTGAATCAGGGGAATTCTTGTGGCTATCGAGGTTTTAAACACGGATA
TGTTTGGCGGGGTACGTTCGTCTGCATTACATTATTATGGTTAACTATGAACATAACTGC
AGTGATGTAACTTGCCATGGGCCTTAATTCTTTTCTGTTTTGGAGCAATGCAGGTACTTT
ATCTAATTGGATTTGTATTGTTCACGGCGGAATCTCTTATAAGCATTTGGGTGCTTGAGG
TTGATGCCCATTTCATCTCCTAATTTCTTTCAACATTTCTATTGCCATAAAAAAATTTGG
CCTGGTTGTTACTACTATGTCTCTTATGAACTTGCTTGGTTGTGACGAAGCTTCAAAATT
GGAGTCTAGTTTGCATGACTTATTCTTTGTCCACTTGCATTCATTTTTGTAAGTGACATC
GTGATAGAAGGAAGAAAAATAATATTAAATTATATTTGGATGCTTCCTTATTTCCTAATC
TTGTGCAACTACTAGAATGATCAGCTTTTGCTGCGTTTTTTCTCGAACTATTACACACAC
AATTATTGAATCCACGCAACTTTCCTGCATGGCTTGGTGACATCCTTAAGGTTTACTCCT
ACTATTTTGCAGAGAGTATACATGTATTTCCGAGGGCACAGATGAAGCCTAGCAATGAGA
CGAAGAAATCATTCAAGACAACTGTCTCCTCAATAGCAAGCATTCTTGATGTTTCACAAA
GTTGACGGTGAATGTTGATGAACTGTTTCTGCCGAATTCTTGCATATTCAGACATACAAT
GGAAAATGATTTTATCTCATAGTAGAAATGTGAATCAAGATAACAACTACTACTCCCTCC
GTCCCAAAATATGTGTCTCAAGTTTGTACTAGCTTTAGTACAATGGCGAGCGACAAAAAC
AACCCCAACATCAACCGCAAAATGATAGGAAAATTTAGGGCGGCGCTCGACTCGGCTAGC
CTTAGAGAGATCAAGTGTAAAAATCACAAATACACTTGGTCCAACGAGGAGGAAGACCCA
ACAATGCTTAGCATCGACAAATTCTTCTGCAACACGGAATGGGACTGCCTCTTCCCTTCA
AATCTCCTTTATGCAGCGTCGACCTCCTGCTCGGATCACTGCCCCCTCCTTCTCGTGGCA
TCTAGGGCCCCGTTTAGGCCGGGGCGGTTCAAATTTGAGTCTTTTTGGCCGAAATTCCCG
TGGTTTCAAACGACGGTACTGCGTGCTTGGCAAAGACCGGTGACTTCCTCATGTGCGTTC
AAACACGTTGACACAAGAATGCATCGAGTAGCTAGTGACTTAAATATTTGGGCAAAAGGC
TTCTGCAGCGAAACTAAGCTGCAACTGCAGTTGGCTATCGAGATTGTTCTTCGTCTCAAC
GTTGCCCAAGAGAAAAGAATCCTCTCCCCAGCCGAACACAACCTCCGCAAACTCCTAAAA
ACTAGGATCATGGGGCTGGCGGCGATCGAGAGAGCACGTAGACGCCATGCCTCCTGCGTG
ACATGGCTCCAGGCTGGGGACGCCAAGACGGCCTTTTTCCAGGCCAAGATGAATTCCACA
CGGCAAAAGAACTTCATCCACTCGTTGCACACGAATACATCCATCGCAACCAGCCACATC
GACAAAGCATCGACCTTCCATGAGCATTTCTCGTCCTCCATAGGTAGCATGGCGCATACA
AACACAAGCATAAACTGGGAAGCTTTAGAGTTACCATCCCTCACGGCAGGAGGACTCAAC
AACCCGTTCACAGAGGAAGAGGTCTAGAAGGCGATCTGCATTTCCCCTCAGGAAAAATCC
CCGGGGCCAGACGGATTCAATGGATTGTTCTTCAAATGTTGTTGGGATACTATCAAGACA
AATATCATGGCAGTGTTTGACCAATTCTACCACCTGGCGGGAGGGGACTTCGCACGGCTC
AATGAAGCCTCGGTGGTTCTACTACCAAAGAAGAACGAGGCGAGGAGCGTGCATGATTTC
AGACCCATCAGTCTGATCCATTCGGCCGCCAAGCTAACCTCCAAGGTGTTATCTATTAGA
CTAGGGGCGGTGATCCACCATTTAGTCTCTCCCGCGCAGTCGGCCTTCCAGCACAGCAAA
CGCATCCACGACAGCTACCTCTTCGTGCAAAATACGGTGTGCTCCCTGCACCGCAAGAAA
GTCCCGGCCATGGTGATGAAAGTATACATAGCAAAAGCGTTCGACACGGTATCTTGGGAA
TACCTACTAGAGTTGTTGCAGCAGTTAGGCTTCAGCGCCAGATGGAGGGGTTGGGTAGCT
TTTCTTATGTCATCCGCATCATCGTATGTTCTGCTAAACGGTGCTGCGGGTGAAAAATTC
TGGCATAGATGCGAAGGCAGGGAGACCCCCTCTCCCCCTTCCTCTTCTTAATTGCCATTG
ACCCGCTCCACCACCTTCTCTCCGCCACCACGGAGCAAGGACTGCTGCAACCCATCCCAG
GCCGTAACAACATACTACATGTTAGTCTGTATGCCGACGACGTAGTCATCTTCGTAACCC
CACAGTGACAAGAGATCACTGTTGGGGAACGTTGCATGGGNNNNNNNNNNNNNCCTACGC
ACACGGAGACCTATCATGGCGATGTTCATCTAAGAGAGGAGATTTGGATCNNNGTACCCT
TGTAGATCGCACAGCACCAAGCGTTAAGAAACGCGGTCGATGTAGTGGAACATCATCACG
TCCCTCGATTCGCCCCGCGCACCGTCCCGCCATACGTCCCACGATCCGCTCCGCTCTCTT
CTCCCACGAACACCACCTCCC
