Map Locations of contig_201365 (7894 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_201365

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_29530 5 2707 bp AK366489 Available Available None





CDS Structure of MLOC_29530






Contig Sequence (7894 bp)

>contig_201365 7894 assembly3_WGSMorex_rbca.fasta
CGGTGGAGGAGGCAATCATGATGCCCGCCAGCCACGACAGTAGTCGGTTACACAGCAACC
AAGCTGTTGCTGCTGCTGTTCGTGCTCCGTGTCTGGTTTCTGACTAGGCCCCCACTCCGG
CCTCTGCCTTGAACAAGTCCGGATCGCTCGTCGACTTTGTACTCTCAAGTTTCTCTCGAT
CTGCAGCTAAGCTTCCACTGGCAACAGGAACCATTGCCGCCAACCTTATCCCTATGGAAC
CGGTATGAAACTAACAGGACGCCACTGCTCCGGCGACAAGGAAACAACCGCCGCCACCCA
AACCCCATGCCGACCCGCCGCCCCTATCTCTCCTTCCACGTAAACCCTAGAACTGCTTCG
CCTCCATGCCACTTCAATTGGTTTGTGTTCCAGAACTGAATAAGGGTGCACACCAAGAAC
AGATCAAGCAGAATATATGGAACGGAATTAGCATTTCTCAATCAGATCTGGAACCGCGCA
ACGCCAACCGCGATGAACGGCGGATCCCCCCTATGCAACCCCGCCCCACCCCTCTGCAGC
TGGCGACCAGATTGACCGGATCGACCCCGCCCAACCCACCATCTCCGCAAGGGGGAACAA
GAGAGTGGACTCACCGGAGTTGTCGGGCGCCGGCGCCGCCGCGGATCCGCACTTCGTCGC
GCGGGGTTGAGCTCGCGAGATCCTCCCTTCGTCACGCGGGATTGAGCAGGCGGGATCCGC
CTTCGTCGCACAGGATTAAGCTCACAGGCGCGTGGGAGAGGAATGGGCGTGGGAGGGGAA
GGAACTCGTCGCTAGTAAAAAAATGTTGAAATTTAAACAGTAACCGGTGGGCGGTCGCTC
GCGACGCGTGCAGCCGCATGATTTTTTGCGCGAATCGTGATGAGACGCCGCATAGGAAGT
CCGCCGTGCGGCGCCTCTGGTTAGATTTTCCCTTTTCTATTTAGCGTCACAGATGCCGGC
TCCTTCGCTTTTATGCAAACCTGCGCCTGCAAGCACGTGAGTTGGACCGGCCCATCTAAG
CTCTCTTTTCTCTATTTTTGATAGATAAAAACAAAGCTATGTGAACATGATTTGAACCGG
CAACCAACCTTGCCAAATTACCACCACCCACACGGGATCTGTTAAAAATGAACTTATTCT
CTCTTTTATTACTTCTTTTACCTTTTGCATTTTTATTTTTCTTTTTTTCGTTTTTTGTTT
ACTGTTTTCTTTCTTTCTTTTCATCCTGGTTCCTTTAATTGTTTGCAATACGTGAACTTT
TTGTTTTAAATATATAATATTTTTGGACTGATGGAGTTTTCCTAAAACTTGATGAACTTT
TTCCAAATCGATGAATTTATTTTCAATTTTTCTTTTCAAATCAATGAACTTATTTTCAAT
TTTCATTAAGATTTTTTCAAATTCTATGAATTTTTCTAATTTTGATGAAAGTTTTCCTAT
ATCAGGGAACGATTGTGAACTGTTTTTCAAATTGGATGAACTTTTTTAAAAAATCCGTGA
ATTAATTTAAAATTTAATGAATTTTTTCCAAAATCAGTGAACTAATTTTCAAATTTGATG
AATTTTTTTCAAAATCAGTGAACTAATTTTCCAATTTGATGAACTTTTTCCAAAATCAGT
AAACTAATTTTCAAATTTGATGAAGTTCTTTCCAAATCAGAGAACTAATTTTTAAATTTG
AAGAACATTTTCAAAATCAGTGAACTAATTTTCAAATTTGACGATTTTTTTCAAAATCAG
TGAACTAATTTTCAAATTTGATGAACTTTTTTCAAAATCAGTGAACTCATTTTTAGTTTT
GAGGTTTTTTTTCAAAATCAATGAACTAATTTCAAATTTGATGATTTTTTTTCAAAATCA
ATGAACTGTTTCTCAAAATCAATAAATTATTCCCAATTTTTGAAAATTGATGAATTGTGG
TTTTCAAAATCAAAGTCTTTTTTCAAATATTGTGAACTTTTTAAAAAAATCAATGAATTC
TTTCTAATTCGTGAACTTTTTTGAATACATAAACCTTTTAATATTTCGTGATTATTTTTT
AAATCAGGTAAGTTACAGTTTTTATTCACATTATTGTTTCAGATGGAATCTCATTTTTTA
ATGTATGTGTAATAAATGGTTATGTACCGCTGTTTCTAAATATTCAGCGCTGTAATTAAT
CACTATCGGCTAGTTGCTCTATTGGTTTGGCTACATGCACTGTGTCTGAACAGCGTGTGT
TAGATACCTCACAGGAGAACCGGTTTTTGAGAGTTTTGTCGTTCTATTAATGTGCTTCGT
TTTACTGGGCCGGCCCACCTAGGTCCGCTGCAGGCACCGTTTGCCTAAACCAGCGCATAA
GGCGCTGTATAGGAGCTCCCCTTTCGAAAGCCTTCCAACGATCACCCACGTGTCGTCACT
TGACGTGTTCCCGGTCGTCACTATGTGTCATGCTCTGGACGTTTCTTTCAGATTTTATTT
TTATTTATTTTTCTACATGCGTTTTCGGTTTTTAGGTCCTTTTTTTCCAGGTTTTTTCGG
TGTTCCGGTTTTCCACCGGTTATTCTTAGCTTTTCAACGAAAAAAATTCAAAAAAGTGCG
AAAAAACGCATTTTCTTTTTTCTTTCTCGAGATGCATGGTTTTGCTTCCGCGAGAGGCAT
GTATTTGCTTCTGTGAGAGGCACCATTTTGCTTTTGCGAGAGGCATGTATTTGGTCCTTA
GTGCCTCTCGAAAACGAAAAAACATGTGTTTTATGTTTGTTTGTTTTTTGCGAGAAGCAT
GATTTTCCTTTTATGAGAGGCACGGATTTGCTTTCATGAGAGGCCGTGCCTCTCGGAAAT
AGAAAAAATAACGCATTTTTTCATGAGAGACACAGTTTTGCTTCTGCGAGAGGCACAAGT
TTTCTTCTGCGTGAGGCACGATTTTCTTTCATGAGAGGCACGATTTTCTCCTTCTGATTT
TTTTCTTCCTTTTTTGTGAAAAGAAAATCATCAAAACCTACCAACATCAGATCTAGTTTT
AAAAATCTCGACGCGAGAAATCCAATCGTGAAAATGATTCGAGATTTAGACATATGATTT
AGGAGATAAAACATTTTAAAAATACGGATGTATAAAAAAAGAAAAACTCCCATGTTGTCG
CAACCGGGAAAGGTAAAAATGATCTTTAAAAGAAGTACTCCTCAATTAGTGATTTCGGAA
GATGATCAATGCGTAAAACAAAGTTTCTATGATCTCAGATTTTGTAATCGGCACAGTACC
CGAGTAGCTCATTTTCCAGCAGCATATGGTTGTACTCTGAATATTGGGGATGAGCTATAT
GCAGACAATGTAATCTCGAATGTCGGGGATCCGTCCATTAAAGAGCTGTTCGGCAACCCT
CCAGCTCCATGAAATCTGAGAATCAACAGCAACCCTCCAGCTCCATGAAATCTGAGAATC
TGCGGAGTACCTCTTGTCCAGCTCTGCAATTTTTACCTGTTGCTCCTCCAACTCCGGGAG
TGGAGATGCGGAGTGGAGGACGTCCAAACAGGCCTTAAGTAATCCAACAATTGCATTTTT
TTTAGAATTAAGAAAAAAGCCCACACAGTTCTTTACAGGTGTATTTGGCTGCCATATGGC
ATTCCAAGCGGTGCCTTACATTATGGACTTTTATCTTGATATATATTTTCTCTGTATTTA
AATAATTATAGCTGGAGAAAAATAATCTAGTCGAGTATACATCAACAGTGCAGATGTTTC
CAAAAAAAACAGTGCAGATCAAAATAACAAATGAGTGCTGTCGTATGTCTGAGATGTCTA
CATGAATTTAGAACATAAGAATTTCCAAAATTATGCCCTAGGAAGATTTCAGTGAATGTG
ACACGGAAACAGGTATCTTTTGAAAGGAATCAATAGGAGGATAGTATCATACAGCGCACA
GTACATTTGAAGAAAAAAAAAGTTCTATGTACAGAAGGAAAGAAGAAAACTATTCCCTCT
GTAAATAAATTATAAGAGTGTTTAGATCACTATTTTAGTGATCTAAACGCCCTTATATTT
CTTTACGGAGGGAGGAATAGATTCTGAGTGCTTCCTCTTTGCTCTGGTTAACCAATGCAA
CTTCTTTCCCAAGCTTGGGTCAAACCAAACACACCAGCATCAGTACGATGAGCACAGAGA
AAAAAATGCAAGTTAAAATGCTTGTTCAAATGCTTTTTGTCAGAGCACAGGCCGCCTGAT
CATTCACACACAAAAGGTAAGAGGATTTAAAGGTGCTCGGCATTAGTTCGTTTCTTGACA
GAATCATGGTACAAGATATCTTTGCTGCGACCAGCAGACTGCCAAATATATAGTTCAAAT
GATGCTGTGAATCTGTAACAGAGATATGCTGCCAAGTATCGTAAAAACATTCTAATGAAT
CGCCGCGACGAATGATTCCTAAAATCTTTTGGTGCTTGGTATATGTTTCCTATATTATTA
CCTGTTCTGGCTTTCAAGTTGCTGGGACCTTCCTGTTGGGCTCAAAGACATACTTGATCA
ATGAGTCTTTGATCGATAGCAGCTCGGGGAACTCTCTCTTCAGCTTTGCCGCGTCCATCT
CGTTGTTGCTCCGAGGTGCAACTATGACCTTGGCCTGTTCTTCCAGCGTGAAGTTTGTCC
ACTTGTAGCTGGGATCCATGTACTTCTTGTACATCTCCAGAATTTCATTGTGGCTGACCA
CACCAGGATTGGTGAAGTTCCAGATGCCCCGCAAGTTCCTTTTTGCCATCTCAACTGAAA
TCGGCAAAAGCTCATCCAACACAGTCATGCTGTTTGGGATGTTTACCACCTTGTCGTAAC
GGCTAATCTTTGTGATGAAGTTTCGGGGATTGTTGAGGTCAGACGATATCGGCATCCGGA
CTCGCAGAGTGCAGACATTCTCGTACTCCTTCAACAGTTCCTCAACCTGCATTGTCCAGG
GAACAAATAATCAGAAGTTTGTTCCACTGTTTGCATCTTAACTTTTTTAAAGCATAATAT
CACCACACAGATAAAATACTAACAAAGTAGTCATTACAGAAGGGAAGAAGCAGTTACCAT
TGCCTTGGTCTTTGAGTAGAATGAACCAGTGAAGTTTGGTTTATTCTCTTCTTTGAAGCC
GATGCCCGATCCTTCAGGATGATTTGCATCATATTCGAATATGCACCCAGTGGCATAGTT
TATCACCAATAACCCATGCTCCCGACAAACATCAGCTAGAGTCAAGGTGCCCACAACATT
GGTACGTATGGTGTCTGGCTTGTGAGACTCACACCAATCAACATTGGGTCTGCCAGTAAC
ACCAGCAGCATTGAAGACATGTGTTGGCTTAACAGTTTGGATATCAAGGACAATGGAAAA
GCGCTCTTCCAAGCGACCTTTTCCATATTCATATGGAATTCCTTGTTTCTCGCATATTTT
GCCAAGAAGTCCACCAATCCATCCTGTCCGGCCATATATCAAGAACTTGAGCGAACGAGT
TTGGGAAGAACCTTCTGATGTTGGAGCCACCATCTTCGTTTGATTGTTAGTAAACAGATT
TAGCATTCCTTTAATTTCCTCAGAGCCCTCACACCCAGGCATCATCAGTGTCCTCGGATG
AGGCAACAGTGCACCAGAAACATCACCCCAATAGTCAGAATTGGCTACATACCATTCCAT
GGTCTTCCTCAGGCCCTCCTCCCATCTAGTGCGCTCAGACCACCCAAGACTCTTGAGCTT
CTCATCATCCAAGAAATACCTCTGATCATTGAAAGGTCTATTATCGACAAACTGGATTAC
TTTATCAGCTTCAAGATTGAAAAGCCTGCAGACATCCTTTGCAACATCAGTGACTGTCCT
CTCTCTCTTTGTTCCAATGTTGTAAACATGTCCAACTTCTCCACGATGAAGAATGACTTC
AAAAGCCTCAGCAACATCCTCACAATAGAGGTAGCTTCGGACATTGGATCCATCACCATG
AATTGGGAGGGGCTTTCCTCTCATAGCCAAAAGAATGAACTTCGGAATAAGCTTTTCAGG
AAACTGGTTAGGACCATACACATTATTTCCCCGGGTAGTGATGACCGGCAGACCATAGGA
TCTCCCATAAGCCATGACAAGCATCTCTGCTCCAGCTTTGGTGGCTGAATAAGGATTTGT
GGGGAGCAGCTGTGAGGCCTCATGGTTGCCAACCACTGCATCCTCATCAGTCTCGCCATA
GACCTCATCAGTGCTAACGTGGATGAACCTCCTGATCTGCCCAGTGACCTTGCAAGCTTC
AAGAAGAACATGAGTACCGTAAATGTTGTTCTTGGTGAATTCAAAGGAGTTACCAAAAGA
ATTGTCAACATGTGTCTGGGCTGCAAAGTGCATTATTGTATCGATGTTCTCTGTGACCAG
GAGGAAGTTGACAAGATCAGCACTTGCAATATCGCCCTTGACAAACTTGAAGTTCGGTGA
CGAGCTGGCAGGGAGAAGGTTCTTCAGATTGGAGCAGTAATCAAGCTTGTCAAGGACGAC
AATCTTGTAATCAGGGTAGTTCCGTACAATGCGGTTTGTGACATGGGAAGCGATGAAACC
AGCAGCTCCTGTAATGAGGATGCTCTTAGGTGTGTAGGGTGTCGCCATATCGGACTGTAA
TTTCTGGAATCCTGTTGTACAAGTAGAGTATTTAAAAGGATTAGACAAGATACAGTTTGA
TATAGCCTATATAGAATGAAACAAATGATAATTAATAAGTAGAATATTACTATATATTAT
CTTTTGAACTGTCAGAACATAATAGATAATACAATGAGAAACTGAACCCAGCTCTCCTGT
AGAAAGAATTCGGAGAGACCAGGAAGGCCAGTCTCGTCCTCTAAGGTCAATACATAAATG
GGCAATTGCATCTATTTCTCACAGACCAGAGTGCATGATCCAACAACTACAAGCTCAAAA
CTAAAACTCTGGGAATTTTAACAAAAAAATGTGGAGAAATGCAGTCATGCAAAACAGGCA
CACTCCGCCCTTTTGTATGCAGCAGCAAGATAATTGGTTACAAATATCAAAGCTGAAAGT
AGAATTTACGAGTGCATGATAATGTATCGAGTGTTATTTCCCATCCAGATAAAACAAAAA
TGTGAATCAAATTTGATTAAGATCATGCCATCCCTATTTAGAAACAACAAAACATTGTAG
TTGGAACCGCAACATGGAACTCTTGCATTTTCAAGAGAACCACACAGGGGATTGATGATG
CATCGATGTGAATTCAGATATTCATGCTATCCTATCAAACCACAATATGAAAGAAATACT
CACTGTAAAGACATTTTCACTGACAGATCATGGAAAACAATACTGTAGTAGATAATAGAC
AGGAACGTGCGCCAAATCCTAGATAAGTAGACATCCAATGTTACTTTCTAGACCAAGATC
TGAACCTGTTCTGCAAGTACATACTCTACTAGTTATTTGTCGTTTCCACATCTGGCAGTC
CACGTGCCAACAATTATCACTAAAGCATACTCGAGCAGCTAGAACTTGGTCAAACATAGC
GGACCACTATCACTGGATCTTACGAAGGGGCCGAATTTTGAGATCTTGGACTGATCTACA
GACGAGGGAGCGGAAAAAAAAACTACACTACAGCTGAACATGGCCATCGATCTGGGCTAA
GACGCGACTTGGGATCTCATCTTCCTTTCTTTTCTGATGGATCTGAGCACGGTCTCCGGC
ATTCTTGGAACCGTCGCGGCAAAATCGACAGACGGGGAGATGGCATCCGGAGCACGCAAG
GAACCCGATCCGGGCTTGGCAAAGAAGCAAACACCTGCCGCGCGTTGCAACGCAATGCGA
GACGGCCGCGAGGCTCACCTCAGCCGTCGGCTGCGGAGGCGGGCGTCGGCCCATCGGAGG
CTGTGGCCCGCGCGCGCGCGAGAGAGAGAGAGAG